Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058227
CDS Infomation

pacid=37444504 polypeptide=PGSC0003DMP400039182 locus=PGSC0003DMG400022609 ID=PGSC0003DMT400058227.v4.03 annot-version=v4.03
Sequence

ATGGGTGAATCCATTGTGGAGACTACTGCTGTCAAGCACAAGATGGGTGACTCAGTTGTG
TCTCATCCTACACTTGAAGTGTCAGTTTCTTTTGGAAGGTTTGAGAATGATGCACTTTCT
TGGGAGAAATGGTCATCTTTCTCCCCTAATAAGTATCTGGAAGAAGTTGAAAAGTGTTCA
ACACCTGGATCAGTAGCTCAGAAGAAGGCCTATTTCGAAGCACACTACAAGAGGATTGCT
GCTAAGAAGCTGGAACAATTAGAGGAGGAAACACGGCAAGTAGAACAGAAAATGGAACCT
CTGTGTCCAGAAGTAGCTGAGCCCAAATCTGGAGATGTGACAGAAAATGGAACCTCTGAT
GGTGATTTCAGTTCATCCAAGGGTGAGAGATCTTCTGTAGATGAGCAGCAAATGTCAGTG
GTAGAGTTGAAGAATAGTGATGCAGTGGATGAACCAAAGGAGGATATTACTGTTGATGTG
GAGTGTGATAACTTATTGGTTACCAAAGCTAAGGAACTTACTATCTCAGGAATTGATGAG
TCAAAGGATGATATTTCTGTTGATATAGAGTGTGTTAGTCCATTTGCTACTGAAGCTAAG
GAAGGAACTGTATTGGGGATCGATGAGTCAAATGAGGATATTTCTGTTGATGTGGAATGT
GATAACTTAGTGGTTACTAAAACTAAGGAAGAAACTATTTTGGGAACATGTGATCAAGGA
GAATTTCATAAGGTTGAAGAGCGGAATCCTGAAAAAGGATGTCAAGTTAGTGTAGTAGAG
ACTCCACAAGCAAATACTGAAGCACAAAAAGCCTCTCTTAAGAAAAGCAAGACCCCTAAT
GCAAATGTAAAGAATGTGCCGCGAAAGGCATACACTCCAGAGGCTCGGGTATCCGTTGGA
ACAAAGAAGAAACTGACATCACCTGTGGCAAAATCCTCAAGAATTTCCACTCCAACATCT
AAGCAAGCGCCAACTTCTAAGGTCGTTACTCCATCTCAACCATCAGCAAAGAAGGTGAAT
GGAATGTCAACTCAAAGAAGTAATAATACTCCTTTGGTACAACACAAGAAACTAGTTCCT
GGGTCATTTGTGTCGCCTTCTCAATCCTCAAACAAAAAGTTGAATGGAGCAACACTTTCT
CAATCCTCAAACAAAAAGATGAATGGAGCGACGCCTTCTCAATCCTCAAACAAAAAGTTG
AATGGAGCAACACCTTCTCAATCCTCAAACAAAAAGTTGAATGGTGCAATGTCTTCTCAA
TCCTCTAACAAAACGTTGAATGGTGCAGCATTGCAAAGGAGTGTAAATTCTCCAGTGCTA
GAGGACAAGAGAGTAGTTCCTACATCATTACACATGTCTCTCCGTTTGAGTTCCCCAAAT
TCTACAGCTTCTACTAATACAATGAGAAAATCTTTGTTCATGGAAACGATGGGAGACAAG
GATATTGTCAAACGAGCATTTAAGGCATTTCAGAATAGTTTTAGCCAAGGAAGATCTGCT
GGAGATATGACATATGATGTACAAGATCAGGTGTCGTCAAAAGGATCCGAGCAGAAGATT
TCACTTTCTTCGACTCAGAAGGAGAGTGAGAGATTAAGGAAGACACCAGATAAGGTAATC
ACTCTAAAAGGCCAATCGACGACTCGTTCAACCTCTTCGTCATCAGGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039182
PEP Infomation

pacid=37444504 transcript=PGSC0003DMT400058227 locus=PGSC0003DMG400022609 ID=PGSC0003DMT400058227.v4.03 annot-version=v4.03
Sequence

