Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057865
CDS Infomation

pacid=37440480 polypeptide=PGSC0003DMP400038959 locus=PGSC0003DMG400022473 ID=PGSC0003DMT400057865.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTCTTCAGCTTATCTTTGTTGTCCTGCGACTTCTGCTACGGGAAAGAAACAT
GTTTTCCCAAATGGGTCACCTGGATTCTTGGTTTTTGGTGGTACCCGTTTGTCCAACCGG
TTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGGACTCTATGGTCTCTGATATGAGT
ACCAACGCTCCAAAAGGGCTATTTCCACCTGAGCCTGAACATTATCGGGGGCCAAAGCTG
AAAGTAGCTATTATTGGAGCTGGACTTGCAGGCATGTCGACTGCTGTGGAGCTCTTGGAT
CAAGGACATGAGGTGGATATATACGAATCAAGGACTTTTATTGGTGGGAAAGTGGGTTCT
TTTGTTGATAGACGTGGGAACCACATTGAAATGGGACTGCACGTGTTCTTTGGTTGCTAT
AATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTGAAAAAAATCTGCTAGTGAAGGAG
CATACTCACACATTTGTAAATAAAGGGGGTGAAATAGGGGAGCTTGATTTCCGCTTTCCA
GTTGGAGCACCCTTACATGGAATTAATGCATTTTTGTCTACTAATCAGTTAAAGATTTAT
GATAAAGCTCGAAATGCTGTAGCTCTTGCCCTTAGTCCAGTGGTGCGGGCTTTAGTTGAT
CCGGATGGTGCATTGCAGCAGATACGCAATCTAGATAGTGTAAGCTTTTCTGAGTGGTTT
CTGTCTAAAGGTGGGACGCGTGCTAGCATCCAGAGGATGTGGGATCCTGTTGCATATGCT
CTTGGATTCATTGACTGTGACAACATGAGTGCTCGGTGTATGCTCACTATATTTGCATTG
TTTGCCACAAAAACGGAGGCTTCCCTATTACGCATGCTTAAAGGTTCTCCTGACGTTTAT
TTGAGTGGTCCAATTAAGAAGTACATCATGGACAAGGGGGGCAGGTTCCATCTGAGGTGG
GGATGCAGAGAGGTACTCTATGAGACATCCTCTGATGGAAGCATGTATGTTAGTGGGCTT
GCCATGTCAAAGGCCACTCAGAAGAAAATTGTAAAAGCTGATGCCTATGTGGCTGCATGT
GATGTCCCTGGAATTAAAAGATTGGTACCTCAGAAGTGGAGGGAATTGGAATTCTTTGAC
AACATTTACAAATTGGTCGGAGTGCCTGTTGTTACCGTACAACTACGATACAATGGCTGG
GTTACAGAGTTGCAGGACTTGGAGCGTTCGAGGCAATTGAAGCGCGCTGCAGGTTTGGAC
AATCTCCTGTATACACCAGATGCAGATTTCTCTTGCTTTGCAGATCTTGCATTGGCATCT
CCGGATGATTACTACATTGAGGGACAAGGCTCATTGCTTCAATGTGTCCTTACGCCTGGT
GACCCTTACATGCCTCTACCAAATGATGAAATCATAAAAAGAGTTACAAAGCAGGTTTTG
GCATTATTTCCTTCTTCCCAAGGTCTTGAGGTTACCTGGTCATCAGTTGTGAAGATAGGA
CAATCTTTATATCGTGAAGGGCCTGGTAAAGACCCATTCAGACCTGATCAGAAGACGCCA
GTGGAAAATTTCTTTCTTGCTGGCTCATATACAAAACAGGACTACATCGATAGCATGGAA
GGGGCAACTCTTTCAGGTAGGCAAGCTTCTGCATACATATGTAATGTTGGAGAGCAGCTG
GTGGCGTTGCGGAAAAAGATCACCGCGGCTGAGTTAAACGAGATCTCTAAAGGTGTGTCC
CTATCTGATGAGTTGAGTCTTGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038959
PEP Infomation

pacid=37440480 transcript=PGSC0003DMT400057865 locus=PGSC0003DMG400022473 ID=PGSC0003DMT400057865.v4.03 annot-version=v4.03
Sequence

