Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058222
CDS Infomation

pacid=37442999 polypeptide=PGSC0003DMP400039177 locus=PGSC0003DMG400022606 ID=PGSC0003DMT400058222.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTCAACTCAAACGCCCTATTGTTGTTTCGTCTCGTGGTGAACCTTCTGGGCAA
TCTCCAATGATGGGGGGAAGTAGTGCGAACAAGCTAACAACAAACGATGCGCTTTCCTAT
CTAAAGTCAGTGAAGGAAATCTTTCAGGACAGAAGGGACAAGTATGATGAGTTTCTTGAT
GTCATGAAAGATTTCAAGTCTCAAAGAATTGATACTTCTGGTGTCATAGCGAGGGTGAAG
GATTTATTCAAAGGGCATCGAACCTTAATTTTGGGTTTCAATACATTTTTGCCCAAGGGA
TATGAGATCACTAATCCAGAGGATGAAGCTCCAGTGAAAAAGCCAGTTGAATTTGAAGAA
GCAATCAGTTTTGTAAACAAGATAAAGACTAGATTTCAAGGCGATGATTTCGTATATAAG
TCGTTTCTTGATATTTTGAATATGTATAGAAAGGAAAACAAGGCTATTGCAGAAGTTTAT
AATGAGGTCTCCTACCTTTTCCGTGGCCATGCTGATTTGCTTGAAGAGTTCACCCACTTT
TTACCTGATGCCATGGCAGCAGCCCGAGCTCGTAATGCTCAAGCTCATAGGGCCCCTATC
ATGCGTTATGATGAGAAAAGCTCTTCAATGACTGCAGCAAGGCACATGCATGTCGAGAAG
AAGGCTACTTCACTAGTTGTCCGGGAGAATGCTGTTGATCGGTCTGATCCAGAATATGAA
GAAACAACGATGAGAACTGAAAGGGAAAGAAGGGAACGACAGTATGAGGATAGAGAGCTG
GACAGAAAATCTGTTCATAGAGATGTTGCTGTTGACCAGTTTGAACCCAGTATGCAGGAC
CATGGCTTTGCTTACTGTGAGCGGGTTAAGGAAAGGTTACAGGATATGGGAGATCGAAAA
CAATTTTTTAAGTGCCTTAATTTCTATTGCAAGGAAGGAGTTACAAGAACACAATTACAA
TCCGGGGTTAGCAGCTTACTTCAGAAACATCCAGATCTCATGGACGGATTTGATGAATTT
ATTTCTCATTGTGAGAGGACAGATGGATATCTTGCTGCTATTCTGAGCAAAACACAGTCC
TTATGGAGTGATGAACCCAATCCCAAGTCTGAGAAAGTAGAAGACAGGGACAAAGACCGA
GATTGCGAGTGGGAAGAAAGGAATAGAGTTCATGAGACAAGAGAAAGAGATAGACCTGAA
AGACCCATTGCCTATGCTACTAGAGATGCACAAGGGCAGAAGATGTCCCTGTATACAAGC
AAGGATAAATACGCAGCAAAACCTATACATGAACTTGATCTCTCTAACTGTGACAGTTGC
TCCCCAAGTTATCGGCTTCTTCCAAAGAATTATCCAATTCCTTTAGCGAGTCAGAAAACA
GATATTGGTGCCGAAGTATTAAATGATCACTGGGTATCCGTAACATCAGGAAGTGAGGAT
TACTCTTTTAAACATATGCGCAAAAACCAGTATGAAGAAAGCTTGTTCCGATGCGAAGAT
GACAGGTTTGAGCTGGATATGCTTTTAGAGTCTGTCAATGCAACAACAAGACGCGTTGAA
GAATTGCTCAACAAGATCAATGATAATACTATTTCGAGTGATAGTCATATCCGTATTGAA
GAACATTTTACTGCTCTGAATCTAAGGTGCATTGAACGTCTTTACGGTGACCATGGGCTT
GATGTTATGGATGTGTTGAGGAAGAATGCACCACTTGCCCTTCCAGTTATACTTACTCGC
TTAAAGCAGAAACAAGAGGAGTGGGCGAGGTGTCGTTCTGATTTTAATAAAGTTTGGGCT
