Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400058050
CDS Infomation

pacid=37458910 polypeptide=PGSC0003DMP400039072 locus=PGSC0003DMG400022537 ID=PGSC0003DMT400058050.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGCGCAAAATGAATGAGAAAACAGAGGCTCATGCAACTAATATCTCGGAGAAA
CTAGGAAATCGAGCCATCATTGATCAGGCTGTGGATGGGTCTGGATCTGAGACTTCAATT
GCAAGTCTCTCAACAATGAACTCAGCATCCACCAACATCAGTGAAACAGATGAAGTGTGG
CATTACCGTGACCCTAATGGTAAAGTGCAAGGATCATTTTCGATGACACAATTGAGGAAA
TGGAGTACATTGGGGATTTTCCCACTTGATATGAGGATATGGACAAATGATGAGTATGAT
GATGCAGTACTTTTAAATGATGCACTAAATGGGCTGTTCCGTAAAGCCCCTGCTGTTCAT
GGGAAGACCTCAAGCCAGTCTCATGAGCTTGGACCTGCCTCTGATGACAGAAATGGTACT
GGGTGTGGAAGCTCTGCTGGAACAGGGAGAGAATGCAGAGAAATGGAGGTACCTCGCCAT
CGTGCAAGTAAAGATTCAAATGGAAATGCTGAGAATATGAGGATGGATGGGATGTCGGCT
TCTTTTCCAAAATTTTTGGACTTGATGAATGGAAATAATTCTTATTCAGACAAACTCCAA
CTGTGTAGCCCAGTCCCTTCATCTCATCATGGCGAGGTGCATGTAGCTCTTCCAAGTAAG
GAAAGAGTTCATGAAAATGTGGAGCTTTGCATTGCCACAGGTCAAGTAATTAAGGATTCC
TGTGGAAGCACAATATGCCAGAATACTGATACTTACAGTCGTAATACCCAATCTAACAGC
CAGAGTAATGTAGGGCAGTCTTCTGGACAGAATTGGGGGTCCTCAACCAGTAGCAGACTT
TCATTTAACTTGGACAGTGGTTTTGCTTCAGGTACCAATTCAAAAGATTCATTTGAGCAG
AAAGGTAACGTGAATCTTCCAGATCGGCCAAGTCCTGCCGCAAAAACCACCTATGACGAT
ATTGAAGCTCAGGCTGCTGAAAAGCTGCTTTTTTTGAGTTCAGGTGTTCCTCTTCGTGCT
TCAGATATCCATGATTGGTCTAGTTCTACTCCAAAGTCCTATGGTGAAGCTAAAGCTGGA
CAGGCAACTGGAAACAAAGAATCTGCTCCTTCTAAGCTTTCTGTGCAGGATTCAGGCCCT
AGCTGGAGCAGTGGTTCTAGTCTAGCTGATGAACAGGACGGGAACTCACCAACTGCAGAA
CCATCTGCTGAAGAACGGGATGCTGGTCTTGTCTCCATTTCTTCTCTGAAGCCAGCTGAA
GCAGTGAGTGATCATGTTGCCACACCCATTCCTATAGCAGATCAACTTAATCTTAATCTT
ACTTCCACATCGCTCCAGATGTCAAACTTATCCAGTTGGCAGGCAACTGTTAATGAGCCT
ATTGAGTTCAGCACTTTGGCTGAAGAGTCGGTGTCAGATCTATTGGCTGAAGTTGATGCA
ATGGAATCTCAAACTCAAAGTGGTATGGGTTCACCTACTTCAGCAATGAGGTTTAGTGAG
CAGATGATACCAGGTTACAAAAACTTTATTTTAGCTTTGTTTGAGGACCTGAGTCCTACG
CATGATCCTGCAAAAAGTGATGGCTTGAGCTCAAATGGAGATATAAAGTTGCCTTGTCAA
TCACCTGTGACAGATGAGTTAGTTGGGCCATCTCAAGCTGATGTATTTGACCCTTTGAAG
AGGTCTGATGGGAATTCATCTAATGAGCAGCGAGGGAGAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400039072
PEP Infomation

pacid=37458910 transcript=PGSC0003DMT400058050 locus=PGSC0003DMG400022537 ID=PGSC0003DMT400058050.v4.03 annot-version=v4.03
Sequence

