Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058138
CDS Infomation

pacid=37462644 polypeptide=PGSC0003DMP400039129 locus=PGSC0003DMG400022568 ID=PGSC0003DMT400058138.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCATCTGAAATTGTGTTTCCCGCCTCTACTGAAAACCCTAACAGCAGCAAA
TGGCGATTCACATGGGAAGCTCAATCTCACACTTCAACTCTCCGATTAATCCTTTTCAAT
TCAAATATCAAATCTTGTACCGAAATCACTGTCAATTTATCTGTGGAGAAATCTCTGCTC
ACTGTCTGTTTCGTCGAAGGGGATTCAGTTCGGGTACCAGTTCCTCGGGTTTTAATTGAC
CCGGAAGCTCCGGTTCATTGCAGAGTATTTGATGATCATGTTGAAGTTAAGCTTTCTCTT
CTTCTTCCTGTTGATCATCCGCTCATTTCAGGATTGGATTTATCGGAACCGGAGGAGGAA
AAACCGGACTCAGATACTTTCTTTCCGTTCTCGGTGAATTATGAAATAAAGAAATTATCT
GCTATGGAGGAAGTTCATTTTTACTGCAGAAGTTGCTCAACTAAGTTAACCAAGGGTATC
AGATTATTTAATGAGATGCCATCAGTCGACTGGCAAGATGTTGCAGACAATTGGTTTGGG
ACATGTTGTTGCTCGTTTGGTGGTATAAGTGAACAGCTAGTCATGCAATTTGCAAAGTCA
TATTCTTGTACAACTGGTGTTTGCCTTATAACTGGCGCATCTGTTATCATATGCAAAGAG
GACCTCGTCGGCTGTGAATTTCCTGAGTTGAAAGGGGACCAAACTTATGATTCTCAGGTG
AATTCAGCCAAGGTGACTTCTTTAAGACCTTGTCCTGAGGAAGAAAATAATGGGGTGAAA
CCAAACAATGAAGTTGTTAAAATGATGATTGATGGTGATAGTTCAACATGCATACCTTCA
AAGTTGAAGGATGAAGACAAAATGAAGTCATTGGCTGGAATTTCTTCCGAGGCAAACTGT
GACACTAAAAGCCATAATACTGGCTGTTGTACTAATAATCTTAGTGAGAGCTTTTCAAAG
GAGAAAGAATATGAACTGAATACTGAACTCTTAGATAAGCAGAAAATATTTCTTAAAGGC
TGCCTTGGGGATGCTTTTATGTTGAGACATTCCAATCTTTCCAAAGACGTCAAGTGGATT
GAATTTCTCTGTCCAAAATGTTCATCTCTTATTGGAGCATATCCTTGCTCCAGTGATAAA
GCACCATTAGATGATGGAGTTCGACTATACAAATTTAACATATCTACTTGTTTGCCTGTT
CGTGGATTGAATGATCTATTTAGGGAGTATACTTTGGAAAGGATGTTTTCACGTCAATTG
CTTGAAGCTGCACAAGACGAACTAACATTTCGGACCGTTGTCAGAGATATACACACCAAA
CGTGCACTTTCACAAATTGTTCTCCTTAACCCAAATGCATGGTGCTACAGTGGGTATTGC
ATGCATAACATGGAACCAGTAACCAAGATTAATATGTACCCCGTTGTCAAGCTATTGTTC
TCTGCAAACATCAATGACACGGAACTTGAACCCAGGAACGTAGAAGAATGGGTGGCCAAA
AACCAAGCTGATGAAGTTTTCATGTTGCCATCTCAAGTGAAGGAACTAATTACAAATTTG
GAGATGGCAAATACTATGTTGCCACCTTCACATATGCTGTTACAGGGTTTCTCTATGTCA
TCCTTGAAGAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039129
PEP Infomation

pacid=37462644 transcript=PGSC0003DMT400058138 locus=PGSC0003DMG400022568 ID=PGSC0003DMT400058138.v4.03 annot-version=v4.03
Sequence

