Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057842
CDS Infomation

pacid=37438256 polypeptide=PGSC0003DMP400038945 locus=PGSC0003DMG400022459 ID=PGSC0003DMT400057842.v4.03 annot-version=v4.03
Sequence

ATGTTTATTTCTACTGAAGATGAAAATATGCCATTGCCTTTGGAAAATGGGAAAGCTTTG
GAGAATTCTTCTCCAGTAGGATCAAATCCAGATTCCAATGATGATGAGCCTTCCCAAGAG
ATTCCTTCAACTTTCACAGATGTCAATGTGGTTCAAGAAGATGAAAAGTTTCAGCTTGAG
CAGAGGATTTTGAATTTAGAAGGTGAAATTGCGAGTTTGAGGCATAAAGAGAGATCTTTG
GATGAAAAAAGAAGAGAGGCATTGAATAAGATACTAGACATTAAAGGTTGCATTCGGGTG
TTTTCCCGAGTTAGACCATTTTCACCAACAGATAAACAGAGAACTCATCAGCCGATTTCT
GTTGAATCGGAGAAGATTGTAGTAAGATCTGGTGGAAGCAGGAAAGAATTTGAATTTGAC
AAGGTTTTCCCTCAGGAATCACTCCAAGAAGATGTTTTTGCTGAGGTTGAGCCAATTATC
AGATCTGCACTTGATGGGCACAATGTATGTATATTAGCTTATGGACAAACTGGAACTGGC
AAGACATATACTATGGAGGGAATCACAGAGTCTCCAGGGATCATTCCTCGTGTTCTTCAG
GAGCTTTTTAACCTTTCCTCTTTAGATAGCTCAATTTCATTTACATTTTCGATTAGCATG
CTCGAAGTCTATTTGGGCAGTATAAGGGATTTGCTTGCTCCAAGACCTTCCAGTCGTAAA
TACACTGCATCGAGATGCAATCTAAACATTCAAACAGATTCAAAAGGATCAGTTGAAATC
GATGGTTTAACTGAGGTAGAAATCTCTAATTTTACGAAAGCAAAATGGTGGTATCATAAG
GGGAGGCGAGTTAGATCCACATCATGGACGAATGTAAATGAAACATCCAGCAGATCGCAT
TGCTTGACGAGGATCAGTATATATCGCTATGGGGATACTTTGGGAGGTAAACCAGAAGCA
ACCAAACTGTGGATGGTTGATCTTGGAGGGAGTGAGCGCCTACTTAAAACGGGAGCTACT
GGACAAACCCTTGACGAGGGGAGGGCGATAAATCTCTCTCTTTCTGCACTAGGTGATGTT
ATTGCAGCTCTTAGAAGAAAGAAAGGCCACGTTCCTTATAGAAATAGCAAATTGACACAA
GTTCTCAAGGATTCTTTAGGTGATAAATCAAAAGTTTTGATGGTAGTCCATGTTAGCCCA
TACGAAGAGGATGTTGGAGAGACAACATGCTCCTGTACCTTTGCAAAGAGAGCAAGAGCA
GCGGAATGCAATAGAGAGCTCTCAGAAGAATCAAAGAAGCAAAGAGAAAAGAGGATCGCG
GAGCTTGAGGAGCAAATGAAGGAAGCTGAAGAAGGATGTACAGATCTTAGTACTCAAATA
CAGAAGGCTGATTTTTTATTGAGTGAAAACAAAAGGCTTTTCATGAAGAAATATCAGCCA
CTTGAAGATGAAGAAACCTTTCCTATAACCCCAAAGGAAAACGTCCCTGAAATCACAGTA
ACTCCAAGAAACTCTGAGAAGGGACTAAAAATAAATGTCACTAGCTCGGTGCCTCGATTC
ATGAGTTCCACGGTTGCCAGTCGAATAAGAGAGACTACAGCAGAAAAGGAAATCCATAGC
AGACCAAAAAGTGTGAGATCATGGGCTAGGAGCTCTATGCAAATTTCTGGTTCACAATCA
AACAGCTTTGATCGTCGTTTCAAAGCTCACCTACGGACTTCAAATAAAAGATCACGTTAT
AGTGAAATTAATACCATGGCTGGGGATATTAAGTATGGTGATGATTCAGATATTAAGCCA
TCTGTCTTACCACAAAGCAAGACTATCGCGCCCTCGGATCCAAAGCCTAGAAAACCACTA
GCTCACCACAGAAGAAGGATGTCTGATCTGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038945
PEP Infomation

pacid=37438256 transcript=PGSC0003DMT400057842 locus=PGSC0003DMG400022459 ID=PGSC0003DMT400057842.v4.03 annot-version=v4.03
Sequence

