Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057981
CDS Infomation

pacid=37437952 polypeptide=PGSC0003DMP400039027 locus=PGSC0003DMG400022507 ID=PGSC0003DMT400057981.v4.03 annot-version=v4.03
Sequence

ATGGCTCCGGAAGTTTACGAGGAGGAATACAATGAACTAGTTGACATATATTCTTTTGGT
ATGTGCATATTAGAAATGGTTACTTTTGAGTACCCATATAGTGAGTGCACCCATCCAGCT
CAGATCTACAAGAAAGTGATGTCTGGGAAAAAGCCAGACGCGTTGTACCAAGTGAAGGAT
CCTGAGATACGTCAATTCGTTGAAAAATGTTTGGCCACTGTGTCTCTAAGGCTCTCAGCA
AGAGAGCTTCTGGATGACCCTTTTCTCCAGATTGATGATAGTGAATCAGATTTAAGACAT
ACAGAGTCTAGGAGAGAACTAGATTATATGAACCCTCTGCTAAGGAAGCCTGTTCTTGGA
CTAGATTATGAAGGAAAATCGTTTGGTAATGGCGCCTACAATGATTATGGTTTTGATGAT
ATACATGAATGGGCATCTGATCCAAATGAATATGAGCAAACTGGAATTGAACTGTTTGAG
TATAACGATGATGAACACGATGAACATTCCGCAGATTTGGATATAACTATTAAAGGGAAG
AGAAGAGAAGATGGTAGCATCTTCTTAAGACTCAGAATTGCAGACAAAGAAGGCCGTATC
AGGAATATCTATTTCCCATTTGATGTTGAATATGATACAGCATTAACTGTTGCAACTGAA
ATGGTATCCGAATTGGATATCACTGATCAAGATGTTACAAAAATCGCCGATATGATTGAT
GGTGAGATTTCCAAGTTAGAACCCGATTGGAAGCCAGGGCCAGGAATCGTAGAAACCCCT
CGCTTTGCAAATTCTAGCTTCTGTCACAACTGTTCGTCCAACAATTCCTCTATCGGTTCG
TTCATGAATTTCCTGTCTAAAAATCCAGCTACTCAGAATTTGCAGTTAGCGGAATGCAAT
GGATGTGCTGCTACACATGGTCGGTTTGAAGAGGTTACATATCAATCTAACAGTCCTCGG
CCTATTACTTCGACTTGTTCTGATGAACCAGCATCATCAAGCCATATTAATGGTGTCCAT
TACAACTTGTTCAAAATGAATGGTTTCCATCACACAGAGATTTGGGATCGGCATGAAAGC
TTTGAATGCAGTTCAGTGGGATCCGAGGAGAGTCATTTCCTTGAAGAAGGTGAGAAATTG
TATCACGACCCGTCAACAGAAGGTCAGAAAGAGGCTGGACCAAAGAGTGAGCTTACATCA
GGTGTAAAAAATTTAGGCAGATCTTTATCAAATCCCCGTTCTTTAGGTGAAATTCCTGCG
CCATACGAAATTTCTGAGTATGAGCACTTGATTGAGCAGGAAATGAGATGGCTCAAAGCA
AACTACCAGATAAAATTGAGGGAGCTAAAAGATCAACACTTGGGACTTCCACCTAAAGCT
TCAAAACCTCCTACAGGTTCCTCTAAGCGGAAAAAGAAGACAAAGAATAGGAATTCATGT
CTTGAAACTCTACTTAAGTCTTCTGATTGTGGTAAGACCATTAGTTCAGAATCAAATGGA
CTTAGCTGCCCCATTTCGGTATCCCAAAGGGCCCGAAAATGTGAGGCGATGAAAGGTTCC
CCGAATGTCAGGGACATGGTTAGTACTGCAAAGAGTTTCTTCACCAGAACATTGCTTCCC
AACTCACTTCACAGAACAACATCCTTACCAGTTGATGCTGTTGATATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400039027
PEP Infomation

pacid=37437952 transcript=PGSC0003DMT400057981 locus=PGSC0003DMG400022507 ID=PGSC0003DMT400057981.v4.03 annot-version=v4.03
Sequence

MAPEVYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVMSGKKPDALYQVKD
PEIRQFVEKCLATVSLRLSARELLDDPFLQIDDSESDLRHTESRRELDYMNPLLRKPVLG
LDYEGKSFGNGAYNDYGFDDIHEWASDPNEYEQTGIELFEYNDDEHDEHSADLDITIKGK
RREDGSIFLRLRIADKEGRIRNIYFPFDVEYDTALTVATEMVSELDITDQDVTKIADMID
GEISKLEPDWKPGPGIVETPRFANSSFCHNCSSNNSSIGSFMNFLSKNPATQNLQLAECN
GCAATHGRFEEVTYQSNSPRPITSTCSDEPASSSHINGVHYNLFKMNGFHHTEIWDRHES
FECSSVGSEESHFLEEGEKLYHDPSTEGQKEAGPKSELTSGVKNLGRSLSNPRSLGEIPA
PYEISEYEHLIEQEMRWLKANYQIKLRELKDQHLGLPPKASKPPTGSSKRKKKTKNRNSC
LETLLKSSDCGKTISSESNGLSCPISVSQRARKCEAMKGSPNVRDMVSTAKSFFTRTLLP
NSLHRTTSLPVDAVDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057981
Transcript Infomation

pacid=37437952 locus=PGSC0003DMG400022507 ID=PGSC0003DMT400057981.v4.03 annot-version=v4.03
Sequence

ATGGCTCCGGAAGTTTACGAGGAGGAATACAATGAACTAGTTGACATATATTCTTTTGGT
ATGTGCATATTAGAAATGGTTACTTTTGAGTACCCATATAGTGAGTGCACCCATCCAGCT
CAGATCTACAAGAAAGTGATGTCTGGGAAAAAGCCAGACGCGTTGTACCAAGTGAAGGAT
CCTGAGATACGTCAATTCGTTGAAAAATGTTTGGCCACTGTGTCTCTAAGGCTCTCAGCA
AGAGAGCTTCTGGATGACCCTTTTCTCCAGATTGATGATAGTGAATCAGATTTAAGACAT
ACAGAGTCTAGGAGAGAACTAGATTATATGAACCCTCTGCTAAGGAAGCCTGTTCTTGGA
CTAGATTATGAAGGAAAATCGTTTGGTAATGGCGCCTACAATGATTATGGTTTTGATGAT
ATACATGAATGGGCATCTGATCCAAATGAATATGAGCAAACTGGAATTGAACTGTTTGAG
TATAACGATGATGAACACGATGAACATTCCGCAGATTTGGATATAACTATTAAAGGGAAG
AGAAGAGAAGATGGTAGCATCTTCTTAAGACTCAGAATTGCAGACAAAGAAGGCCGTATC
AGGAATATCTATTTCCCATTTGATGTTGAATATGATACAGCATTAACTGTTGCAACTGAA
ATGGTATCCGAATTGGATATCACTGATCAAGATGTTACAAAAATCGCCGATATGATTGAT
GGTGAGATTTCCAAGTTAGAACCCGATTGGAAGCCAGGGCCAGGAATCGTAGAAACCCCT
CGCTTTGCAAATTCTAGCTTCTGTCACAACTGTTCGTCCAACAATTCCTCTATCGGTTCG
TTCATGAATTTCCTGTCTAAAAATCCAGCTACTCAGAATTTGCAGTTAGCGGAATGCAAT
GGATGTGCTGCTACACATGGTCGGTTTGAAGAGGTTACATATCAATCTAACAGTCCTCGG
CCTATTACTTCGACTTGTTCTGATGAACCAGCATCATCAAGCCATATTAATGGTGTCCAT
TACAACTTGTTCAAAATGAATGGTTTCCATCACACAGAGATTTGGGATCGGCATGAAAGC
TTTGAATGCAGTTCAGTGGGATCCGAGGAGAGTCATTTCCTTGAAGAAGGTGAGAAATTG
TATCACGACCCGTCAACAGAAGGTCAGAAAGAGGCTGGACCAAAGAGTGAGCTTACATCA
GGTGTAAAAAATTTAGGCAGATCTTTATCAAATCCCCGTTCTTTAGGTGAAATTCCTGCG
CCATACGAAATTTCTGAGTATGAGCACTTGATTGAGCAGGAAATGAGATGGCTCAAAGCA
AACTACCAGATAAAATTGAGGGAGCTAAAAGATCAACACTTGGGACTTCCACCTAAAGCT
TCAAAACCTCCTACAGGTTCCTCTAAGCGGAAAAAGAAGACAAAGAATAGGAATTCATGT
CTTGAAACTCTACTTAAGTCTTCTGATTGTGGTAAGACCATTAGTTCAGAATCAAATGGA
CTTAGCTGCCCCATTTCGGTATCCCAAAGGGCCCGAAAATGTGAGGCGATGAAAGGTTCC
CCGAATGTCAGGGACATGGTTAGTACTGCAAAGAGTTTCTTCACCAGAACATTGCTTCCC
AACTCACTTCACAGAACAACATCCTTACCAGTTGATGCTGTTGATATATAA