Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058126
CDS Infomation

pacid=37463999 polypeptide=PGSC0003DMP400039123 locus=PGSC0003DMG400022562 ID=PGSC0003DMT400058126.v4.03 annot-version=v4.03
Sequence

ATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAATAGCAATACCCCTTCAACC
AACAATACCGCCACAAACACAAACACAACGGTAAATGTTCATCCAAACCGCAGGGAAACC
TCAAAAGCACCTTCAACAACGGTTGTTAATTCAAGAAATCAAGAAGGGTCGAATTATAAT
CGAGGTAAAGGTAATATTAACCAGAAAAACCAACAAAAACAACCTAGGAATTCACAGCAG
AATGTTAAGCCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGAT
TTTGGGTATGATAAAGATTTTGAAAAGAGATATACAATTGGGAAATTGTTGGGTCATGGT
CAATTTGGTTATACATATGTTGCTACAGATAAATCTTCAGGAGATCGTGTGGCTGTCAAA
AGAATTGAGAAAAACAAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTC
AAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAG
GATGATAATTATGTCTACATCGTAATGGAGTTATGTGAAGGTGGAGAACTATTGGACCGA
ATTTTGTCCAAAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAG
ATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCT
GAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCCACAGATTTTGGT
CTTTCAGACTTCATCAGACCAGGGAAAAAGTTCCAAGACATTGTCGGTAGTGCATATTAT
GTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTGTGGAGTATTGGC
GTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGT
ATATTCAAGGAGGTCCTACGGAACAAACCTGATTTTCGTCGCAAGCCATGGTCTAACATA
AGCAACAGTGCTAAAGATTTTGTAAAGAAATTACTGGTGAAGGATCCTCGCGCTAGACTT
ACTGCTGCTCAGGCCCTATCACATCCTTGGGTCCGAGAGGGAGGGGATGCATCTGAGATT
CCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAGATACAGTCATCTAAAA
CAGTTTGCTTTACGGGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGA
GATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGA
CAGGCCCTTGCGAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTT
CAAGCGATTGACAGTAACACAGATGGGCTTGTTGATTTTCCGGAGTTTGTGGCTGCCACT
CTACATGTCCATCAGTTGGAGGAGCATAATTCTGCAAAGTGGCAGCAAAGATCACAAGCT
GCTTTTGAGAAATTTGATGTTGATAGAGATGGATTCATTACTCCAGAAGAACTTAAAATG
CACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGAC
GGAAAGATAAGCATATCAGAATTTCGTAGACTTTTAAGAACTGCTAGTATGAGTTCACCA
ACGGTGAGAGATTCACGGGGTATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400039123
PEP Infomation

pacid=37463999 transcript=PGSC0003DMT400058126 locus=PGSC0003DMG400022562 ID=PGSC0003DMT400058126.v4.03 annot-version=v4.03
Sequence

MGSCFSSSKVSGSNSNTPSTNNTATNTNTTVNVHPNRRETSKAPSTTVVNSRNQEGSNYN
RGKGNINQKNQQKQPRNSQQNVKPSSRRQGGVIPCGKRTDFGYDKDFEKRYTIGKLLGHG
QFGYTYVATDKSSGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALGGHENVVQFYNSFE
DDNYVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVVRQMLKVAAECHLHGLVHRDMKP
ENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIG
VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWSNISNSAKDFVKKLLVKDPRARL
TAAQALSHPWVREGGDASEIPLDISVLSNMRQFVRYSHLKQFALRALASTLDEEEIADLR
DQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFPEFVAAT
LHVHQLEEHNSAKWQQRSQAAFEKFDVDRDGFITPEELKMHTGLRGSIDPLLEEADIDKD
GKISISEFRRLLRTASMSSPTVRDSRGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400058126
Transcript Infomation

pacid=37463999 locus=PGSC0003DMG400022562 ID=PGSC0003DMT400058126.v4.03 annot-version=v4.03
Sequence

ATGGGTAGTTGTTTTTCAAGCTCCAAAGTTAGTGGCTCAAATAGCAATACCCCTTCAACC
AACAATACCGCCACAAACACAAACACAACGGTAAATGTTCATCCAAACCGCAGGGAAACC
TCAAAAGCACCTTCAACAACGGTTGTTAATTCAAGAAATCAAGAAGGGTCGAATTATAAT
CGAGGTAAAGGTAATATTAACCAGAAAAACCAACAAAAACAACCTAGGAATTCACAGCAG
AATGTTAAGCCAAGTTCAAGAAGACAAGGTGGGGTTATTCCTTGTGGGAAAAGAACAGAT
TTTGGGTATGATAAAGATTTTGAAAAGAGATATACAATTGGGAAATTGTTGGGTCATGGT
CAATTTGGTTATACATATGTTGCTACAGATAAATCTTCAGGAGATCGTGTGGCTGTCAAA
AGAATTGAGAAAAACAAGATGGTTCTTCCCATTGCGGTTGAGGATGTGAAACGAGAAGTC
AAGATATTGAAGGCCTTAGGTGGTCATGAGAATGTGGTTCAATTCTATAATTCATTCGAG
GATGATAATTATGTCTACATCGTAATGGAGTTATGTGAAGGTGGAGAACTATTGGACCGA
ATTTTGTCCAAAAAAGACAGTCGGTATACCGAGAAAGATGCAGCAATAGTTGTACGCCAG
ATGCTAAAAGTGGCAGCTGAGTGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCT
GAGAATTTTCTCTTTAAGTCTACAAAGGAGGATTCACCATTAAAAGCCACAGATTTTGGT
CTTTCAGACTTCATCAGACCAGGGAAAAAGTTCCAAGACATTGTCGGTAGTGCATATTAT
GTAGCTCCAGAGGTATTAAAGCGTAGATCAGGACCTGAATCAGATGTGTGGAGTATTGGC
GTAATTACATACATTTTGCTATGTGGTCGTCGGCCTTTCTGGGACAAAACTGAGGATGGT
ATATTCAAGGAGGTCCTACGGAACAAACCTGATTTTCGTCGCAAGCCATGGTCTAACATA
AGCAACAGTGCTAAAGATTTTGTAAAGAAATTACTGGTGAAGGATCCTCGCGCTAGACTT
ACTGCTGCTCAGGCCCTATCACATCCTTGGGTCCGAGAGGGAGGGGATGCATCTGAGATT
CCACTGGACATTTCTGTTTTATCCAACATGCGGCAATTTGTCAGATACAGTCATCTAAAA
CAGTTTGCTTTACGGGCGTTAGCTAGCACACTTGATGAGGAGGAGATCGCTGATCTGCGA
GATCAATTTTCTGCAATTGATGTGGATAAGAATGGTGTCATCAGTCTCGAAGAAATGAGA
CAGGCCCTTGCGAAGGATCTCCCATGGAAAATGAAAGAATCACGAGTTCTTGAGATTCTT
CAAGCGATTGACAGTAACACAGATGGGCTTGTTGATTTTCCGGAGTTTGTGGCTGCCACT
CTACATGTCCATCAGTTGGAGGAGCATAATTCTGCAAAGTGGCAGCAAAGATCACAAGCT
GCTTTTGAGAAATTTGATGTTGATAGAGATGGATTCATTACTCCAGAAGAACTTAAAATG
CACACGGGCTTGAGAGGCTCCATAGATCCACTTCTAGAGGAAGCAGATATTGACAAAGAC
GGAAAGATAAGCATATCAGAATTTCGTAGACTTTTAAGAACTGCTAGTATGAGTTCACCA
ACGGTGAGAGATTCACGGGGTATGTAG