MATSSAYLCCPATSATGKKHVFPNGSPGFLVFGGTRLSNRLVTRKSVIRADLDSMVSDMS
TNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGS
FVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFP
VGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRNLDSVSFSEWF
LSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVY
LSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAAC
DVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLD
NLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLPNDEIIKRVTKQVL
ALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSME
GATLSGRQASAYICNVGEQLVALRKKITAAELNEISKGVSLSDELSLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400057865
Transcript Infomation

pacid=37440480 locus=PGSC0003DMG400022473 ID=PGSC0003DMT400057865.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTCTTCAGCTTATCTTTGTTGTCCTGCGACTTCTGCTACGGGAAAGAAACAT
GTTTTCCCAAATGGGTCACCTGGATTCTTGGTTTTTGGTGGTACCCGTTTGTCCAACCGG
TTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGGACTCTATGGTCTCTGATATGAGT
ACCAACGCTCCAAAAGGGCTATTTCCACCTGAGCCTGAACATTATCGGGGGCCAAAGCTG
AAAGTAGCTATTATTGGAGCTGGACTTGCAGGCATGTCGACTGCTGTGGAGCTCTTGGAT
CAAGGACATGAGGTGGATATATACGAATCAAGGACTTTTATTGGTGGGAAAGTGGGTTCT
TTTGTTGATAGACGTGGGAACCACATTGAAATGGGACTGCACGTGTTCTTTGGTTGCTAT
AATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTGAAAAAAATCTGCTAGTGAAGGAG
CATACTCACACATTTGTAAATAAAGGGGGTGAAATAGGGGAGCTTGATTTCCGCTTTCCA
GTTGGAGCACCCTTACATGGAATTAATGCATTTTTGTCTACTAATCAGTTAAAGATTTAT
GATAAAGCTCGAAATGCTGTAGCTCTTGCCCTTAGTCCAGTGGTGCGGGCTTTAGTTGAT
CCGGATGGTGCATTGCAGCAGATACGCAATCTAGATAGTGTAAGCTTTTCTGAGTGGTTT
CTGTCTAAAGGTGGGACGCGTGCTAGCATCCAGAGGATGTGGGATCCTGTTGCATATGCT
CTTGGATTCATTGACTGTGACAACATGAGTGCTCGGTGTATGCTCACTATATTTGCATTG
TTTGCCACAAAAACGGAGGCTTCCCTATTACGCATGCTTAAAGGTTCTCCTGACGTTTAT
TTGAGTGGTCCAATTAAGAAGTACATCATGGACAAGGGGGGCAGGTTCCATCTGAGGTGG
GGATGCAGAGAGGTACTCTATGAGACATCCTCTGATGGAAGCATGTATGTTAGTGGGCTT
GCCATGTCAAAGGCCACTCAGAAGAAAATTGTAAAAGCTGATGCCTATGTGGCTGCATGT
GATGTCCCTGGAATTAAAAGATTGGTACCTCAGAAGTGGAGGGAATTGGAATTCTTTGAC
AACATTTACAAATTGGTCGGAGTGCCTGTTGTTACCGTACAACTACGATACAATGGCTGG
GTTACAGAGTTGCAGGACTTGGAGCGTTCGAGGCAATTGAAGCGCGCTGCAGGTTTGGAC
AATCTCCTGTATACACCAGATGCAGATTTCTCTTGCTTTGCAGATCTTGCATTGGCATCT
CCGGATGATTACTACATTGAGGGACAAGGCTCATTGCTTCAATGTGTCCTTACGCCTGGT
GACCCTTACATGCCTCTACCAAATGATGAAATCATAAAAAGAGTTACAAAGCAGGTTTTG
GCATTATTTCCTTCTTCCCAAGGTCTTGAGGTTACCTGGTCATCAGTTGTGAAGATAGGA
CAATCTTTATATCGTGAAGGGCCTGGTAAAGACCCATTCAGACCTGATCAGAAGACGCCA
GTGGAAAATTTCTTTCTTGCTGGCTCATATACAAAACAGGACTACATCGATAGCATGGAA
GGGGCAACTCTTTCAGGTAGGCAAGCTTCTGCATACATATGTAATGTTGGAGAGCAGCTG
GTGGCGTTGCGGAAAAAGATCACCGCGGCTGAGTTAAACGAGATCTCTAAAGGTGTGTCC
CTATCTGATGAGTTGAGTCTTGTCTGA