Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057904
CDS Infomation

pacid=37439055 polypeptide=PGSC0003DMP400038981 locus=PGSC0003DMG400022487 ID=PGSC0003DMT400057904.v4.03 annot-version=v4.03
Sequence

ATGGACTGCAACAAGGATGAGGCCCTAAGGGCCAAAGAGGTTGCGGAGAAGAAAATGTTG
AATAATGACTTTGAAGGGGCTAAAAAGGTTGCAGTGAAAGCAGAACAACTTTACCCTCAA
CTAGAGAACATATCCCAGTTACTTGCCGTCTGTAATGTTCACTGTTCAGCTCAAAATAAC
AGAGTAGGATCAGAAAGGGACTGGTACGGGATTCTTCAAATTGATAGGTTGTCTGATGAA
GCGACTATCAAGAAACAATATCGGAGACTTGCACTCATGCTTCATCCTGACAAGAATAAG
TTACCTGGAGCAGAGGCAGCTTTCAAGCTAATTGTGGAAGCAAATATGGTTCTCTCAGAC
CAAGTCAAAAGGTCTTTATACGATAATAAGTACAGAGTTATGTCCGGAGCTGGAGTAGCA
AAGCCACCGCCTCATATGGTTAATCAAAATTCATTCCTTAGGAAAACCAACATGCAAAAT
GGTTTCAATGCTCAGTTCAGTAATCTAAATCACCATAAATATACGCAACCAACTTCATCT
GCAATGCAGGAAACGTTCTGGACGCAATGTCCCTCTTGCAAAATTAGGTACCAGTATTAC
AGTACTTATGTGAACAGTACTCTACGCTGCCAGAAATGCTCGAAGTCTTTCACTGCATAT
AATTTAGGTTTTCAAGGTCCCCCTTGTGGACCCAAATGGAGTAAACCTGGAGGTCAGGAT
GTGCCCCTTAAATCTAATCTCAACCAGTCGTCAGAGCAGAAAGAGCTTCCTAACCAAGGA
GCTTCGAAAATGACTTCAGGCAGTGCCGGGTTTCCACCCACCCAAATGGGATACCGACCA
GGTTGTAGCAGCAGAACAGCAGGGTCTGAACCAGAAAAATGCAGAGGAAAGACTGCTCCA
GTGTTTGAGGATGTAAGGACCAAACAAAAAGATGAAAAACATGAAAACCTAAAGAGAGGT
ATGAGAGAAGGACGTTCAAAGCCAAAGGTGGATCGCAAAAGCAGGAAAAGAGGTCGGAAA
CAGACAGTTGAGTCGAGTGAGAGCGATGATACTTCAACCAGTGTGGAGACAGAGGATGTG
GACATTGATAATGGAAACAATCCACCTGCTGAACAAGGAAATGGAGTTGATGGCTATGGC
GCTAGGAGATCTTCAAGGCGTAGGCAGCATATTTCATACAGTGAAGGTGTAAGTGATGAT
GAGAATGAGTTGGCAAGCCCTCTGAAGAAGGCACGGTCTAACCAGTCAGCTGGAGACAGC
AAAACTCAGCCGAAAGAAGCTGTTGGTGGTGATGATCAACATCGAGCCGATTTCACTATT
CCGCGCAGTAATTCTGTGGAAAGATTAAATCAAAATGGAGCAGGCCTTCCTGAAGGAGAT
GTGCAAAACAACAATTCCAAGTTTGAGACAGCTGAGGACCAGTCTTCTAGACCGCCCTCA
GGTGGCGCAAAAAAAGTTGAACTTATTGTGGATTCTGATTCAGAACCAGATACAGTTCCT
GATAGTAATATTCCAGAGATGTATGATTATCCTGATCCTGAATTTAGTGATTTTGACAAG
