Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057933
CDS Infomation

pacid=37435097 polypeptide=PGSC0003DMP400039007 locus=PGSC0003DMG400022499 ID=PGSC0003DMT400057933.v4.03 annot-version=v4.03
Sequence

ATGAGACGAAGCTTAAGCAAGCTTTCTCACTGCTCTATTGGCCGACCCACCACCGCCTCA
CCGGCTTACGCCTTTTCCACTTTCTCCGGCGGCGGCGGTGGTGGTAGAGGCAGGGGACGA
GGTTCCGATTTCCCAAACTTCGGATTCAGTCCGGGCAAATCCGCATCCGAAGACTCCAAA
CCGGAATCATCGACTCCTACTACTCCTTCTGGAACTGGACATGGACGAGGTCGAGGTAAA
CCATTACCTTCGTCCCCAATTGTTCCCTCATTTTACTCCGTTGTCGATAACCCTAATCCT
CCTGCTGGCCGTGGCCGAGGTGGGATCGGTCCATTTTCTCCACCACCTCAGCCGCAACAG
CAACAACAACAACAGCAGCAGCCACTGAGGAAACCGATTTTCTTCGCGAAGGAAGAAGAA
ACAGCTGATTCAAATTCTAGTTCTTCTGATGCTCCGACACCGAGAGATGATTCAAATCTC
TCTTCTAGTGTAATATCAGTTTTGACTGGTGCGGGGCGAGGGAAGCCCTTGCAAACGGCT
TCTCCTGTCTCTGAGAAGCCTAAGGAAGAGAATCGCCATCTCCGGCCTCGGCAGCAGAAA
GTTGCAGATTCAGGGGAGAGAGCGAGCAGTCCACCTCCCCAGAGGTTGAGTAGGGAGGAT
GCAGTAAAAAAGGCTGTAGGGATATTGTCAAGAAGTGATGATGGTGATGGTGATGGTGAT
GTTGGTGGTGGAAGGGGAATGGGAGGAGGATTTAGAGGGAGGGGTGGTCGTGGTGCGGTG
AGAGGCAGAGGGGGAAGGGGAAGGGGAAGAGGAAGAGGAAGAGGTCGTCGGGATGAGGAG
AGAGGAGATGGTAGTTTGGAGAGTGGCTTTTATCTAGGTGATGATGCTGATGGGGAGAAG
TTGGCTCAGAAGCTTGGACCTGAAGGTATGAATACATTGGCTGAAGGCTTTGAAGAAATG
AGTGCCAGAGTGTTGCCTTCTCCCATGGATGATGCCTACATAGAGGCCCTTCACACTAAC
ATGATGATAGAGTGTGAACCAGAGTACCTGATGGGAGACTTTGAAAGCAATCCTGATATT
GATGAGACACCTCCAATTCCTCTTCGTGATGCTCTTGAAAAAATGAAGCCATTCCTCATG
GCATATGAAGGGATTAAGGATCAAGAAGAGTGGGAGGAAGTCATCAAAGAAACTATGGAG
ACTGTCCCACTTATGAAAGAGATAGTTGATTACTACAGTGGGCCCGATAGAGTAACGGCA
AAGCAACAGCAACAAGAGCTGGAAAGAGTAGCAAAAACTCTTCCAGAAAGTGCACCCAAT
TCAGTAAAGCGGTTCACAGAGCGTGCTGTTCTATCTCTACAGAGCAACCCAGGGTGGGGA
TTTGACAAGAAATGTCAGTTCATGGACAAGGTGGTAATGGAAGCCTCTCAGCATTACAAA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400039007
PEP Infomation

pacid=37435097 transcript=PGSC0003DMT400057933 locus=PGSC0003DMG400022499 ID=PGSC0003DMT400057933.v4.03 annot-version=v4.03
Sequence

