Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058053
CDS Infomation

pacid=37460386 polypeptide=PGSC0003DMP400039074 locus=PGSC0003DMG400022538 ID=PGSC0003DMT400058053.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCTTTGATGTTGCCGCCGACGCACCGGTATGCAGCCGGAGCTTTGTTTGGG
CTTGCTCTTCACCAGGCTCAGATCCATCAAACTTGTCCATTGGGCTTTCCGGATACACCG
CCGGAGGAACGGAGTAGCAGTGGCAGTAGTGCAGATTCCGTTTCCGATGATCCTCAACTT
TGGGTTCATGAATCCTCTGCTCTTCTAAGACCTATATTCAAATTTTTAGAGATTGATGAC
AAGGCATGGTCTGGACTAGAGGAAACTGCGGCCTCTACACCACCAAAGCATCATGTTGGA
GCGTTTCTAAGGTTACTGTCTGAAGAAAGTGATGATGGTTCTTCAGAAGCAGCAGACATG
GAACTTGCTTTGGCAAATGGCGTAGATGCTATGGCATCAAGCATGGAGAGAACTTCTGAT
AATGAGTCTAACGAGGAGAAGAGGCGTGAATATAAGCATGAATGTGAGGAGAAGCTATCA
ATTGCTGATGTGAAGTCCAAGTCTGATACGGAAAATACGAAGGTTGAAAATTACCCAGAG
AAAAGCCAAAAACCATCTAGCATTGTGGGGGCTCATTTGAAGTCTGTTAGTGGATCTGAT
GAAAAACCTGTGGAAGAGGTATCAATGCTTGGGTACACTAGGAAGGTGACCATTCTCTAT
GAGCTTCTTTCAGCTTGTCTCGCACAAGTACCTGAAGACGGTAAGAAAACTACTCGAAGA
AGGAAGGGTTATGATGCTCGACATCGTGTGGCTTTACGGTTGCTAGCGACATGGCTTAAT
GTCAGATGGATCAAAGTGGAAGCCATTGAGACCATGGTTGCTTGTTCAGCAATGGCTTTG
CTGAAAGAGGAAGAATCAAAGGAGGAAAGCCAATCTCCTGATAGTTCATGGGTTAAGTGG
AAACGAGGAGGTATTATAGGTGCAGCTGCATTGACTGGTGGAACTTTAATGGCAATTACT
GGTGGTTTGGCTGCTCCAGCAATAGCTGCAGGCTTTGGTGCTTTAGCACCTACCTTGGGC
ACTCTTATTCCTGTGATTGGAGCAAGTGGGTTCGCTGCTGTTGCTACTGCTGCTGGGAGT
GTTGCAGGATCTGTTGCAGTCGCAGCATCATTTGGAGCTGCTGGAGCCGGACTTACTGGA
ACTAAAATGGCCAGGAGAACTGGAGATGTTGATGAATTTGAGTTCAAGGCTATAGGGGAA
AACCACAACCAGGGGCGGCTGGCAGTTCAGATCTTGATCTCGGGACTTATTTTTGAGGAG
GAAGACTTTATAAGACCTTGGGAAGGACAACATGATAACTCTGAAAGGTATATATTGCAG
TGGGAATCTAAGAATCTTATTGCTGTGAGCACTGCAATTCAGGATTGGCTGACTTCACGA
ATTGCAATGGAGTTGATGAAGCAAGGTGCTATGATGACTGTACTACACACTCTTTTAATA
GCTTTGGCTTGGCCAGCAGCTTTACTTACTATTACTGATTTCATAGACAGCACATGGTCA
ATTGCTGTGGACAGATCTGATAAAGCAGGAGTGCTCCTAGCAGAAGTGTTGAAGAAAGGA
TTACAGGGACACAGGCCTGTGACACTTGTAGGATTTTCACTAGGGGCAAGAGTTATTTTT
AAATGTCTACAGGTTTTGGCTGAGAGTGAAAATAATTCTGGACTTGTGGAAAGGGTCGTT
CTTCTTGGGGCACCTATTGCAATTAAAGATATGGACTGGGAAGCAGCTAGAAAGGTGGTA
GCTGGTAGATTTGTGAATGCTTATTCTACCAATGATTGGATGCTTGGAGTTGCCTTTCGT
GCCAGTCTCCTTACTCAAGGCCTGGCTGGAATTCAACCAGTTGAGATTCCTGGTGTTGAG
AATGTTGATGTAACTGAATTCATCAAGGGCCATTCGTCATATCTATGGGCTACACAAGAG
ATTTTAGAACTACTTGAGCTGGATACTTATTATCCTGTTTTCGGTCATCGCGTTGTAAAA
ACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039074
PEP Infomation

pacid=37460386 transcript=PGSC0003DMT400058053 locus=PGSC0003DMG400022538 ID=PGSC0003DMT400058053.v4.03 annot-version=v4.03
Sequence

