Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058120
CDS Infomation

pacid=37461044 polypeptide=PGSC0003DMP400039119 locus=PGSC0003DMG400022560 ID=PGSC0003DMT400058120.v4.03 annot-version=v4.03
Sequence

ATGGCTGACATAGTGAAGCAGATCTTGGCTAAGCCAATTCAATTAGCAGACCAAGTAACA
AAAGTAGCAGACGAAGCAAATTCATTCAAACAAGATTGTGCAGATATCAAATCCAAAACA
GAGAAACTAGCCGCGCTGCTACGTCAAGCAGCGCGAGCTAGCAACGATCTCTACCAACGC
CCTACGAAACGAATCATCGAAGATACTGAACAAGTACTCGAAAAAGCCCTATCAATCGTC
TCGAAATGTCGAGCCAACGGGCTCGTTAAACGTGTTTTCACTATCATCCCTGCTGCTGCA
TTTAGGAAAATGACTTCTCTACTGGAAAATTCGATCGGTGATGTATCGTGGCTCCTCCGT
GTTTCTGCATCGGCGAATGAACGGGGTGATGAGTATTTGGGGCTGCCGCCGATTGCTGCT
AATGAACCTATATTGTGTTTGATTTGGGAACAGATTGCAATTTTGTATACTGGCTCATCG
GATGAGAGATCGGATGCTGCTGCTTCTTTGGTTTCGTTAGCTCAGGATAATGATCGGTAT
GGCAAGTTAATCATCGAAGAAGGTGGAGTTGGACCGTTGTTGAAATTGTTGAAGGAAGGG
AAATTGGAAGGTCAGGAGAATGCTGCTAAGGCAATTGGACTTCTTGGACGCGACCCTGAA
AGTGTCGAACACATGATACATGCTGGCGTTTGCTCAGTGTTTGCGAAAATCCTCAAAGAA
GGTCTGATGAAAGTTCAGTCAGTAGTGGCATGGGCAGTTGCAGAGCTCGTTTCACATTAC
CCGAAATGCCAAGATCTTTTTCAGCAGCATAATATAGTCAGGTTACTGGTTAGCCATCTC
GCGTTTGAGACGGTTCAAGAGCATATCAAGTATGCTATTGTCAGCAAAGCCACTTCGATT
CACGCTGTTGTTTTGGCTAGTAATAACAATAGTAATGTGAACAAGGCGAACGAGGATGAT
GGAAAGATTCGTGTTCCACATCCATTAGGGAATAATAAGTCTAATCAGATGCATAATGTG
ATTACCACCACTATGTCGATGAAGGGTCTAACGAAAACCCCTCAGGAAAATCTTGTCAAT
GGCGTGAACCAGACGTTGAATCAGCTTAGCAAGATTAACGGAAATAGCAACGTGATGAAG
CAAAATCATGTCAATCATCTGCAGCATCAGCATCAGCATCAGCATCAGAACAGTGTTTGT
TCAACTGGGGCGAGTAATAAAGGGAGGGAAAATGAGGATCCTGCTACCAAGGCTTATATG
AAGGCGATGGCTGCACGAGCATTATGGAAACTTGCCAAGGGAAATTCCTCAATTTGTCGC
AGCATTACTGAATCACGAGCACTGCTTTGCTTTGCGGTACTCCTGGACAAAGGAACAGAC
GATGTTAAGTACAATTCATCTATGTCCATAATGGAAATCACAGCAGTGGCAGAACAAGAT
GCTGATTTGAGACGGTCAGCGTTCAAGCCTAACACAACAGCCTGCAAAGCTGTTGTTGAT
CAATTACTGAGAATCATCGAAAAAGGAGATTCAGACTTGCTTATTCCATGTATCAATGCT
ATTGGAAACTTAGCTAGGACTTTTCGAGCAACTGAAACAAGGATCATTAGTCCATTAGTC
AAGCTACTTGATGAGCGCGAACCATTAATCTCCAAAGAAGCAGCATTAGCCCTTGCAAAA
TTCGCTTGTTCAGATAACTACCTTCACAAGGATCACTCCAAGGCCATCATAAACGCCGGA
GGGACAAAACATTTGATTCAACTTGTTTACTTTGGTGAACAAAAAGTTCAGAGTCCTGCA
TTGCTTCTACTTTGCTACATTGCGTTGCACGTTCCTGATAGTGAAGCACTTGCTCAAGCC
GAGGTACTGACAGTGCTCGAGTGGGCCTCAAAGCACGCGTACTTGAGCCAACACGAAAAG
GTAGAGAGATTGTTGCAGGAAGCAAATAGCAGGCTTGAACTATATCAATCTAGAGGATCA
AGGGGATTTCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400039119
PEP Infomation

pacid=37461044 transcript=PGSC0003DMT400058120 locus=PGSC0003DMG400022560 ID=PGSC0003DMT400058120.v4.03 annot-version=v4.03
Sequence