MAQRKMNEKTEAHATNISEKLGNRAIIDQAVDGSGSETSIASLSTMNSASTNISETDEVW
HYRDPNGKVQGSFSMTQLRKWSTLGIFPLDMRIWTNDEYDDAVLLNDALNGLFRKAPAVH
GKTSSQSHELGPASDDRNGTGCGSSAGTGRECREMEVPRHRASKDSNGNAENMRMDGMSA
SFPKFLDLMNGNNSYSDKLQLCSPVPSSHHGEVHVALPSKERVHENVELCIATGQVIKDS
CGSTICQNTDTYSRNTQSNSQSNVGQSSGQNWGSSTSSRLSFNLDSGFASGTNSKDSFEQ
KGNVNLPDRPSPAAKTTYDDIEAQAAEKLLFLSSGVPLRASDIHDWSSSTPKSYGEAKAG
QATGNKESAPSKLSVQDSGPSWSSGSSLADEQDGNSPTAEPSAEERDAGLVSISSLKPAE
AVSDHVATPIPIADQLNLNLTSTSLQMSNLSSWQATVNEPIEFSTLAEESVSDLLAEVDA
MESQTQSGMGSPTSAMRFSEQMIPGYKNFILALFEDLSPTHDPAKSDGLSSNGDIKLPCQ
SPVTDELVGPSQADVFDPLKRSDGNSSNEQRGRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400058050
Transcript Infomation

pacid=37458910 locus=PGSC0003DMG400022537 ID=PGSC0003DMT400058050.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGCGCAAAATGAATGAGAAAACAGAGGCTCATGCAACTAATATCTCGGAGAAA
CTAGGAAATCGAGCCATCATTGATCAGGCTGTGGATGGGTCTGGATCTGAGACTTCAATT
GCAAGTCTCTCAACAATGAACTCAGCATCCACCAACATCAGTGAAACAGATGAAGTGTGG
CATTACCGTGACCCTAATGGTAAAGTGCAAGGATCATTTTCGATGACACAATTGAGGAAA
TGGAGTACATTGGGGATTTTCCCACTTGATATGAGGATATGGACAAATGATGAGTATGAT
GATGCAGTACTTTTAAATGATGCACTAAATGGGCTGTTCCGTAAAGCCCCTGCTGTTCAT
GGGAAGACCTCAAGCCAGTCTCATGAGCTTGGACCTGCCTCTGATGACAGAAATGGTACT
GGGTGTGGAAGCTCTGCTGGAACAGGGAGAGAATGCAGAGAAATGGAGGTACCTCGCCAT
CGTGCAAGTAAAGATTCAAATGGAAATGCTGAGAATATGAGGATGGATGGGATGTCGGCT
TCTTTTCCAAAATTTTTGGACTTGATGAATGGAAATAATTCTTATTCAGACAAACTCCAA
CTGTGTAGCCCAGTCCCTTCATCTCATCATGGCGAGGTGCATGTAGCTCTTCCAAGTAAG
GAAAGAGTTCATGAAAATGTGGAGCTTTGCATTGCCACAGGTCAAGTAATTAAGGATTCC
TGTGGAAGCACAATATGCCAGAATACTGATACTTACAGTCGTAATACCCAATCTAACAGC
CAGAGTAATGTAGGGCAGTCTTCTGGACAGAATTGGGGGTCCTCAACCAGTAGCAGACTT
TCATTTAACTTGGACAGTGGTTTTGCTTCAGGTACCAATTCAAAAGATTCATTTGAGCAG
AAAGGTAACGTGAATCTTCCAGATCGGCCAAGTCCTGCCGCAAAAACCACCTATGACGAT
ATTGAAGCTCAGGCTGCTGAAAAGCTGCTTTTTTTGAGTTCAGGTGTTCCTCTTCGTGCT
TCAGATATCCATGATTGGTCTAGTTCTACTCCAAAGTCCTATGGTGAAGCTAAAGCTGGA
CAGGCAACTGGAAACAAAGAATCTGCTCCTTCTAAGCTTTCTGTGCAGGATTCAGGCCCT
AGCTGGAGCAGTGGTTCTAGTCTAGCTGATGAACAGGACGGGAACTCACCAACTGCAGAA
CCATCTGCTGAAGAACGGGATGCTGGTCTTGTCTCCATTTCTTCTCTGAAGCCAGCTGAA
GCAGTGAGTGATCATGTTGCCACACCCATTCCTATAGCAGATCAACTTAATCTTAATCTT
ACTTCCACATCGCTCCAGATGTCAAACTTATCCAGTTGGCAGGCAACTGTTAATGAGCCT
ATTGAGTTCAGCACTTTGGCTGAAGAGTCGGTGTCAGATCTATTGGCTGAAGTTGATGCA
ATGGAATCTCAAACTCAAAGTGGTATGGGTTCACCTACTTCAGCAATGAGGTTTAGTGAG
CAGATGATACCAGGTTACAAAAACTTTATTTTAGCTTTGTTTGAGGACCTGAGTCCTACG
CATGATCCTGCAAAAAGTGATGGCTTGAGCTCAAATGGAGATATAAAGTTGCCTTGTCAA
TCACCTGTGACAGATGAGTTAGTTGGGCCATCTCAAGCTGATGTATTTGACCCTTTGAAG
AGGTCTGATGGGAATTCATCTAATGAGCAGCGAGGGAGAAACTAA