Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058059
CDS Infomation

pacid=37459852 polypeptide=PGSC0003DMP400039078 locus=PGSC0003DMG400022540 ID=PGSC0003DMT400058059.v4.03 annot-version=v4.03
Sequence

ATGGCCGAATTTTTTTCACTAGGAGGAGGAGGAGGAAGAGAAGCAACAAGTAGTCAAGAA
TATCATCATCATCATCAAGAAACTACTAATAGTACTCACAATTGGTTCTTGTACAAACAT
CATGATCAAGAATTACCAACATACAAAGGTTTCGAACTATGGCAACAACAACAACAACAA
CCTCATCACAACGATGAGGAGCAAAATTACCAAATTCTTCGAAACCCCATTATTAATCCA
TTTGGATTAGATATTGGGCCTAGTAATGATCATCATCATCATCATGAGACTAATATGATG
ATGAGAAGTAGTACTATTACAATAAGTTGTCAAGATTGTGGGAACCAAGCTAAGAAAGAT
TGTCAACATATGAGATGTAGGACTTGTTGTAAGAGTAGAGGTTTTCAATGTCAAACACAT
GTGAAAAGTACTTGGGTTCCAGCAGCTAAAAGAAGAGAAAGGCAACAACAACTTGCTTCT
TTGCAACCACAACAACAAGAAGAAGATAATAACAAGTCCAAAAGACAAAAAGATGATTCA
AATGCCGGGTTAGAAGTTGCAAATAATTTTCCATCAAAAGTAAATTCAACAGCTGTGTTT
CAACGTGTTAGAATGAGTTCAATTGAAGAAAATGAAGATCAAATAGCATATCAAGCTGCT
GTTAATATTAATGGACATATATTCAAAGGAATATTATATGATCAAGGTGATAATCATGAG
TACAATTATATGAATGGTGGTGATCATGACAGCTCATCGGGTGGCGATCTCGTGGCACGT
CAGCATAATCTTAATATTACTGGCACCGCCACATCAGCCGTGAATGACGCGACTGTAGGG
GGTGGCGGTGGTGCTTCCGCGGTGGCCGCAGAAGGATCATCACATTTTCTAGAAACTTCT
TTATACTCTAGTGTTAACACTTTCGTGGCTGGTACGCAATTTTTTCCACCTTCAAGATCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400039078
PEP Infomation

pacid=37459852 transcript=PGSC0003DMT400058059 locus=PGSC0003DMG400022540 ID=PGSC0003DMT400058059.v4.03 annot-version=v4.03
Sequence

MAEFFSLGGGGGREATSSQEYHHHHQETTNSTHNWFLYKHHDQELPTYKGFELWQQQQQQ
PHHNDEEQNYQILRNPIINPFGLDIGPSNDHHHHHETNMMMRSSTITISCQDCGNQAKKD
CQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLASLQPQQQEEDNNKSKRQKDDS
NAGLEVANNFPSKVNSTAVFQRVRMSSIEENEDQIAYQAAVNINGHIFKGILYDQGDNHE
YNYMNGGDHDSSSGGDLVARQHNLNITGTATSAVNDATVGGGGGASAVAAEGSSHFLETS
LYSSVNTFVAGTQFFPPSRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400058059
Transcript Infomation

pacid=37459852 locus=PGSC0003DMG400022540 ID=PGSC0003DMT400058059.v4.03 annot-version=v4.03
Sequence

ATGGCCGAATTTTTTTCACTAGGAGGAGGAGGAGGAAGAGAAGCAACAAGTAGTCAAGAA
TATCATCATCATCATCAAGAAACTACTAATAGTACTCACAATTGGTTCTTGTACAAACAT
CATGATCAAGAATTACCAACATACAAAGGTTTCGAACTATGGCAACAACAACAACAACAA
CCTCATCACAACGATGAGGAGCAAAATTACCAAATTCTTCGAAACCCCATTATTAATCCA
TTTGGATTAGATATTGGGCCTAGTAATGATCATCATCATCATCATGAGACTAATATGATG
ATGAGAAGTAGTACTATTACAATAAGTTGTCAAGATTGTGGGAACCAAGCTAAGAAAGAT
TGTCAACATATGAGATGTAGGACTTGTTGTAAGAGTAGAGGTTTTCAATGTCAAACACAT
GTGAAAAGTACTTGGGTTCCAGCAGCTAAAAGAAGAGAAAGGCAACAACAACTTGCTTCT
TTGCAACCACAACAACAAGAAGAAGATAATAACAAGTCCAAAAGACAAAAAGATGATTCA
AATGCCGGGTTAGAAGTTGCAAATAATTTTCCATCAAAAGTAAATTCAACAGCTGTGTTT
CAACGTGTTAGAATGAGTTCAATTGAAGAAAATGAAGATCAAATAGCATATCAAGCTGCT
GTTAATATTAATGGACATATATTCAAAGGAATATTATATGATCAAGGTGATAATCATGAG
TACAATTATATGAATGGTGGTGATCATGACAGCTCATCGGGTGGCGATCTCGTGGCACGT
CAGCATAATCTTAATATTACTGGCACCGCCACATCAGCCGTGAATGACGCGACTGTAGGG
GGTGGCGGTGGTGCTTCCGCGGTGGCCGCAGAAGGATCATCACATTTTCTAGAAACTTCT
TTATACTCTAGTGTTAACACTTTCGTGGCTGGTACGCAATTTTTTCCACCTTCAAGATCT
TGA