Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058197
CDS Infomation

pacid=37444347 polypeptide=PGSC0003DMP400039157 locus=PGSC0003DMG400022597 ID=PGSC0003DMT400058197.v4.03 annot-version=v4.03
Sequence

ATGAATAAGTTGCTCTTCTCATTCATTTGTCTCCTTTTGTATAACTTCATATCTCCATCT
TATTCACTCCCTTTATGCACAGATTTGAGAGCACCTGTTATTCCAAAAAAGGCTTTGGCT
TTTTGTCCTTATAATGGAAGAGTATGTTGTGACTCTTCTAAAGATGTGCAATTGCAGAAG
GCTTTTGAGGGTATGAAAATATCTGATACTACATGTAGTTCTGCTGTCAAATCAATACTT
TGCTCAACATGTGATCAGTTCTCAGCAGAGTTGTTTAAGGTAAAATCAGGGCCAAGACCA
GTTCCTGTTCTTTGCAATTCAACTGATGCATCAGCAAGCAGTTTTTGTTCATCTGTTTGG
GATTCATGCCAAAACATACCAATAACAAATTCTCCTTTTGCACCATCCTTGCAAACCAAA
GCAGGAGGGACAAAAAACTCAAACTCCTCCTTGCTAACAGACTTCTGGCAATCGAAAGCC
GATTTCTGTGAAGCATTTGGTGGAAACTCAGATAAAGATTCATTATGTTTCAATGGAGAA
CAAGTTTCACTCAAGAAAAACGAAACTTTACAGACTCCGAATGGGATGTGTTTTGAGAAG
ATTGCTGATGGAGCTTACCTCAACATGGTCCCTCATCCTGATGGATCGAACCGAGCATTC
TTTTCCAATCAGGCTGGAAAAATTTGGTTAGCAAGTATACCAGATCAAGATTCAGGAGAA
AGCATGGGGATTGATGAATCAAGTCCATTTGCTGATTTGACAGATGAGGTTTATTTAGAT
GCAAGATATGGGATGATGGGGATGGCTTTTCATCCAAATTTTGCTAAGAATGGCAGGTTT
TTTGCTTCATATAACTGTGACAAAGCTAAGTCCCCTAGCTGTGCTGGAAGATGTGCTTGT
AATTCAGATGTTGGTTGTGATCCTTCTAAGATAAACTCAGATGATAATAAGCAGCCATGC
CAATACCATTCTGTTGTTGCAGAGTTCAGTGCTAATGGGACTGCACCAAATCCATCATTG
GCAGAGAAGGTGAAACCATCAGAAGTGAGGAGAATATTTACAATGGGGCTTCCATTCACA
GCTAATCATGGAGGACAAATACTCTTCGGCCCTGAAGATGGATATCTCTACTTTATGATG
GGAGATGGTGGAAGCAAGGGTGATTCTTTCAATTTTGCTCAAAATAAGAAGTCATTGCTT
GGAAAAATAATGAGGGTTGATATTGATAACATACCAAGTCAAGAAGAAATATCAGACCTT
GGACATTGGGGTAACTATACGGTTCCTCGAGATAATCCTTATTCACAAGATAAGGATTTG
CAGCCTGAAATCTGGGCGCTAGGACTGAGAGACCCTTGGCGCTGTAGCTTTGATTCAGAA
AGGCCTTCTTACTTCATCTGTGCAGATGTTGGCCAGGATCAGTATGAAGAAGTTGACATC
ATCACGAAAGGGGGAAACTATGGATGGAGCATGTATGAAGGTCCTTTACGCTTTAAAAAT
GCTTCAGCTGATGATTTCATGGATCCCATCTTCCCAGTGTTAGGATACCGTCATTCTGAT
ATAAATAAAGAAGTTGGATCTGCAGCCATATCAGGTGGCTATGTTTATCGATCCAAGACT
GATCCCTGCATATATGGAAGTTACCTCTATGGCGATTTGTATGCTAAGAACTTTTGGGCA
GCTCAAGAAAATCCGTATAACAGTGGGAACTTTACAGCAAGAGGCATTTCTTTCCGTTGT
GCTCATGATTCCCCTCTCAATTGCAGCTCAGTTCCCAATAGTCCATTGCCTGCTTTAGGT
TACATATTCTCATTTGGACAGGATAACAGGAAGGATACCTATGTTTTAACAAGCACCGGT
GTATACAGAGTGGTTCGTCCAAGTCGCTGCAACTACACTTGCTCGATGGAGATAGCAAGG
ACTGCTGAGAGCCCAGGTCCCTCTGCACCTTCAGATGGTCACGTTGCTAAAGCAGATCTC
TGCTCGGTCCTTGTTCTTTACTGTCTGCTGCTTTTGACTAGCTTCATCCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039157
PEP Infomation

pacid=37444347 transcript=PGSC0003DMT400058197 locus=PGSC0003DMG400022597 ID=PGSC0003DMT400058197.v4.03 annot-version=v4.03
Sequence