CTTAAAGAACAAAATTGCTTTGCACCTGATCAGGTCTGGGCTTGCTATGATACAGCTGAT
GGCATGCCAAGATTCTATGCCCACATTAGGAAGGTACACAGTCCTGAATTTAAGGTGATG
TTCTGTTGGCTTGAGGCTTCCCCTGAAGATCAAAGAGGCAGAGCTTGGGTCAGCGCAGAG
TTGCCTGTTGGCTGTGGGAAATTTAGACTTGGGAGTACTGAATCCACTTCTGATCGACTT
ACATTTTCTCATCAAGTGCAGTGCGAAATGGTCAAGAGGGGTCTGTACATTGTTTATCCT
AGGAAAGGGGAAACATGGGCCCTTTTCAAAGATTGGGATATTGGTTGGGGCTCTGATCCA
GATAATCATAGGAAGTACAAGTATGAAATTGTGGAGATCCTGTCTGATTATGTTGTGGAT
GAGGGTGTCCAAGTTGGTTACTTGGATAAAGTGACCAGATTTGTTAGCCTTTTCCAGCGA
TCAAGGCTGACTGAAGTTGGTACATTCTATGTAAAGCCAAATGAACTTTTCAAGTTCTCT
CATCGAATTCCTTCTTTCAAAATGACTGGAACTGAACGAGATGGTGTACCTGCGGGATCC
TTTGAACTTGATCCTGCTTCTTTACCCCTCAACCCAGATGATATTTGGTACCCTGAAAAG
GTTATGGAAGGCAGTAAGGGTGCAAATTCTGAACCTGTAGAAAATGTTTCACCTGCAGTT
TCATCTGGAAATAGAGATAAGTCTAGAAAGTCTGAGAATGTGACGATATCTCTGAAGTCT
GTGGAGTTGAAAAGCATTCATGCTGCTAATGGAGAATCTGCTAAGGTTCGAAGATCTCCT
AGAGGAGTGAACCTATCCGAGGAAAAACAAAGTAAGATGAGCTCTCATTCTGCCAATGAC
GGTTCTTCCACTTATTTTGATGATATTTGTGTTAAAAGAGACCGTCACTCAAGTCATGAC
ACTGATGAAGAGTTGCATTCATGCACGAAGAGCTTTGATCTCAGCAACTCTTCTGGAAGC
TCCAAGAATCCAATAACTTTTCCCGATGATAAAGGTTCTGAAGAAGCTTTTTGTGATTTT
AGGAGGGATATATCCCCGGGGAAGTTTCAAGTAGATCAGGTATGGGCTCTTTGTGGTCGA
AATAGTATGCCAAGGACTTATGCTCAGATTAAGAAGATTGTTCCTGCCCCATTCAAATTG
CATGCAGTCCTACTTGAGGCGTGTGCAGGACCTAAAAATGCTCAGGTTGTTTGTGGAACA
TTCAAAGTCCAGAGTGAAAAGCGTCAAGTCTATGCTCCTAGTTCATTCTCCCATGTGGTG
AAAGCAGTATCTATTAATAGGAACAGATTTGAGATCTATCCAAGAGAAGGCGATATCTGG
GCACTGTACAAGAACTGGAAAAAATTAAGTTTGCATCCAGACACGTCTGCGTATGAGATA
GTGGAGGTCATTGAGAATTCAAAAGACCGGATAAAAGTTTCATCCATGGTGCGTGTGAAT
GGTTTCAAGTCAGTCTTTAGGTCTCCAAGAATACAAAGATCGAATCCTGCTATTCTAGAA
ATACCTAAAGATGAATTTGGGAGATTTTCTCATCAGATTCCTGCATTTCAGTTGACTGGG
GAAAAAGGAGGGGTTTTGAGAGGCTGCTGGGAGCTTGATCCTGCTTCAGCACCGTGTTTG
CAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038981
PEP Infomation

