Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058195
CDS Infomation

pacid=37443086 polypeptide=PGSC0003DMP400039155 locus=PGSC0003DMG400022596 ID=PGSC0003DMT400058195.v4.03 annot-version=v4.03
Sequence

ATGTCATTGTTACCATTTTTTTCAATCTTTCTGTTCTTGGTTTTCATTCTTGAAGCAGCA
GCAGCAGTTCATAGCTGTTTAAAATCTGAAATCTCATGTCCACCTTTTGCTTCTTTTCCC
CCTTTTCCTTTTTCTTCATCTCCTGGTTGTGGTCATCCTTCTTTTCAAATCCAATGTTCA
CCTTCACATGCTGTTATTTCAATCAATAACTTGTCTTTCTCTTTGCTTCATTATGAGTCT
ACTTCTTCAACTCTTCTTCTTTCTCCAGCTTCACTTTCACAAAATGAAATCAGCTCAGTA
TCTACTGATTTCAAGAACTGTTCTTTGCACCATAGATCCATTTCCCTTTCTGGTTCACCA
TTTAAGGTCTCTGACTCATCTTGTTCTAGGCTTTCTGCTCTTAGGCCTTGTCCACCCACA
AATCTCCCTAATTGTAGTCACTGTCCATGGCAATGTAAACTTATCAAGAACCCACTTCAG
CTTCTGCATGAATGTGGATTGAGACACCATTTTGAGTCTGATGAAAGATGCCAAAGTGAC
ATTCTTGGGTTTCTTGATGAATTCTTGAAAATGGGGATTGAGGTTGAGTGGGATGAAGAA
CAAGATTCATATTTTTCAAACTGTAGGACTTGCAGAGCTAGCAGTGGTGTTTGTGGATTC
AATTCTTCACACCCAAAGAAACCATTTTTATGTTTTCCATCATCACAAGTTAGGTACTCA
CCTCCTTTGATTGGACAAAAAAGCGCGAATCGTGTAGTTATGTTGTCAATGGTCTTTCTA
TTTGTGTGTTTTCTGGTTGTTTTCTCTATTGGATCTTTAATTTTTCGTTCAAGAGGTAAA
GGGGCTGGTTCAGAAGAAGATCCCACTATCATTTACCTTCGTAGGCATCGATTAGCTAGT
TTACTTCCACCAGTTTTCCCTTATGAGGAACTTGAAAGCTCCACAAATCACTTTGATCAC
AAGAGGAAACTTGGGGATGGAGGATTTGGTTCTGTGTACTTGGGGAATCTTGATGATGGT
AGGCTTGTTGCAGTAAAGCATTTGCATAAGCATTCTCCCACTGGTACCAAAGCTTTTTCA
ACAAAGTCATTTTGCAATGAAATCTTGATTTTGTCATCAATCAATCACCCAAATCTAGTC
AAACTTCATGGCTATTGTAGTGATCCAAGAGGGCTTCTTTTGGTTTATGACTATGTTCCA
AATGGTACTCTTGCTGACCATCTTCATGGTAACAAGAATTTGTACAAAAAAGGTTCTTTA
ACATGGACTTTAAGAGTTGATATAGCACTACAAATTGCAATGGCAATTGAGTACTTGCAT
TTCTCTGTTGTTCCACCTATAGTTCATAGAGATATTACATCAACCAACATTTTTGTAGAA
AAAGATATGAGGGTAAAAGTTGGTGACTTTGGGCTTTCAAGACTCTTGGTATGCACAGAT
ACATCAGTGGCATCTGGTGATTCAACTGGTGAAGTTTGGACAGGTCCACAAGGAACTCCT
GGTTATTTAGATCCTGATTATCACAAGTCGTTTAGATTGAACGAAAAAAGTGATATATAT
AGCTTTGGTGTTGTGTTGTTGGAACTAATAACAGGGATGAAAGCTGTAGACCAAAAGAGG
GAGAAGAGGGAAATGGCATTGGCTGATATGGTAGTTTCAAGAATTCAAATGGGGTTGTTG
CAGCAAGTTGTGGACCCTTTTTTGGTGGTGGATGGTGAAGCAATGGAAGGCGTCGGCGCA
GTGGCTGAGCTCGCGTTCCGTTGTGTAGCGGCCGATAAGGATGATCGGCCTGATTCAAGA
GATGTGGTGGCAGAATTGAGAAGGATAAGGGGCAGGACAAGAGGAGTTGGAAGTGGTGGT
ATTTTGAGGACTTCAAATTCTAGTAACATGGTGGTTCCTGATGGGATTGGTCTAATTGAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400039155
PEP Infomation

pacid=37443086 transcript=PGSC0003DMT400058195 locus=PGSC0003DMG400022596 ID=PGSC0003DMT400058195.v4.03 annot-version=v4.03
Sequence

