Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057864
CDS Infomation

pacid=37436230 polypeptide=PGSC0003DMP400038958 locus=PGSC0003DMG400022472 ID=PGSC0003DMT400057864.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGCACCCTTCTTGCTTGAATCAAACCTTAAATGGAACCCTTTGTTGTATACT
CCAAACCCAATACAGTATACCCGTTTAATCCATTATCAAAAGCTTACACCTTCAAAATTC
TCCAAACCCTCTAAGCTGACCGTCAAATGTTTCAGCAAGAATCATAAAAATGTCTGCTTT
AATGATGGAAATGGGTTGGAAATGAAGAATAAAGAAAACCCATTTGAGATAGTTGTCAAA
AGTGTCATGAAAGCTCTCAAAGCGTTGCAGAAGCCAGCTGTAGCGGCTGTATTGGTGGGG
TTGTTGTTGATGTATGATCCGAATTCAGCATTGGCTGCTTCTGGTGGGAGGATAGGTGGC
AAGTCCTTCTCGTCGTCGCGGAGCTCGTCTCCGTCGAGGGGGTATTCTATGAGGACAGCA
GAGCCTAGATTTTCGTATTCAGCTCCGTATTATGCGCCCTCCCCTTTTGGGTTTAGTGGG
GGCGGTGTTTATGTAGGTCCAGCTGTTGGTTTTGGGTCAAGTGCGTTTCTGGTTATGATG
GGCTTTGCTGCGTTTATTATGGTTTCTGGGTTTCTCTCTGATCGGTCTGAGGGCAGTGTA
CTTACTGCTACTGACAAAACTAGTGTGCTCAAGCTACAGGTTGGATTGTTGGGGTTGGGT
AGATCACTTCAAAAGGATCTCAACCGGATTGCTGAAGTGGCAGATACATCCACACCAGAG
GGTTTAAGCTTCGTCCTGACAGAGACGACACTAGCTTTGCTTCGGCACCCTGGTTATTGC
ATATCAGCTTATTCATCTGTTGATGTCAAGAGGAGCATGGAGGAAGGCGAGAATCGATTC
AATCAACTTTCCATTGAGGAACGTGGTAAATTTGATGAAGAGACACTTGTGAATGTTAAC
AACATCAGAAGGAAAAGCTCTACTAGCCAGAGGGCAAGTGGATTTAGCAATGAATACATA
GTGGTTACAATCTTGGTAGCTGCTGAAGGTGTTTATAAATTGCCTACTATTAACGGAAGT
GGAGACTTGAAAGAAGCGTTGCAAAAGATTGCTTCTATTCCTTCCAGTAGAACACTGGCA
GTTGAGATTCTATGGACTCCACAGAACGAAAACGACACATTATCAGAACGAGAACTTCTT
GAGGATTACCCTCTCTTGCGACCTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038958
PEP Infomation

pacid=37436230 transcript=PGSC0003DMT400057864 locus=PGSC0003DMG400022472 ID=PGSC0003DMT400057864.v4.03 annot-version=v4.03
Sequence

MAAAPFLLESNLKWNPLLYTPNPIQYTRLIHYQKLTPSKFSKPSKLTVKCFSKNHKNVCF
NDGNGLEMKNKENPFEIVVKSVMKALKALQKPAVAAVLVGLLLMYDPNSALAASGGRIGG
KSFSSSRSSSPSRGYSMRTAEPRFSYSAPYYAPSPFGFSGGGVYVGPAVGFGSSAFLVMM
GFAAFIMVSGFLSDRSEGSVLTATDKTSVLKLQVGLLGLGRSLQKDLNRIAEVADTSTPE
GLSFVLTETTLALLRHPGYCISAYSSVDVKRSMEEGENRFNQLSIEERGKFDEETLVNVN
NIRRKSSTSQRASGFSNEYIVVTILVAAEGVYKLPTINGSGDLKEALQKIASIPSSRTLA
VEILWTPQNENDTLSERELLEDYPLLRPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057864
Transcript Infomation

pacid=37436230 locus=PGSC0003DMG400022472 ID=PGSC0003DMT400057864.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGCACCCTTCTTGCTTGAATCAAACCTTAAATGGAACCCTTTGTTGTATACT
CCAAACCCAATACAGTATACCCGTTTAATCCATTATCAAAAGCTTACACCTTCAAAATTC
TCCAAACCCTCTAAGCTGACCGTCAAATGTTTCAGCAAGAATCATAAAAATGTCTGCTTT
AATGATGGAAATGGGTTGGAAATGAAGAATAAAGAAAACCCATTTGAGATAGTTGTCAAA
AGTGTCATGAAAGCTCTCAAAGCGTTGCAGAAGCCAGCTGTAGCGGCTGTATTGGTGGGG
TTGTTGTTGATGTATGATCCGAATTCAGCATTGGCTGCTTCTGGTGGGAGGATAGGTGGC
AAGTCCTTCTCGTCGTCGCGGAGCTCGTCTCCGTCGAGGGGGTATTCTATGAGGACAGCA
GAGCCTAGATTTTCGTATTCAGCTCCGTATTATGCGCCCTCCCCTTTTGGGTTTAGTGGG
GGCGGTGTTTATGTAGGTCCAGCTGTTGGTTTTGGGTCAAGTGCGTTTCTGGTTATGATG
GGCTTTGCTGCGTTTATTATGGTTTCTGGGTTTCTCTCTGATCGGTCTGAGGGCAGTGTA
CTTACTGCTACTGACAAAACTAGTGTGCTCAAGCTACAGGTTGGATTGTTGGGGTTGGGT
AGATCACTTCAAAAGGATCTCAACCGGATTGCTGAAGTGGCAGATACATCCACACCAGAG
GGTTTAAGCTTCGTCCTGACAGAGACGACACTAGCTTTGCTTCGGCACCCTGGTTATTGC
ATATCAGCTTATTCATCTGTTGATGTCAAGAGGAGCATGGAGGAAGGCGAGAATCGATTC
AATCAACTTTCCATTGAGGAACGTGGTAAATTTGATGAAGAGACACTTGTGAATGTTAAC
AACATCAGAAGGAAAAGCTCTACTAGCCAGAGGGCAAGTGGATTTAGCAATGAATACATA
GTGGTTACAATCTTGGTAGCTGCTGAAGGTGTTTATAAATTGCCTACTATTAACGGAAGT
GGAGACTTGAAAGAAGCGTTGCAAAAGATTGCTTCTATTCCTTCCAGTAGAACACTGGCA
GTTGAGATTCTATGGACTCCACAGAACGAAAACGACACATTATCAGAACGAGAACTTCTT
GAGGATTACCCTCTCTTGCGACCTCTGTAA