pacid=37439055 transcript=PGSC0003DMT400057904 locus=PGSC0003DMG400022487 ID=PGSC0003DMT400057904.v4.03 annot-version=v4.03
Sequence

MDCNKDEALRAKEVAEKKMLNNDFEGAKKVAVKAEQLYPQLENISQLLAVCNVHCSAQNN
RVGSERDWYGILQIDRLSDEATIKKQYRRLALMLHPDKNKLPGAEAAFKLIVEANMVLSD
QVKRSLYDNKYRVMSGAGVAKPPPHMVNQNSFLRKTNMQNGFNAQFSNLNHHKYTQPTSS
AMQETFWTQCPSCKIRYQYYSTYVNSTLRCQKCSKSFTAYNLGFQGPPCGPKWSKPGGQD
VPLKSNLNQSSEQKELPNQGASKMTSGSAGFPPTQMGYRPGCSSRTAGSEPEKCRGKTAP
VFEDVRTKQKDEKHENLKRGMREGRSKPKVDRKSRKRGRKQTVESSESDDTSTSVETEDV
DIDNGNNPPAEQGNGVDGYGARRSSRRRQHISYSEGVSDDENELASPLKKARSNQSAGDS
KTQPKEAVGGDDQHRADFTIPRSNSVERLNQNGAGLPEGDVQNNNSKFETAEDQSSRPPS
GGAKKVELIVDSDSEPDTVPDSNIPEMYDYPDPEFSDFDKLKEQNCFAPDQVWACYDTAD
GMPRFYAHIRKVHSPEFKVMFCWLEASPEDQRGRAWVSAELPVGCGKFRLGSTESTSDRL
TFSHQVQCEMVKRGLYIVYPRKGETWALFKDWDIGWGSDPDNHRKYKYEIVEILSDYVVD
EGVQVGYLDKVTRFVSLFQRSRLTEVGTFYVKPNELFKFSHRIPSFKMTGTERDGVPAGS
FELDPASLPLNPDDIWYPEKVMEGSKGANSEPVENVSPAVSSGNRDKSRKSENVTISLKS
VELKSIHAANGESAKVRRSPRGVNLSEEKQSKMSSHSANDGSSTYFDDICVKRDRHSSHD
TDEELHSCTKSFDLSNSSGSSKNPITFPDDKGSEEAFCDFRRDISPGKFQVDQVWALCGR
NSMPRTYAQIKKIVPAPFKLHAVLLEACAGPKNAQVVCGTFKVQSEKRQVYAPSSFSHVV
KAVSINRNRFEIYPREGDIWALYKNWKKLSLHPDTSAYEIVEVIENSKDRIKVSSMVRVN
GFKSVFRSPRIQRSNPAILEIPKDEFGRFSHQIPAFQLTGEKGGVLRGCWELDPASAPCL
Q*

Transcript Sequence

Transcript ID

PGSC0003DMT400057904
Transcript Infomation

pacid=37439055 locus=PGSC0003DMG400022487 ID=PGSC0003DMT400057904.v4.03 annot-version=v4.03
Sequence