GAGATTTATGCTAAGAACTATCACAAATCACTGGATCATCGTAGCTTTTATTTCAAGCAG
CAGGACACAAAAAGCTTGAGCACTAAAGCACTGCTGGCTGAGATCAAAGAAATTAGTGAA
AATAAATGCAAAGAAGATGATGTGCTGCTATCTGTTGCTGCTGGAAATGGGCAACCAATT
ATCACACATCTGGAGTTCGAGTATCCTGATTCTGACATCCACGAAGACCTTTATCAAATC
ATCAAGTATTCATGTATAGAAGTTTGTACAAGAGAACAGTTGGATAAAGTCATGAAGATT
TGGACCACCTTCCTGGAACCAATATTTGGTGTTCCTCGTCAGCCTCAGGGTGAAGTGGAT
GGTGTAGATGTTGAAAAGGCAAAAAATCTTAATGCTAAAGATAAAACAGCAATTGAAGGG
AAAAGGGTTGGTAGCCCTGCTAGTGGCTCGGGCATGAATTGCAGACAAAGCAGTTCCAGG
AATGGAGATGAACTGCCTACATCTGAGCATGTAATTTCTTCCAGAGTTCAGATAGCAGAT
GGTGAAAATGGGTTTAAGGATGATAGCTCTCCCAATGTAAATGGTGTAATGCTGAAAATC
GTAACTTCAAAGAACCTCCTTCATCATGGAAAGTCAGATGCTAATCTAAATATGGCAGAT
GGGGCATCTGGTCTCAGCAGAGAGTCTTTTTGTGCCGACCAGCTAGTGCTTTCAAACAGC
ACTACTGTGGGGGAAAGCCATGGAAGAGTCTGTATAGAAACTGCTTCAGGGCATGGTGCA
GGCACTTCCAGACCTAGTGGTTCCACAATCAAACGTGAACCTGAGATAGTATCGTCTAAT
GACTCAAAGGACGGAGGGTTCGTGGACCCAAAGGCAGAAGGTATCAAAGTTGAGAAATGT
CTTGAAGAATCCGTAGGAAAATGTAAACTTGAGCGAGAAGAGGGTGAATTAACTCCAAAT
GGTGATTTTGAGGATAATTCTACACCATCGAGTGAAGGTGGTCAAAATGTATCGCATAGT
TTAAAGGGAAGTTCAAGTAGTAAGCTGTACCAAAGTGGACATGGAGAAGAAAAAATTTGT
GGTGGAGACAGAGGACGTGAGAATGATGCTGATGAAGAAGGGGAAGCGAGTGCTCATGGG
ACATCAGATGACAGTGAGAATGCTTCTGAAAATTGTGATGTTTCAGGTAGTGAGTCTGCT
AATGGAGAAGGTTCTCATGAAGAGCGTGAAGAAGATGGGGACAATGATGTGAATGATAAC
AAGGTAGAGAGTGAAGGAGAGGTGGAAGGTACTGCTGATGCCCATGATGCTGAAGGAGAT
GGTGCTGTTATGCCATTTTCAGAACGCCTTCTACATACATCCAGGCCTCTAACCAAGCAC
GTTCCTTCTATATTTCATGTCAGGGAGAAGGAATCACGTATATTTTATGGAAATGATTCA
TTTTATGTGCTGTTCAGACTTCACCAGACATTGTATGAAAGACTACAGAAAGCAAAATCA
CATTCTTCATCAGCTGAACACAGATGGAGAGTCTCGAATGCGATCAACCCCACTGAATCA
TATTCCAGATTCAGGAGTGCACTTTATAACCTGCTTGATGGTTCCTCTGACAATGCAAAG
TTCGAGGATGACTGCCGAGCTATTATTGGGGCTCAGTCATATCTTCTCTTCACCTTAGAC
AAGCTGATATACAAAATTGTCAAACAGCTTCAGACAATTGCAACTGATGAGTTGGAAGGT
AAACTTCTCCAACTATATACATATGAAATCTCAAGAAATTCTAGCACATTTTCAGATGTA
GTTTACCATGAAAATGTGCGTGCCCTTCTTCATGACGAGACCATATACAGAATAGCATGT
TCATCTAAAACAACACGTCTATCCATACAACTCATGGACTATGTTTATGATAAGCCTGAG
ATGTCTGCTGTTACAATGGACCCAAATTTTGCAGCTTATATGAGCAATGAACTCCTCTCT
GTTATTCCTCAGAAGGAGAACCCTGGGGTGTTCTTGACAAGAAATAAACGGAAGTCAGGA
