Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058204
CDS Infomation

pacid=37442718 polypeptide=PGSC0003DMP400039162 locus=PGSC0003DMG401022600 ID=PGSC0003DMT400058204.v4.03 annot-version=v4.03
Sequence

ATGGATCCACAAGCTTCCATGATGAACCACGCCGGAGGTTTTCAGTCTCCGCCGTTTAAT
TTATCTGAGATCTGGCAGTTTCCGATCAATGCAGGTGAAGGCGAGACGCCGTATAGTTTT
CCGTCGTCTACGGCGGCGGCGCAGCAGAATGTGAGTGATGTTCCGAATAATGATCCCATG
GTTCTAGACCGGAGAACAACTAATTACAGCGGCGGTGGTGGTGGTTCAGCTAGGAAGCGA
AACGAGGATGATGAATCAGCTAAAGGAGTTTCCACTAGCGGCAATGGCTTGACTGAATCT
GCTAGTAAGCGGATGAAGGTTACAAGATCAAATGAGAATTGCGAATCTAGAGGTGATGGG
GAAGGGAATTCAGGGAAATCTGCAGAACAACCTGCAAAGCTTGCTGAACCACCAAAAGAT
TACATTCACGTGCGAGCAAGGAGGGGTCAAGCTACTGATAGTCACAGTCTAGCAGAAAGA
GCTAGAAGAGAGAAGATAAGTGAGAGGATGAAAGTCCTCCAAGATATAGTCCCTGGTTGT
AATAAGGTTATTGGCAAAGCTCTTGTTCTTGATGAGATAATAAATTATATTCAATCATTA
CAACACCAGGTTGAGTTCTTATCGATGAAGCTTGAAGCGGTTAATTCAAAAATGCCAAGC
ATAGAAGGATATCCATCTAAAGATTTCGGACAGCAGCCATTTGATACAAATGCTATGACA
TTCGGTTCACAAGCTACTAGGGAATATGCCAGGGGAACATCACCAGATTGGTTGCATATG
CAGCTTGGTGGAGGATTTGAAAGAACAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039162
PEP Infomation

pacid=37442718 transcript=PGSC0003DMT400058204 locus=PGSC0003DMG401022600 ID=PGSC0003DMT400058204.v4.03 annot-version=v4.03
Sequence

MDPQASMMNHAGGFQSPPFNLSEIWQFPINAGEGETPYSFPSSTAAAQQNVSDVPNNDPM
VLDRRTTNYSGGGGGSARKRNEDDESAKGVSTSGNGLTESASKRMKVTRSNENCESRGDG
EGNSGKSAEQPAKLAEPPKDYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGC
NKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSKMPSIEGYPSKDFGQQPFDTNAMT
FGSQATREYARGTSPDWLHMQLGGGFERTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400058204
Transcript Infomation

pacid=37442718 locus=PGSC0003DMG401022600 ID=PGSC0003DMT400058204.v4.03 annot-version=v4.03
Sequence

ATGGATCCACAAGCTTCCATGATGAACCACGCCGGAGGTTTTCAGTCTCCGCCGTTTAAT
TTATCTGAGATCTGGCAGTTTCCGATCAATGCAGGTGAAGGCGAGACGCCGTATAGTTTT
CCGTCGTCTACGGCGGCGGCGCAGCAGAATGTGAGTGATGTTCCGAATAATGATCCCATG
GTTCTAGACCGGAGAACAACTAATTACAGCGGCGGTGGTGGTGGTTCAGCTAGGAAGCGA
AACGAGGATGATGAATCAGCTAAAGGAGTTTCCACTAGCGGCAATGGCTTGACTGAATCT
GCTAGTAAGCGGATGAAGGTTACAAGATCAAATGAGAATTGCGAATCTAGAGGTGATGGG
GAAGGGAATTCAGGGAAATCTGCAGAACAACCTGCAAAGCTTGCTGAACCACCAAAAGAT
TACATTCACGTGCGAGCAAGGAGGGGTCAAGCTACTGATAGTCACAGTCTAGCAGAAAGA
GCTAGAAGAGAGAAGATAAGTGAGAGGATGAAAGTCCTCCAAGATATAGTCCCTGGTTGT
AATAAGGTTATTGGCAAAGCTCTTGTTCTTGATGAGATAATAAATTATATTCAATCATTA
CAACACCAGGTTGAGTTCTTATCGATGAAGCTTGAAGCGGTTAATTCAAAAATGCCAAGC
ATAGAAGGATATCCATCTAAAGATTTCGGACAGCAGCCATTTGATACAAATGCTATGACA
TTCGGTTCACAAGCTACTAGGGAATATGCCAGGGGAACATCACCAGATTGGTTGCATATG
CAGCTTGGTGGAGGATTTGAAAGAACAACATAA