ATGGACTGCAACAAGGATGAGGCCCTAAGGGCCAAAGAGGTTGCGGAGAAGAAAATGTTG
AATAATGACTTTGAAGGGGCTAAAAAGGTTGCAGTGAAAGCAGAACAACTTTACCCTCAA
CTAGAGAACATATCCCAGTTACTTGCCGTCTGTAATGTTCACTGTTCAGCTCAAAATAAC
AGAGTAGGATCAGAAAGGGACTGGTACGGGATTCTTCAAATTGATAGGTTGTCTGATGAA
GCGACTATCAAGAAACAATATCGGAGACTTGCACTCATGCTTCATCCTGACAAGAATAAG
TTACCTGGAGCAGAGGCAGCTTTCAAGCTAATTGTGGAAGCAAATATGGTTCTCTCAGAC
CAAGTCAAAAGGTCTTTATACGATAATAAGTACAGAGTTATGTCCGGAGCTGGAGTAGCA
AAGCCACCGCCTCATATGGTTAATCAAAATTCATTCCTTAGGAAAACCAACATGCAAAAT
GGTTTCAATGCTCAGTTCAGTAATCTAAATCACCATAAATATACGCAACCAACTTCATCT
GCAATGCAGGAAACGTTCTGGACGCAATGTCCCTCTTGCAAAATTAGGTACCAGTATTAC
AGTACTTATGTGAACAGTACTCTACGCTGCCAGAAATGCTCGAAGTCTTTCACTGCATAT
AATTTAGGTTTTCAAGGTCCCCCTTGTGGACCCAAATGGAGTAAACCTGGAGGTCAGGAT
GTGCCCCTTAAATCTAATCTCAACCAGTCGTCAGAGCAGAAAGAGCTTCCTAACCAAGGA
GCTTCGAAAATGACTTCAGGCAGTGCCGGGTTTCCACCCACCCAAATGGGATACCGACCA
GGTTGTAGCAGCAGAACAGCAGGGTCTGAACCAGAAAAATGCAGAGGAAAGACTGCTCCA
GTGTTTGAGGATGTAAGGACCAAACAAAAAGATGAAAAACATGAAAACCTAAAGAGAGGT
ATGAGAGAAGGACGTTCAAAGCCAAAGGTGGATCGCAAAAGCAGGAAAAGAGGTCGGAAA
CAGACAGTTGAGTCGAGTGAGAGCGATGATACTTCAACCAGTGTGGAGACAGAGGATGTG
GACATTGATAATGGAAACAATCCACCTGCTGAACAAGGAAATGGAGTTGATGGCTATGGC
GCTAGGAGATCTTCAAGGCGTAGGCAGCATATTTCATACAGTGAAGGTGTAAGTGATGAT
GAGAATGAGTTGGCAAGCCCTCTGAAGAAGGCACGGTCTAACCAGTCAGCTGGAGACAGC
AAAACTCAGCCGAAAGAAGCTGTTGGTGGTGATGATCAACATCGAGCCGATTTCACTATT
CCGCGCAGTAATTCTGTGGAAAGATTAAATCAAAATGGAGCAGGCCTTCCTGAAGGAGAT
GTGCAAAACAACAATTCCAAGTTTGAGACAGCTGAGGACCAGTCTTCTAGACCGCCCTCA
GGTGGCGCAAAAAAAGTTGAACTTATTGTGGATTCTGATTCAGAACCAGATACAGTTCCT
GATAGTAATATTCCAGAGATGTATGATTATCCTGATCCTGAATTTAGTGATTTTGACAAG
CTTAAAGAACAAAATTGCTTTGCACCTGATCAGGTCTGGGCTTGCTATGATACAGCTGAT
GGCATGCCAAGATTCTATGCCCACATTAGGAAGGTACACAGTCCTGAATTTAAGGTGATG
TTCTGTTGGCTTGAGGCTTCCCCTGAAGATCAAAGAGGCAGAGCTTGGGTCAGCGCAGAG
TTGCCTGTTGGCTGTGGGAAATTTAGACTTGGGAGTACTGAATCCACTTCTGATCGACTT
ACATTTTCTCATCAAGTGCAGTGCGAAATGGTCAAGAGGGGTCTGTACATTGTTTATCCT
AGGAAAGGGGAAACATGGGCCCTTTTCAAAGATTGGGATATTGGTTGGGGCTCTGATCCA
GATAATCATAGGAAGTACAAGTATGAAATTGTGGAGATCCTGTCTGATTATGTTGTGGAT
GAGGGTGTCCAAGTTGGTTACTTGGATAAAGTGACCAGATTTGTTAGCCTTTTCCAGCGA
TCAAGGCTGACTGAAGTTGGTACATTCTATGTAAAGCCAAATGAACTTTTCAAGTTCTCT
CATCGAATTCCTTCTTTCAAAATGACTGGAACTGAACGAGATGGTGTACCTGCGGGATCC
TTTGAACTTGATCCTGCTTCTTTACCCCTCAACCCAGATGATATTTGGTACCCTGAAAAG
GTTATGGAAGGCAGTAAGGGTGCAAATTCTGAACCTGTAGAAAATGTTTCACCTGCAGTT
TCATCTGGAAATAGAGATAAGTCTAGAAAGTCTGAGAATGTGACGATATCTCTGAAGTCT
GTGGAGTTGAAAAGCATTCATGCTGCTAATGGAGAATCTGCTAAGGTTCGAAGATCTCCT
AGAGGAGTGAACCTATCCGAGGAAAAACAAAGTAAGATGAGCTCTCATTCTGCCAATGAC
GGTTCTTCCACTTATTTTGATGATATTTGTGTTAAAAGAGACCGTCACTCAAGTCATGAC
ACTGATGAAGAGTTGCATTCATGCACGAAGAGCTTTGATCTCAGCAACTCTTCTGGAAGC
TCCAAGAATCCAATAACTTTTCCCGATGATAAAGGTTCTGAAGAAGCTTTTTGTGATTTT
AGGAGGGATATATCCCCGGGGAAGTTTCAAGTAGATCAGGTATGGGCTCTTTGTGGTCGA
AATAGTATGCCAAGGACTTATGCTCAGATTAAGAAGATTGTTCCTGCCCCATTCAAATTG
CATGCAGTCCTACTTGAGGCGTGTGCAGGACCTAAAAATGCTCAGGTTGTTTGTGGAACA
TTCAAAGTCCAGAGTGAAAAGCGTCAAGTCTATGCTCCTAGTTCATTCTCCCATGTGGTG
AAAGCAGTATCTATTAATAGGAACAGATTTGAGATCTATCCAAGAGAAGGCGATATCTGG
GCACTGTACAAGAACTGGAAAAAATTAAGTTTGCATCCAGACACGTCTGCGTATGAGATA
GTGGAGGTCATTGAGAATTCAAAAGACCGGATAAAAGTTTCATCCATGGTGCGTGTGAAT
GGTTTCAAGTCAGTCTTTAGGTCTCCAAGAATACAAAGATCGAATCCTGCTATTCTAGAA
ATACCTAAAGATGAATTTGGGAGATTTTCTCATCAGATTCCTGCATTTCAGTTGACTGGG
GAAAAAGGAGGGGTTTTGAGAGGCTGCTGGGAGCTTGATCCTGCTTCAGCACCGTGTTTG
CAGTAA