MSSSSEIVFPASTENPNSSKWRFTWEAQSHTSTLRLILFNSNIKSCTEITVNLSVEKSLL
TVCFVEGDSVRVPVPRVLIDPEAPVHCRVFDDHVEVKLSLLLPVDHPLISGLDLSEPEEE
KPDSDTFFPFSVNYEIKKLSAMEEVHFYCRSCSTKLTKGIRLFNEMPSVDWQDVADNWFG
TCCCSFGGISEQLVMQFAKSYSCTTGVCLITGASVIICKEDLVGCEFPELKGDQTYDSQV
NSAKVTSLRPCPEEENNGVKPNNEVVKMMIDGDSSTCIPSKLKDEDKMKSLAGISSEANC
DTKSHNTGCCTNNLSESFSKEKEYELNTELLDKQKIFLKGCLGDAFMLRHSNLSKDVKWI
EFLCPKCSSLIGAYPCSSDKAPLDDGVRLYKFNISTCLPVRGLNDLFREYTLERMFSRQL
LEAAQDELTFRTVVRDIHTKRALSQIVLLNPNAWCYSGYCMHNMEPVTKINMYPVVKLLF
SANINDTELEPRNVEEWVAKNQADEVFMLPSQVKELITNLEMANTMLPPSHMLLQGFSMS
SLKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400058138
Transcript Infomation

pacid=37462644 locus=PGSC0003DMG400022568 ID=PGSC0003DMT400058138.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCATCTGAAATTGTGTTTCCCGCCTCTACTGAAAACCCTAACAGCAGCAAA
TGGCGATTCACATGGGAAGCTCAATCTCACACTTCAACTCTCCGATTAATCCTTTTCAAT
TCAAATATCAAATCTTGTACCGAAATCACTGTCAATTTATCTGTGGAGAAATCTCTGCTC
ACTGTCTGTTTCGTCGAAGGGGATTCAGTTCGGGTACCAGTTCCTCGGGTTTTAATTGAC
CCGGAAGCTCCGGTTCATTGCAGAGTATTTGATGATCATGTTGAAGTTAAGCTTTCTCTT
CTTCTTCCTGTTGATCATCCGCTCATTTCAGGATTGGATTTATCGGAACCGGAGGAGGAA
AAACCGGACTCAGATACTTTCTTTCCGTTCTCGGTGAATTATGAAATAAAGAAATTATCT
GCTATGGAGGAAGTTCATTTTTACTGCAGAAGTTGCTCAACTAAGTTAACCAAGGGTATC
AGATTATTTAATGAGATGCCATCAGTCGACTGGCAAGATGTTGCAGACAATTGGTTTGGG
ACATGTTGTTGCTCGTTTGGTGGTATAAGTGAACAGCTAGTCATGCAATTTGCAAAGTCA
TATTCTTGTACAACTGGTGTTTGCCTTATAACTGGCGCATCTGTTATCATATGCAAAGAG
GACCTCGTCGGCTGTGAATTTCCTGAGTTGAAAGGGGACCAAACTTATGATTCTCAGGTG
AATTCAGCCAAGGTGACTTCTTTAAGACCTTGTCCTGAGGAAGAAAATAATGGGGTGAAA
CCAAACAATGAAGTTGTTAAAATGATGATTGATGGTGATAGTTCAACATGCATACCTTCA
AAGTTGAAGGATGAAGACAAAATGAAGTCATTGGCTGGAATTTCTTCCGAGGCAAACTGT
GACACTAAAAGCCATAATACTGGCTGTTGTACTAATAATCTTAGTGAGAGCTTTTCAAAG
GAGAAAGAATATGAACTGAATACTGAACTCTTAGATAAGCAGAAAATATTTCTTAAAGGC
TGCCTTGGGGATGCTTTTATGTTGAGACATTCCAATCTTTCCAAAGACGTCAAGTGGATT
GAATTTCTCTGTCCAAAATGTTCATCTCTTATTGGAGCATATCCTTGCTCCAGTGATAAA
GCACCATTAGATGATGGAGTTCGACTATACAAATTTAACATATCTACTTGTTTGCCTGTT
CGTGGATTGAATGATCTATTTAGGGAGTATACTTTGGAAAGGATGTTTTCACGTCAATTG
CTTGAAGCTGCACAAGACGAACTAACATTTCGGACCGTTGTCAGAGATATACACACCAAA
CGTGCACTTTCACAAATTGTTCTCCTTAACCCAAATGCATGGTGCTACAGTGGGTATTGC
ATGCATAACATGGAACCAGTAACCAAGATTAATATGTACCCCGTTGTCAAGCTATTGTTC
TCTGCAAACATCAATGACACGGAACTTGAACCCAGGAACGTAGAAGAATGGGTGGCCAAA
AACCAAGCTGATGAAGTTTTCATGTTGCCATCTCAAGTGAAGGAACTAATTACAAATTTG
GAGATGGCAAATACTATGTTGCCACCTTCACATATGCTGTTACAGGGTTTCTCTATGTCA
TCCTTGAAGAGATAA