MSSSLMLPPTHRYAAGALFGLALHQAQIHQTCPLGFPDTPPEERSSSGSSADSVSDDPQL
WVHESSALLRPIFKFLEIDDKAWSGLEETAASTPPKHHVGAFLRLLSEESDDGSSEAADM
ELALANGVDAMASSMERTSDNESNEEKRREYKHECEEKLSIADVKSKSDTENTKVENYPE
KSQKPSSIVGAHLKSVSGSDEKPVEEVSMLGYTRKVTILYELLSACLAQVPEDGKKTTRR
RKGYDARHRVALRLLATWLNVRWIKVEAIETMVACSAMALLKEEESKEESQSPDSSWVKW
KRGGIIGAAALTGGTLMAITGGLAAPAIAAGFGALAPTLGTLIPVIGASGFAAVATAAGS
VAGSVAVAASFGAAGAGLTGTKMARRTGDVDEFEFKAIGENHNQGRLAVQILISGLIFEE
EDFIRPWEGQHDNSERYILQWESKNLIAVSTAIQDWLTSRIAMELMKQGAMMTVLHTLLI
ALAWPAALLTITDFIDSTWSIAVDRSDKAGVLLAEVLKKGLQGHRPVTLVGFSLGARVIF
KCLQVLAESENNSGLVERVVLLGAPIAIKDMDWEAARKVVAGRFVNAYSTNDWMLGVAFR
ASLLTQGLAGIQPVEIPGVENVDVTEFIKGHSSYLWATQEILELLELDTYYPVFGHRVVK
T*

Transcript Sequence

Transcript ID

PGSC0003DMT400058053
Transcript Infomation

pacid=37460386 locus=PGSC0003DMG400022538 ID=PGSC0003DMT400058053.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCTTTGATGTTGCCGCCGACGCACCGGTATGCAGCCGGAGCTTTGTTTGGG
CTTGCTCTTCACCAGGCTCAGATCCATCAAACTTGTCCATTGGGCTTTCCGGATACACCG
CCGGAGGAACGGAGTAGCAGTGGCAGTAGTGCAGATTCCGTTTCCGATGATCCTCAACTT
TGGGTTCATGAATCCTCTGCTCTTCTAAGACCTATATTCAAATTTTTAGAGATTGATGAC
AAGGCATGGTCTGGACTAGAGGAAACTGCGGCCTCTACACCACCAAAGCATCATGTTGGA
GCGTTTCTAAGGTTACTGTCTGAAGAAAGTGATGATGGTTCTTCAGAAGCAGCAGACATG
GAACTTGCTTTGGCAAATGGCGTAGATGCTATGGCATCAAGCATGGAGAGAACTTCTGAT
AATGAGTCTAACGAGGAGAAGAGGCGTGAATATAAGCATGAATGTGAGGAGAAGCTATCA
ATTGCTGATGTGAAGTCCAAGTCTGATACGGAAAATACGAAGGTTGAAAATTACCCAGAG
AAAAGCCAAAAACCATCTAGCATTGTGGGGGCTCATTTGAAGTCTGTTAGTGGATCTGAT
GAAAAACCTGTGGAAGAGGTATCAATGCTTGGGTACACTAGGAAGGTGACCATTCTCTAT
GAGCTTCTTTCAGCTTGTCTCGCACAAGTACCTGAAGACGGTAAGAAAACTACTCGAAGA
AGGAAGGGTTATGATGCTCGACATCGTGTGGCTTTACGGTTGCTAGCGACATGGCTTAAT
GTCAGATGGATCAAAGTGGAAGCCATTGAGACCATGGTTGCTTGTTCAGCAATGGCTTTG
CTGAAAGAGGAAGAATCAAAGGAGGAAAGCCAATCTCCTGATAGTTCATGGGTTAAGTGG
AAACGAGGAGGTATTATAGGTGCAGCTGCATTGACTGGTGGAACTTTAATGGCAATTACT
GGTGGTTTGGCTGCTCCAGCAATAGCTGCAGGCTTTGGTGCTTTAGCACCTACCTTGGGC
ACTCTTATTCCTGTGATTGGAGCAAGTGGGTTCGCTGCTGTTGCTACTGCTGCTGGGAGT
GTTGCAGGATCTGTTGCAGTCGCAGCATCATTTGGAGCTGCTGGAGCCGGACTTACTGGA
ACTAAAATGGCCAGGAGAACTGGAGATGTTGATGAATTTGAGTTCAAGGCTATAGGGGAA
AACCACAACCAGGGGCGGCTGGCAGTTCAGATCTTGATCTCGGGACTTATTTTTGAGGAG
GAAGACTTTATAAGACCTTGGGAAGGACAACATGATAACTCTGAAAGGTATATATTGCAG
TGGGAATCTAAGAATCTTATTGCTGTGAGCACTGCAATTCAGGATTGGCTGACTTCACGA
ATTGCAATGGAGTTGATGAAGCAAGGTGCTATGATGACTGTACTACACACTCTTTTAATA
GCTTTGGCTTGGCCAGCAGCTTTACTTACTATTACTGATTTCATAGACAGCACATGGTCA
ATTGCTGTGGACAGATCTGATAAAGCAGGAGTGCTCCTAGCAGAAGTGTTGAAGAAAGGA
TTACAGGGACACAGGCCTGTGACACTTGTAGGATTTTCACTAGGGGCAAGAGTTATTTTT
AAATGTCTACAGGTTTTGGCTGAGAGTGAAAATAATTCTGGACTTGTGGAAAGGGTCGTT
CTTCTTGGGGCACCTATTGCAATTAAAGATATGGACTGGGAAGCAGCTAGAAAGGTGGTA
GCTGGTAGATTTGTGAATGCTTATTCTACCAATGATTGGATGCTTGGAGTTGCCTTTCGT
GCCAGTCTCCTTACTCAAGGCCTGGCTGGAATTCAACCAGTTGAGATTCCTGGTGTTGAG
AATGTTGATGTAACTGAATTCATCAAGGGCCATTCGTCATATCTATGGGCTACACAAGAG
ATTTTAGAACTACTTGAGCTGGATACTTATTATCCTGTTTTCGGTCATCGCGTTGTAAAA
ACATAA