MSLLPFFSIFLFLVFILEAAAAVHSCLKSEISCPPFASFPPFPFSSSPGCGHPSFQIQCS
PSHAVISINNLSFSLLHYESTSSTLLLSPASLSQNEISSVSTDFKNCSLHHRSISLSGSP
FKVSDSSCSRLSALRPCPPTNLPNCSHCPWQCKLIKNPLQLLHECGLRHHFESDERCQSD
ILGFLDEFLKMGIEVEWDEEQDSYFSNCRTCRASSGVCGFNSSHPKKPFLCFPSSQVRYS
PPLIGQKSANRVVMLSMVFLFVCFLVVFSIGSLIFRSRGKGAGSEEDPTIIYLRRHRLAS
LLPPVFPYEELESSTNHFDHKRKLGDGGFGSVYLGNLDDGRLVAVKHLHKHSPTGTKAFS
TKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGNKNLYKKGSL
TWTLRVDIALQIAMAIEYLHFSVVPPIVHRDITSTNIFVEKDMRVKVGDFGLSRLLVCTD
TSVASGDSTGEVWTGPQGTPGYLDPDYHKSFRLNEKSDIYSFGVVLLELITGMKAVDQKR
EKREMALADMVVSRIQMGLLQQVVDPFLVVDGEAMEGVGAVAELAFRCVAADKDDRPDSR
DVVAELRRIRGRTRGVGSGGILRTSNSSNMVVPDGIGLID*

Transcript Sequence

Transcript ID

PGSC0003DMT400058195
Transcript Infomation

pacid=37443086 locus=PGSC0003DMG400022596 ID=PGSC0003DMT400058195.v4.03 annot-version=v4.03
Sequence

ATGTCATTGTTACCATTTTTTTCAATCTTTCTGTTCTTGGTTTTCATTCTTGAAGCAGCA
GCAGCAGTTCATAGCTGTTTAAAATCTGAAATCTCATGTCCACCTTTTGCTTCTTTTCCC
CCTTTTCCTTTTTCTTCATCTCCTGGTTGTGGTCATCCTTCTTTTCAAATCCAATGTTCA
CCTTCACATGCTGTTATTTCAATCAATAACTTGTCTTTCTCTTTGCTTCATTATGAGTCT
ACTTCTTCAACTCTTCTTCTTTCTCCAGCTTCACTTTCACAAAATGAAATCAGCTCAGTA
TCTACTGATTTCAAGAACTGTTCTTTGCACCATAGATCCATTTCCCTTTCTGGTTCACCA
TTTAAGGTCTCTGACTCATCTTGTTCTAGGCTTTCTGCTCTTAGGCCTTGTCCACCCACA
AATCTCCCTAATTGTAGTCACTGTCCATGGCAATGTAAACTTATCAAGAACCCACTTCAG
CTTCTGCATGAATGTGGATTGAGACACCATTTTGAGTCTGATGAAAGATGCCAAAGTGAC
ATTCTTGGGTTTCTTGATGAATTCTTGAAAATGGGGATTGAGGTTGAGTGGGATGAAGAA
CAAGATTCATATTTTTCAAACTGTAGGACTTGCAGAGCTAGCAGTGGTGTTTGTGGATTC
AATTCTTCACACCCAAAGAAACCATTTTTATGTTTTCCATCATCACAAGTTAGGTACTCA
CCTCCTTTGATTGGACAAAAAAGCGCGAATCGTGTAGTTATGTTGTCAATGGTCTTTCTA
TTTGTGTGTTTTCTGGTTGTTTTCTCTATTGGATCTTTAATTTTTCGTTCAAGAGGTAAA
GGGGCTGGTTCAGAAGAAGATCCCACTATCATTTACCTTCGTAGGCATCGATTAGCTAGT
TTACTTCCACCAGTTTTCCCTTATGAGGAACTTGAAAGCTCCACAAATCACTTTGATCAC
AAGAGGAAACTTGGGGATGGAGGATTTGGTTCTGTGTACTTGGGGAATCTTGATGATGGT
AGGCTTGTTGCAGTAAAGCATTTGCATAAGCATTCTCCCACTGGTACCAAAGCTTTTTCA
ACAAAGTCATTTTGCAATGAAATCTTGATTTTGTCATCAATCAATCACCCAAATCTAGTC
AAACTTCATGGCTATTGTAGTGATCCAAGAGGGCTTCTTTTGGTTTATGACTATGTTCCA
AATGGTACTCTTGCTGACCATCTTCATGGTAACAAGAATTTGTACAAAAAAGGTTCTTTA
ACATGGACTTTAAGAGTTGATATAGCACTACAAATTGCAATGGCAATTGAGTACTTGCAT
TTCTCTGTTGTTCCACCTATAGTTCATAGAGATATTACATCAACCAACATTTTTGTAGAA
AAAGATATGAGGGTAAAAGTTGGTGACTTTGGGCTTTCAAGACTCTTGGTATGCACAGAT
ACATCAGTGGCATCTGGTGATTCAACTGGTGAAGTTTGGACAGGTCCACAAGGAACTCCT
GGTTATTTAGATCCTGATTATCACAAGTCGTTTAGATTGAACGAAAAAAGTGATATATAT
AGCTTTGGTGTTGTGTTGTTGGAACTAATAACAGGGATGAAAGCTGTAGACCAAAAGAGG
GAGAAGAGGGAAATGGCATTGGCTGATATGGTAGTTTCAAGAATTCAAATGGGGTTGTTG
CAGCAAGTTGTGGACCCTTTTTTGGTGGTGGATGGTGAAGCAATGGAAGGCGTCGGCGCA
GTGGCTGAGCTCGCGTTCCGTTGTGTAGCGGCCGATAAGGATGATCGGCCTGATTCAAGA
GATGTGGTGGCAGAATTGAGAAGGATAAGGGGCAGGACAAGAGGAGTTGGAAGTGGTGGT
ATTTTGAGGACTTCAAATTCTAGTAACATGGTGGTTCCTGATGGGATTGGTCTAATTGAC
TAA