Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058061
CDS Infomation

pacid=37462797 polypeptide=PGSC0003DMP400039079 locus=PGSC0003DMG400022541 ID=PGSC0003DMT400058061.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAATATTGAGTTTATTCATCATGGTCACATCTATTCTTGCTTTTGCACCAATA
TTATGTTTATCTAGCAAGACCAATTATTATGGTTACCTATATCCACAATTTTATGATTGG
TCATGCCCAAATGCAAAAGAAATTGTCAAGTCTGTTGTTGCTAAAGCCGTAGCTAGAGAA
GCTCGAATGGCCGCCTCTTTGCTTAGGCTTCATTTTCACGATTGCTTTGTCAAGGGGTGT
GATGCATCATTGCTTCTAGACAGCAGTGGAACAATAATAAGTGAAAAATTATCAAACACC
AATAGAAATTCGGCACGTGGATTTGAAGTAATTGATGAAATTAAATCTGCACTTGAAATG
GAATGCCCTCAAACTGTCTCTTGTGCTGATATATTGGCACTTGCTGCAAGGGATTCTACT
GTTCTAGCTGGTGGACCAAGCTGGGAGGTTCCATTAGGAAGAAGAGACTCAAGAGATGCT
AGTATAAGTGGCTCCAACAATAACATTCCTGCTCCAAACAACACATTTAATACAATCCTC
ACTAAATTCAACTTAAAAGGGCTTGATCTTGTTGACCTTGTTGCTTTATCTGGGAGCCAC
ACCATTGGAAATGCAAGATGCACTAGCTTCAAGCAAAGACTCTACAATCAATCAGGAAAT
AATTTACCAGATTATACACTTGACCAATCATATGCTGCACAATTGAGCACTATGTGTCCA
AAATTTGGTGGTGACCAAAATTTATTTTTCTTGGATTATGTCACACCAACAAAATTTGAT
AACAATTACTACAAGAACTTGTTGGCTTCAAGGGGTTTATTGAATTCAGATCAAATTCTT
GTGACAAAGAATCAAGCAACATTAGAATTGGTGAAATTGTATGCTGAAAATAATGAGATT
TTTTTCGAGCATTTTGCGAAATCTATGGTTAAAATGGGAAATATTTCACCTTTAACTGGA
TATAAGGGAGAGATTAGGAAGAATTGTAGATACATGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039079
PEP Infomation

pacid=37462797 transcript=PGSC0003DMT400058061 locus=PGSC0003DMG400022541 ID=PGSC0003DMT400058061.v4.03 annot-version=v4.03
Sequence

MAKILSLFIMVTSILAFAPILCLSSKTNYYGYLYPQFYDWSCPNAKEIVKSVVAKAVARE
ARMAASLLRLHFHDCFVKGCDASLLLDSSGTIISEKLSNTNRNSARGFEVIDEIKSALEM
ECPQTVSCADILALAARDSTVLAGGPSWEVPLGRRDSRDASISGSNNNIPAPNNTFNTIL
TKFNLKGLDLVDLVALSGSHTIGNARCTSFKQRLYNQSGNNLPDYTLDQSYAAQLSTMCP
KFGGDQNLFFLDYVTPTKFDNNYYKNLLASRGLLNSDQILVTKNQATLELVKLYAENNEI
FFEHFAKSMVKMGNISPLTGYKGEIRKNCRYMN*

Transcript Sequence

Transcript ID

PGSC0003DMT400058061
Transcript Infomation

pacid=37462797 locus=PGSC0003DMG400022541 ID=PGSC0003DMT400058061.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAATATTGAGTTTATTCATCATGGTCACATCTATTCTTGCTTTTGCACCAATA
TTATGTTTATCTAGCAAGACCAATTATTATGGTTACCTATATCCACAATTTTATGATTGG
TCATGCCCAAATGCAAAAGAAATTGTCAAGTCTGTTGTTGCTAAAGCCGTAGCTAGAGAA
GCTCGAATGGCCGCCTCTTTGCTTAGGCTTCATTTTCACGATTGCTTTGTCAAGGGGTGT
GATGCATCATTGCTTCTAGACAGCAGTGGAACAATAATAAGTGAAAAATTATCAAACACC
AATAGAAATTCGGCACGTGGATTTGAAGTAATTGATGAAATTAAATCTGCACTTGAAATG
GAATGCCCTCAAACTGTCTCTTGTGCTGATATATTGGCACTTGCTGCAAGGGATTCTACT
GTTCTAGCTGGTGGACCAAGCTGGGAGGTTCCATTAGGAAGAAGAGACTCAAGAGATGCT
AGTATAAGTGGCTCCAACAATAACATTCCTGCTCCAAACAACACATTTAATACAATCCTC
ACTAAATTCAACTTAAAAGGGCTTGATCTTGTTGACCTTGTTGCTTTATCTGGGAGCCAC
ACCATTGGAAATGCAAGATGCACTAGCTTCAAGCAAAGACTCTACAATCAATCAGGAAAT
AATTTACCAGATTATACACTTGACCAATCATATGCTGCACAATTGAGCACTATGTGTCCA
AAATTTGGTGGTGACCAAAATTTATTTTTCTTGGATTATGTCACACCAACAAAATTTGAT
AACAATTACTACAAGAACTTGTTGGCTTCAAGGGGTTTATTGAATTCAGATCAAATTCTT
GTGACAAAGAATCAAGCAACATTAGAATTGGTGAAATTGTATGCTGAAAATAATGAGATT
TTTTTCGAGCATTTTGCGAAATCTATGGTTAAAATGGGAAATATTTCACCTTTAACTGGA
TATAAGGGAGAGATTAGGAAGAATTGTAGATACATGAACTAA