MADIVKQILAKPIQLADQVTKVADEANSFKQDCADIKSKTEKLAALLRQAARASNDLYQR
PTKRIIEDTEQVLEKALSIVSKCRANGLVKRVFTIIPAAAFRKMTSLLENSIGDVSWLLR
VSASANERGDEYLGLPPIAANEPILCLIWEQIAILYTGSSDERSDAAASLVSLAQDNDRY
GKLIIEEGGVGPLLKLLKEGKLEGQENAAKAIGLLGRDPESVEHMIHAGVCSVFAKILKE
GLMKVQSVVAWAVAELVSHYPKCQDLFQQHNIVRLLVSHLAFETVQEHIKYAIVSKATSI
HAVVLASNNNSNVNKANEDDGKIRVPHPLGNNKSNQMHNVITTTMSMKGLTKTPQENLVN
GVNQTLNQLSKINGNSNVMKQNHVNHLQHQHQHQHQNSVCSTGASNKGRENEDPATKAYM
KAMAARALWKLAKGNSSICRSITESRALLCFAVLLDKGTDDVKYNSSMSIMEITAVAEQD
ADLRRSAFKPNTTACKAVVDQLLRIIEKGDSDLLIPCINAIGNLARTFRATETRIISPLV
KLLDEREPLISKEAALALAKFACSDNYLHKDHSKAIINAGGTKHLIQLVYFGEQKVQSPA
LLLLCYIALHVPDSEALAQAEVLTVLEWASKHAYLSQHEKVERLLQEANSRLELYQSRGS
RGFH*

Transcript Sequence

Transcript ID

PGSC0003DMT400058120
Transcript Infomation

pacid=37461044 locus=PGSC0003DMG400022560 ID=PGSC0003DMT400058120.v4.03 annot-version=v4.03
Sequence

ATGGCTGACATAGTGAAGCAGATCTTGGCTAAGCCAATTCAATTAGCAGACCAAGTAACA
AAAGTAGCAGACGAAGCAAATTCATTCAAACAAGATTGTGCAGATATCAAATCCAAAACA
GAGAAACTAGCCGCGCTGCTACGTCAAGCAGCGCGAGCTAGCAACGATCTCTACCAACGC
CCTACGAAACGAATCATCGAAGATACTGAACAAGTACTCGAAAAAGCCCTATCAATCGTC
TCGAAATGTCGAGCCAACGGGCTCGTTAAACGTGTTTTCACTATCATCCCTGCTGCTGCA
TTTAGGAAAATGACTTCTCTACTGGAAAATTCGATCGGTGATGTATCGTGGCTCCTCCGT
GTTTCTGCATCGGCGAATGAACGGGGTGATGAGTATTTGGGGCTGCCGCCGATTGCTGCT
AATGAACCTATATTGTGTTTGATTTGGGAACAGATTGCAATTTTGTATACTGGCTCATCG
GATGAGAGATCGGATGCTGCTGCTTCTTTGGTTTCGTTAGCTCAGGATAATGATCGGTAT
GGCAAGTTAATCATCGAAGAAGGTGGAGTTGGACCGTTGTTGAAATTGTTGAAGGAAGGG
AAATTGGAAGGTCAGGAGAATGCTGCTAAGGCAATTGGACTTCTTGGACGCGACCCTGAA
AGTGTCGAACACATGATACATGCTGGCGTTTGCTCAGTGTTTGCGAAAATCCTCAAAGAA
GGTCTGATGAAAGTTCAGTCAGTAGTGGCATGGGCAGTTGCAGAGCTCGTTTCACATTAC
CCGAAATGCCAAGATCTTTTTCAGCAGCATAATATAGTCAGGTTACTGGTTAGCCATCTC
GCGTTTGAGACGGTTCAAGAGCATATCAAGTATGCTATTGTCAGCAAAGCCACTTCGATT
CACGCTGTTGTTTTGGCTAGTAATAACAATAGTAATGTGAACAAGGCGAACGAGGATGAT
GGAAAGATTCGTGTTCCACATCCATTAGGGAATAATAAGTCTAATCAGATGCATAATGTG
ATTACCACCACTATGTCGATGAAGGGTCTAACGAAAACCCCTCAGGAAAATCTTGTCAAT
GGCGTGAACCAGACGTTGAATCAGCTTAGCAAGATTAACGGAAATAGCAACGTGATGAAG
CAAAATCATGTCAATCATCTGCAGCATCAGCATCAGCATCAGCATCAGAACAGTGTTTGT
TCAACTGGGGCGAGTAATAAAGGGAGGGAAAATGAGGATCCTGCTACCAAGGCTTATATG
AAGGCGATGGCTGCACGAGCATTATGGAAACTTGCCAAGGGAAATTCCTCAATTTGTCGC
AGCATTACTGAATCACGAGCACTGCTTTGCTTTGCGGTACTCCTGGACAAAGGAACAGAC
GATGTTAAGTACAATTCATCTATGTCCATAATGGAAATCACAGCAGTGGCAGAACAAGAT
GCTGATTTGAGACGGTCAGCGTTCAAGCCTAACACAACAGCCTGCAAAGCTGTTGTTGAT
CAATTACTGAGAATCATCGAAAAAGGAGATTCAGACTTGCTTATTCCATGTATCAATGCT
ATTGGAAACTTAGCTAGGACTTTTCGAGCAACTGAAACAAGGATCATTAGTCCATTAGTC
AAGCTACTTGATGAGCGCGAACCATTAATCTCCAAAGAAGCAGCATTAGCCCTTGCAAAA
TTCGCTTGTTCAGATAACTACCTTCACAAGGATCACTCCAAGGCCATCATAAACGCCGGA
GGGACAAAACATTTGATTCAACTTGTTTACTTTGGTGAACAAAAAGTTCAGAGTCCTGCA
TTGCTTCTACTTTGCTACATTGCGTTGCACGTTCCTGATAGTGAAGCACTTGCTCAAGCC
GAGGTACTGACAGTGCTCGAGTGGGCCTCAAAGCACGCGTACTTGAGCCAACACGAAAAG
GTAGAGAGATTGTTGCAGGAAGCAAATAGCAGGCTTGAACTATATCAATCTAGAGGATCA
AGGGGATTTCATTGA