GTTAGAGATGAAACTTTTACATCCGAGGCTATGGAAGGACTTAAATTTTTTAATGGTCTA
GAATGTAAGATAGCATGCAGCTCATCAAAGGTCTCTTACGTCTTAGACACTGAAGATTTC
TTGATACGTTCAAGAAAAAGGCGAAGAATATTAAAGGAGAATCTTTTGTCTAATGGCCAT
TCAGAGTGTTTGAACAGGTCCAATAAAATACAACGTTTCCGCAGATTGCTTTCAGTTGAA
CATGCGCATTTTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400039177
PEP Infomation

pacid=37442999 transcript=PGSC0003DMT400058222 locus=PGSC0003DMG400022606 ID=PGSC0003DMT400058222.v4.03 annot-version=v4.03
Sequence

MSSQLKRPIVVSSRGEPSGQSPMMGGSSANKLTTNDALSYLKSVKEIFQDRRDKYDEFLD
VMKDFKSQRIDTSGVIARVKDLFKGHRTLILGFNTFLPKGYEITNPEDEAPVKKPVEFEE
AISFVNKIKTRFQGDDFVYKSFLDILNMYRKENKAIAEVYNEVSYLFRGHADLLEEFTHF
LPDAMAAARARNAQAHRAPIMRYDEKSSSMTAARHMHVEKKATSLVVRENAVDRSDPEYE
ETTMRTERERRERQYEDRELDRKSVHRDVAVDQFEPSMQDHGFAYCERVKERLQDMGDRK
QFFKCLNFYCKEGVTRTQLQSGVSSLLQKHPDLMDGFDEFISHCERTDGYLAAILSKTQS
LWSDEPNPKSEKVEDRDKDRDCEWEERNRVHETRERDRPERPIAYATRDAQGQKMSLYTS
KDKYAAKPIHELDLSNCDSCSPSYRLLPKNYPIPLASQKTDIGAEVLNDHWVSVTSGSED
YSFKHMRKNQYEESLFRCEDDRFELDMLLESVNATTRRVEELLNKINDNTISSDSHIRIE
EHFTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRSDFNKVWA
EIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISENKCKEDDVLLSVAAGNGQPI
ITHLEFEYPDSDIHEDLYQIIKYSCIEVCTREQLDKVMKIWTTFLEPIFGVPRQPQGEVD
GVDVEKAKNLNAKDKTAIEGKRVGSPASGSGMNCRQSSSRNGDELPTSEHVISSRVQIAD
GENGFKDDSSPNVNGVMLKIVTSKNLLHHGKSDANLNMADGASGLSRESFCADQLVLSNS
TTVGESHGRVCIETASGHGAGTSRPSGSTIKREPEIVSSNDSKDGGFVDPKAEGIKVEKC
LEESVGKCKLEREEGELTPNGDFEDNSTPSSEGGQNVSHSLKGSSSSKLYQSGHGEEKIC
GGDRGRENDADEEGEASAHGTSDDSENASENCDVSGSESANGEGSHEEREEDGDNDVNDN
KVESEGEVEGTADAHDAEGDGAVMPFSERLLHTSRPLTKHVPSIFHVREKESRIFYGNDS
FYVLFRLHQTLYERLQKAKSHSSSAEHRWRVSNAINPTESYSRFRSALYNLLDGSSDNAK
FEDDCRAIIGAQSYLLFTLDKLIYKIVKQLQTIATDELEGKLLQLYTYEISRNSSTFSDV
VYHENVRALLHDETIYRIACSSKTTRLSIQLMDYVYDKPEMSAVTMDPNFAAYMSNELLS
VIPQKENPGVFLTRNKRKSGVRDETFTSEAMEGLKFFNGLECKIACSSSKVSYVLDTEDF
LIRSRKRRRILKENLLSNGHSECLNRSNKIQRFRRLLSVEHAHFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400058222
Transcript Infomation

pacid=37442999 locus=PGSC0003DMG400022606 ID=PGSC0003DMT400058222.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTCAACTCAAACGCCCTATTGTTGTTTCGTCTCGTGGTGAACCTTCTGGGCAA