MNKLLFSFICLLLYNFISPSYSLPLCTDLRAPVIPKKALAFCPYNGRVCCDSSKDVQLQK
AFEGMKISDTTCSSAVKSILCSTCDQFSAELFKVKSGPRPVPVLCNSTDASASSFCSSVW
DSCQNIPITNSPFAPSLQTKAGGTKNSNSSLLTDFWQSKADFCEAFGGNSDKDSLCFNGE
QVSLKKNETLQTPNGMCFEKIADGAYLNMVPHPDGSNRAFFSNQAGKIWLASIPDQDSGE
SMGIDESSPFADLTDEVYLDARYGMMGMAFHPNFAKNGRFFASYNCDKAKSPSCAGRCAC
NSDVGCDPSKINSDDNKQPCQYHSVVAEFSANGTAPNPSLAEKVKPSEVRRIFTMGLPFT
ANHGGQILFGPEDGYLYFMMGDGGSKGDSFNFAQNKKSLLGKIMRVDIDNIPSQEEISDL
GHWGNYTVPRDNPYSQDKDLQPEIWALGLRDPWRCSFDSERPSYFICADVGQDQYEEVDI
ITKGGNYGWSMYEGPLRFKNASADDFMDPIFPVLGYRHSDINKEVGSAAISGGYVYRSKT
DPCIYGSYLYGDLYAKNFWAAQENPYNSGNFTARGISFRCAHDSPLNCSSVPNSPLPALG
YIFSFGQDNRKDTYVLTSTGVYRVVRPSRCNYTCSMEIARTAESPGPSAPSDGHVAKADL
CSVLVLYCLLLLTSFIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400058197
Transcript Infomation

pacid=37444347 locus=PGSC0003DMG400022597 ID=PGSC0003DMT400058197.v4.03 annot-version=v4.03
Sequence

ATGAATAAGTTGCTCTTCTCATTCATTTGTCTCCTTTTGTATAACTTCATATCTCCATCT
TATTCACTCCCTTTATGCACAGATTTGAGAGCACCTGTTATTCCAAAAAAGGCTTTGGCT
TTTTGTCCTTATAATGGAAGAGTATGTTGTGACTCTTCTAAAGATGTGCAATTGCAGAAG
GCTTTTGAGGGTATGAAAATATCTGATACTACATGTAGTTCTGCTGTCAAATCAATACTT
TGCTCAACATGTGATCAGTTCTCAGCAGAGTTGTTTAAGGTAAAATCAGGGCCAAGACCA
GTTCCTGTTCTTTGCAATTCAACTGATGCATCAGCAAGCAGTTTTTGTTCATCTGTTTGG
GATTCATGCCAAAACATACCAATAACAAATTCTCCTTTTGCACCATCCTTGCAAACCAAA
GCAGGAGGGACAAAAAACTCAAACTCCTCCTTGCTAACAGACTTCTGGCAATCGAAAGCC
GATTTCTGTGAAGCATTTGGTGGAAACTCAGATAAAGATTCATTATGTTTCAATGGAGAA
CAAGTTTCACTCAAGAAAAACGAAACTTTACAGACTCCGAATGGGATGTGTTTTGAGAAG
ATTGCTGATGGAGCTTACCTCAACATGGTCCCTCATCCTGATGGATCGAACCGAGCATTC
TTTTCCAATCAGGCTGGAAAAATTTGGTTAGCAAGTATACCAGATCAAGATTCAGGAGAA
AGCATGGGGATTGATGAATCAAGTCCATTTGCTGATTTGACAGATGAGGTTTATTTAGAT
GCAAGATATGGGATGATGGGGATGGCTTTTCATCCAAATTTTGCTAAGAATGGCAGGTTT
TTTGCTTCATATAACTGTGACAAAGCTAAGTCCCCTAGCTGTGCTGGAAGATGTGCTTGT
AATTCAGATGTTGGTTGTGATCCTTCTAAGATAAACTCAGATGATAATAAGCAGCCATGC
CAATACCATTCTGTTGTTGCAGAGTTCAGTGCTAATGGGACTGCACCAAATCCATCATTG
GCAGAGAAGGTGAAACCATCAGAAGTGAGGAGAATATTTACAATGGGGCTTCCATTCACA
GCTAATCATGGAGGACAAATACTCTTCGGCCCTGAAGATGGATATCTCTACTTTATGATG
GGAGATGGTGGAAGCAAGGGTGATTCTTTCAATTTTGCTCAAAATAAGAAGTCATTGCTT
GGAAAAATAATGAGGGTTGATATTGATAACATACCAAGTCAAGAAGAAATATCAGACCTT
GGACATTGGGGTAACTATACGGTTCCTCGAGATAATCCTTATTCACAAGATAAGGATTTG
CAGCCTGAAATCTGGGCGCTAGGACTGAGAGACCCTTGGCGCTGTAGCTTTGATTCAGAA
AGGCCTTCTTACTTCATCTGTGCAGATGTTGGCCAGGATCAGTATGAAGAAGTTGACATC
ATCACGAAAGGGGGAAACTATGGATGGAGCATGTATGAAGGTCCTTTACGCTTTAAAAAT
GCTTCAGCTGATGATTTCATGGATCCCATCTTCCCAGTGTTAGGATACCGTCATTCTGAT
ATAAATAAAGAAGTTGGATCTGCAGCCATATCAGGTGGCTATGTTTATCGATCCAAGACT
GATCCCTGCATATATGGAAGTTACCTCTATGGCGATTTGTATGCTAAGAACTTTTGGGCA
GCTCAAGAAAATCCGTATAACAGTGGGAACTTTACAGCAAGAGGCATTTCTTTCCGTTGT
GCTCATGATTCCCCTCTCAATTGCAGCTCAGTTCCCAATAGTCCATTGCCTGCTTTAGGT
TACATATTCTCATTTGGACAGGATAACAGGAAGGATACCTATGTTTTAACAAGCACCGGT
GTATACAGAGTGGTTCGTCCAAGTCGCTGCAACTACACTTGCTCGATGGAGATAGCAAGG
ACTGCTGAGAGCCCAGGTCCCTCTGCACCTTCAGATGGTCACGTTGCTAAAGCAGATCTC
TGCTCGGTCCTTGTTCTTTACTGTCTGCTGCTTTTGACTAGCTTCATCCTGTAG