MRRSLSKLSHCSIGRPTTASPAYAFSTFSGGGGGGRGRGRGSDFPNFGFSPGKSASEDSK
PESSTPTTPSGTGHGRGRGKPLPSSPIVPSFYSVVDNPNPPAGRGRGGIGPFSPPPQPQQ
QQQQQQQPLRKPIFFAKEEETADSNSSSSDAPTPRDDSNLSSSVISVLTGAGRGKPLQTA
SPVSEKPKEENRHLRPRQQKVADSGERASSPPPQRLSREDAVKKAVGILSRSDDGDGDGD
VGGGRGMGGGFRGRGGRGAVRGRGGRGRGRGRGRGRRDEERGDGSLESGFYLGDDADGEK
LAQKLGPEGMNTLAEGFEEMSARVLPSPMDDAYIEALHTNMMIECEPEYLMGDFESNPDI
DETPPIPLRDALEKMKPFLMAYEGIKDQEEWEEVIKETMETVPLMKEIVDYYSGPDRVTA
KQQQQELERVAKTLPESAPNSVKRFTERAVLSLQSNPGWGFDKKCQFMDKVVMEASQHYK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400057933
Transcript Infomation

pacid=37435097 locus=PGSC0003DMG400022499 ID=PGSC0003DMT400057933.v4.03 annot-version=v4.03
Sequence

ATGAGACGAAGCTTAAGCAAGCTTTCTCACTGCTCTATTGGCCGACCCACCACCGCCTCA
CCGGCTTACGCCTTTTCCACTTTCTCCGGCGGCGGCGGTGGTGGTAGAGGCAGGGGACGA
GGTTCCGATTTCCCAAACTTCGGATTCAGTCCGGGCAAATCCGCATCCGAAGACTCCAAA
CCGGAATCATCGACTCCTACTACTCCTTCTGGAACTGGACATGGACGAGGTCGAGGTAAA
CCATTACCTTCGTCCCCAATTGTTCCCTCATTTTACTCCGTTGTCGATAACCCTAATCCT
CCTGCTGGCCGTGGCCGAGGTGGGATCGGTCCATTTTCTCCACCACCTCAGCCGCAACAG
CAACAACAACAACAGCAGCAGCCACTGAGGAAACCGATTTTCTTCGCGAAGGAAGAAGAA
ACAGCTGATTCAAATTCTAGTTCTTCTGATGCTCCGACACCGAGAGATGATTCAAATCTC
TCTTCTAGTGTAATATCAGTTTTGACTGGTGCGGGGCGAGGGAAGCCCTTGCAAACGGCT
TCTCCTGTCTCTGAGAAGCCTAAGGAAGAGAATCGCCATCTCCGGCCTCGGCAGCAGAAA
GTTGCAGATTCAGGGGAGAGAGCGAGCAGTCCACCTCCCCAGAGGTTGAGTAGGGAGGAT
GCAGTAAAAAAGGCTGTAGGGATATTGTCAAGAAGTGATGATGGTGATGGTGATGGTGAT
GTTGGTGGTGGAAGGGGAATGGGAGGAGGATTTAGAGGGAGGGGTGGTCGTGGTGCGGTG
AGAGGCAGAGGGGGAAGGGGAAGGGGAAGAGGAAGAGGAAGAGGTCGTCGGGATGAGGAG
AGAGGAGATGGTAGTTTGGAGAGTGGCTTTTATCTAGGTGATGATGCTGATGGGGAGAAG
TTGGCTCAGAAGCTTGGACCTGAAGGTATGAATACATTGGCTGAAGGCTTTGAAGAAATG
AGTGCCAGAGTGTTGCCTTCTCCCATGGATGATGCCTACATAGAGGCCCTTCACACTAAC
ATGATGATAGAGTGTGAACCAGAGTACCTGATGGGAGACTTTGAAAGCAATCCTGATATT
GATGAGACACCTCCAATTCCTCTTCGTGATGCTCTTGAAAAAATGAAGCCATTCCTCATG
GCATATGAAGGGATTAAGGATCAAGAAGAGTGGGAGGAAGTCATCAAAGAAACTATGGAG
ACTGTCCCACTTATGAAAGAGATAGTTGATTACTACAGTGGGCCCGATAGAGTAACGGCA
AAGCAACAGCAACAAGAGCTGGAAAGAGTAGCAAAAACTCTTCCAGAAAGTGCACCCAAT
TCAGTAAAGCGGTTCACAGAGCGTGCTGTTCTATCTCTACAGAGCAACCCAGGGTGGGGA
TTTGACAAGAAATGTCAGTTCATGGACAAGGTGGTAATGGAAGCCTCTCAGCATTACAAA
TAG