TCTCCAATGATGGGGGGAAGTAGTGCGAACAAGCTAACAACAAACGATGCGCTTTCCTAT
CTAAAGTCAGTGAAGGAAATCTTTCAGGACAGAAGGGACAAGTATGATGAGTTTCTTGAT
GTCATGAAAGATTTCAAGTCTCAAAGAATTGATACTTCTGGTGTCATAGCGAGGGTGAAG
GATTTATTCAAAGGGCATCGAACCTTAATTTTGGGTTTCAATACATTTTTGCCCAAGGGA
TATGAGATCACTAATCCAGAGGATGAAGCTCCAGTGAAAAAGCCAGTTGAATTTGAAGAA
GCAATCAGTTTTGTAAACAAGATAAAGACTAGATTTCAAGGCGATGATTTCGTATATAAG
TCGTTTCTTGATATTTTGAATATGTATAGAAAGGAAAACAAGGCTATTGCAGAAGTTTAT
AATGAGGTCTCCTACCTTTTCCGTGGCCATGCTGATTTGCTTGAAGAGTTCACCCACTTT
TTACCTGATGCCATGGCAGCAGCCCGAGCTCGTAATGCTCAAGCTCATAGGGCCCCTATC
ATGCGTTATGATGAGAAAAGCTCTTCAATGACTGCAGCAAGGCACATGCATGTCGAGAAG
AAGGCTACTTCACTAGTTGTCCGGGAGAATGCTGTTGATCGGTCTGATCCAGAATATGAA
GAAACAACGATGAGAACTGAAAGGGAAAGAAGGGAACGACAGTATGAGGATAGAGAGCTG
GACAGAAAATCTGTTCATAGAGATGTTGCTGTTGACCAGTTTGAACCCAGTATGCAGGAC
CATGGCTTTGCTTACTGTGAGCGGGTTAAGGAAAGGTTACAGGATATGGGAGATCGAAAA
CAATTTTTTAAGTGCCTTAATTTCTATTGCAAGGAAGGAGTTACAAGAACACAATTACAA
TCCGGGGTTAGCAGCTTACTTCAGAAACATCCAGATCTCATGGACGGATTTGATGAATTT
ATTTCTCATTGTGAGAGGACAGATGGATATCTTGCTGCTATTCTGAGCAAAACACAGTCC
TTATGGAGTGATGAACCCAATCCCAAGTCTGAGAAAGTAGAAGACAGGGACAAAGACCGA
GATTGCGAGTGGGAAGAAAGGAATAGAGTTCATGAGACAAGAGAAAGAGATAGACCTGAA
AGACCCATTGCCTATGCTACTAGAGATGCACAAGGGCAGAAGATGTCCCTGTATACAAGC
AAGGATAAATACGCAGCAAAACCTATACATGAACTTGATCTCTCTAACTGTGACAGTTGC
TCCCCAAGTTATCGGCTTCTTCCAAAGAATTATCCAATTCCTTTAGCGAGTCAGAAAACA
GATATTGGTGCCGAAGTATTAAATGATCACTGGGTATCCGTAACATCAGGAAGTGAGGAT
TACTCTTTTAAACATATGCGCAAAAACCAGTATGAAGAAAGCTTGTTCCGATGCGAAGAT
GACAGGTTTGAGCTGGATATGCTTTTAGAGTCTGTCAATGCAACAACAAGACGCGTTGAA
GAATTGCTCAACAAGATCAATGATAATACTATTTCGAGTGATAGTCATATCCGTATTGAA
GAACATTTTACTGCTCTGAATCTAAGGTGCATTGAACGTCTTTACGGTGACCATGGGCTT
GATGTTATGGATGTGTTGAGGAAGAATGCACCACTTGCCCTTCCAGTTATACTTACTCGC
TTAAAGCAGAAACAAGAGGAGTGGGCGAGGTGTCGTTCTGATTTTAATAAAGTTTGGGCT
GAGATTTATGCTAAGAACTATCACAAATCACTGGATCATCGTAGCTTTTATTTCAAGCAG
CAGGACACAAAAAGCTTGAGCACTAAAGCACTGCTGGCTGAGATCAAAGAAATTAGTGAA
AATAAATGCAAAGAAGATGATGTGCTGCTATCTGTTGCTGCTGGAAATGGGCAACCAATT
ATCACACATCTGGAGTTCGAGTATCCTGATTCTGACATCCACGAAGACCTTTATCAAATC