MGESIVETTAVKHKMGDSVVSHPTLEVSVSFGRFENDALSWEKWSSFSPNKYLEEVEKCS
TPGSVAQKKAYFEAHYKRIAAKKLEQLEEETRQVEQKMEPLCPEVAEPKSGDVTENGTSD
GDFSSSKGERSSVDEQQMSVVELKNSDAVDEPKEDITVDVECDNLLVTKAKELTISGIDE
SKDDISVDIECVSPFATEAKEGTVLGIDESNEDISVDVECDNLVVTKTKEETILGTCDQG
EFHKVEERNPEKGCQVSVVETPQANTEAQKASLKKSKTPNANVKNVPRKAYTPEARVSVG
TKKKLTSPVAKSSRISTPTSKQAPTSKVVTPSQPSAKKVNGMSTQRSNNTPLVQHKKLVP
GSFVSPSQSSNKKLNGATLSQSSNKKMNGATPSQSSNKKLNGATPSQSSNKKLNGAMSSQ
SSNKTLNGAALQRSVNSPVLEDKRVVPTSLHMSLRLSSPNSTASTNTMRKSLFMETMGDK
DIVKRAFKAFQNSFSQGRSAGDMTYDVQDQVSSKGSEQKISLSSTQKESERLRKTPDKVI
TLKGQSTTRSTSSSSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400058227
Transcript Infomation

pacid=37444504 locus=PGSC0003DMG400022609 ID=PGSC0003DMT400058227.v4.03 annot-version=v4.03
Sequence

ATGGGTGAATCCATTGTGGAGACTACTGCTGTCAAGCACAAGATGGGTGACTCAGTTGTG
TCTCATCCTACACTTGAAGTGTCAGTTTCTTTTGGAAGGTTTGAGAATGATGCACTTTCT
TGGGAGAAATGGTCATCTTTCTCCCCTAATAAGTATCTGGAAGAAGTTGAAAAGTGTTCA
ACACCTGGATCAGTAGCTCAGAAGAAGGCCTATTTCGAAGCACACTACAAGAGGATTGCT
GCTAAGAAGCTGGAACAATTAGAGGAGGAAACACGGCAAGTAGAACAGAAAATGGAACCT
CTGTGTCCAGAAGTAGCTGAGCCCAAATCTGGAGATGTGACAGAAAATGGAACCTCTGAT
GGTGATTTCAGTTCATCCAAGGGTGAGAGATCTTCTGTAGATGAGCAGCAAATGTCAGTG
GTAGAGTTGAAGAATAGTGATGCAGTGGATGAACCAAAGGAGGATATTACTGTTGATGTG
GAGTGTGATAACTTATTGGTTACCAAAGCTAAGGAACTTACTATCTCAGGAATTGATGAG
TCAAAGGATGATATTTCTGTTGATATAGAGTGTGTTAGTCCATTTGCTACTGAAGCTAAG
GAAGGAACTGTATTGGGGATCGATGAGTCAAATGAGGATATTTCTGTTGATGTGGAATGT
GATAACTTAGTGGTTACTAAAACTAAGGAAGAAACTATTTTGGGAACATGTGATCAAGGA
GAATTTCATAAGGTTGAAGAGCGGAATCCTGAAAAAGGATGTCAAGTTAGTGTAGTAGAG
ACTCCACAAGCAAATACTGAAGCACAAAAAGCCTCTCTTAAGAAAAGCAAGACCCCTAAT
GCAAATGTAAAGAATGTGCCGCGAAAGGCATACACTCCAGAGGCTCGGGTATCCGTTGGA
ACAAAGAAGAAACTGACATCACCTGTGGCAAAATCCTCAAGAATTTCCACTCCAACATCT
AAGCAAGCGCCAACTTCTAAGGTCGTTACTCCATCTCAACCATCAGCAAAGAAGGTGAAT
GGAATGTCAACTCAAAGAAGTAATAATACTCCTTTGGTACAACACAAGAAACTAGTTCCT
GGGTCATTTGTGTCGCCTTCTCAATCCTCAAACAAAAAGTTGAATGGAGCAACACTTTCT
CAATCCTCAAACAAAAAGATGAATGGAGCGACGCCTTCTCAATCCTCAAACAAAAAGTTG
AATGGAGCAACACCTTCTCAATCCTCAAACAAAAAGTTGAATGGTGCAATGTCTTCTCAA
TCCTCTAACAAAACGTTGAATGGTGCAGCATTGCAAAGGAGTGTAAATTCTCCAGTGCTA
GAGGACAAGAGAGTAGTTCCTACATCATTACACATGTCTCTCCGTTTGAGTTCCCCAAAT
TCTACAGCTTCTACTAATACAATGAGAAAATCTTTGTTCATGGAAACGATGGGAGACAAG
GATATTGTCAAACGAGCATTTAAGGCATTTCAGAATAGTTTTAGCCAAGGAAGATCTGCT
GGAGATATGACATATGATGTACAAGATCAGGTGTCGTCAAAAGGATCCGAGCAGAAGATT
TCACTTTCTTCGACTCAGAAGGAGAGTGAGAGATTAAGGAAGACACCAGATAAGGTAATC
ACTCTAAAAGGCCAATCGACGACTCGTTCAACCTCTTCGTCATCAGGGTAA