ATCAAGTATTCATGTATAGAAGTTTGTACAAGAGAACAGTTGGATAAAGTCATGAAGATT
TGGACCACCTTCCTGGAACCAATATTTGGTGTTCCTCGTCAGCCTCAGGGTGAAGTGGAT
GGTGTAGATGTTGAAAAGGCAAAAAATCTTAATGCTAAAGATAAAACAGCAATTGAAGGG
AAAAGGGTTGGTAGCCCTGCTAGTGGCTCGGGCATGAATTGCAGACAAAGCAGTTCCAGG
AATGGAGATGAACTGCCTACATCTGAGCATGTAATTTCTTCCAGAGTTCAGATAGCAGAT
GGTGAAAATGGGTTTAAGGATGATAGCTCTCCCAATGTAAATGGTGTAATGCTGAAAATC
GTAACTTCAAAGAACCTCCTTCATCATGGAAAGTCAGATGCTAATCTAAATATGGCAGAT
GGGGCATCTGGTCTCAGCAGAGAGTCTTTTTGTGCCGACCAGCTAGTGCTTTCAAACAGC
ACTACTGTGGGGGAAAGCCATGGAAGAGTCTGTATAGAAACTGCTTCAGGGCATGGTGCA
GGCACTTCCAGACCTAGTGGTTCCACAATCAAACGTGAACCTGAGATAGTATCGTCTAAT
GACTCAAAGGACGGAGGGTTCGTGGACCCAAAGGCAGAAGGTATCAAAGTTGAGAAATGT
CTTGAAGAATCCGTAGGAAAATGTAAACTTGAGCGAGAAGAGGGTGAATTAACTCCAAAT
GGTGATTTTGAGGATAATTCTACACCATCGAGTGAAGGTGGTCAAAATGTATCGCATAGT
TTAAAGGGAAGTTCAAGTAGTAAGCTGTACCAAAGTGGACATGGAGAAGAAAAAATTTGT
GGTGGAGACAGAGGACGTGAGAATGATGCTGATGAAGAAGGGGAAGCGAGTGCTCATGGG
ACATCAGATGACAGTGAGAATGCTTCTGAAAATTGTGATGTTTCAGGTAGTGAGTCTGCT
AATGGAGAAGGTTCTCATGAAGAGCGTGAAGAAGATGGGGACAATGATGTGAATGATAAC
AAGGTAGAGAGTGAAGGAGAGGTGGAAGGTACTGCTGATGCCCATGATGCTGAAGGAGAT
GGTGCTGTTATGCCATTTTCAGAACGCCTTCTACATACATCCAGGCCTCTAACCAAGCAC
GTTCCTTCTATATTTCATGTCAGGGAGAAGGAATCACGTATATTTTATGGAAATGATTCA
TTTTATGTGCTGTTCAGACTTCACCAGACATTGTATGAAAGACTACAGAAAGCAAAATCA
CATTCTTCATCAGCTGAACACAGATGGAGAGTCTCGAATGCGATCAACCCCACTGAATCA
TATTCCAGATTCAGGAGTGCACTTTATAACCTGCTTGATGGTTCCTCTGACAATGCAAAG
TTCGAGGATGACTGCCGAGCTATTATTGGGGCTCAGTCATATCTTCTCTTCACCTTAGAC
AAGCTGATATACAAAATTGTCAAACAGCTTCAGACAATTGCAACTGATGAGTTGGAAGGT
AAACTTCTCCAACTATATACATATGAAATCTCAAGAAATTCTAGCACATTTTCAGATGTA
GTTTACCATGAAAATGTGCGTGCCCTTCTTCATGACGAGACCATATACAGAATAGCATGT
TCATCTAAAACAACACGTCTATCCATACAACTCATGGACTATGTTTATGATAAGCCTGAG
ATGTCTGCTGTTACAATGGACCCAAATTTTGCAGCTTATATGAGCAATGAACTCCTCTCT
GTTATTCCTCAGAAGGAGAACCCTGGGGTGTTCTTGACAAGAAATAAACGGAAGTCAGGA
GTTAGAGATGAAACTTTTACATCCGAGGCTATGGAAGGACTTAAATTTTTTAATGGTCTA
GAATGTAAGATAGCATGCAGCTCATCAAAGGTCTCTTACGTCTTAGACACTGAAGATTTC
TTGATACGTTCAAGAAAAAGGCGAAGAATATTAAAGGAGAATCTTTTGTCTAATGGCCAT
TCAGAGTGTTTGAACAGGTCCAATAAAATACAACGTTTCCGCAGATTGCTTTCAGTTGAA
CATGCGCATTTTGCATAG