MFISTEDENMPLPLENGKALENSSPVGSNPDSNDDEPSQEIPSTFTDVNVVQEDEKFQLE
QRILNLEGEIASLRHKERSLDEKRREALNKILDIKGCIRVFSRVRPFSPTDKQRTHQPIS
VESEKIVVRSGGSRKEFEFDKVFPQESLQEDVFAEVEPIIRSALDGHNVCILAYGQTGTG
KTYTMEGITESPGIIPRVLQELFNLSSLDSSISFTFSISMLEVYLGSIRDLLAPRPSSRK
YTASRCNLNIQTDSKGSVEIDGLTEVEISNFTKAKWWYHKGRRVRSTSWTNVNETSSRSH
CLTRISIYRYGDTLGGKPEATKLWMVDLGGSERLLKTGATGQTLDEGRAINLSLSALGDV
IAALRRKKGHVPYRNSKLTQVLKDSLGDKSKVLMVVHVSPYEEDVGETTCSCTFAKRARA
AECNRELSEESKKQREKRIAELEEQMKEAEEGCTDLSTQIQKADFLLSENKRLFMKKYQP
LEDEETFPITPKENVPEITVTPRNSEKGLKINVTSSVPRFMSSTVASRIRETTAEKEIHS
RPKSVRSWARSSMQISGSQSNSFDRRFKAHLRTSNKRSRYSEINTMAGDIKYGDDSDIKP
SVLPQSKTIAPSDPKPRKPLAHHRRRMSDLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057842
Transcript Infomation

pacid=37438256 locus=PGSC0003DMG400022459 ID=PGSC0003DMT400057842.v4.03 annot-version=v4.03
Sequence

ATGTTTATTTCTACTGAAGATGAAAATATGCCATTGCCTTTGGAAAATGGGAAAGCTTTG
GAGAATTCTTCTCCAGTAGGATCAAATCCAGATTCCAATGATGATGAGCCTTCCCAAGAG
ATTCCTTCAACTTTCACAGATGTCAATGTGGTTCAAGAAGATGAAAAGTTTCAGCTTGAG
CAGAGGATTTTGAATTTAGAAGGTGAAATTGCGAGTTTGAGGCATAAAGAGAGATCTTTG
GATGAAAAAAGAAGAGAGGCATTGAATAAGATACTAGACATTAAAGGTTGCATTCGGGTG
TTTTCCCGAGTTAGACCATTTTCACCAACAGATAAACAGAGAACTCATCAGCCGATTTCT
GTTGAATCGGAGAAGATTGTAGTAAGATCTGGTGGAAGCAGGAAAGAATTTGAATTTGAC
AAGGTTTTCCCTCAGGAATCACTCCAAGAAGATGTTTTTGCTGAGGTTGAGCCAATTATC
AGATCTGCACTTGATGGGCACAATGTATGTATATTAGCTTATGGACAAACTGGAACTGGC
AAGACATATACTATGGAGGGAATCACAGAGTCTCCAGGGATCATTCCTCGTGTTCTTCAG
GAGCTTTTTAACCTTTCCTCTTTAGATAGCTCAATTTCATTTACATTTTCGATTAGCATG
CTCGAAGTCTATTTGGGCAGTATAAGGGATTTGCTTGCTCCAAGACCTTCCAGTCGTAAA
TACACTGCATCGAGATGCAATCTAAACATTCAAACAGATTCAAAAGGATCAGTTGAAATC
GATGGTTTAACTGAGGTAGAAATCTCTAATTTTACGAAAGCAAAATGGTGGTATCATAAG
GGGAGGCGAGTTAGATCCACATCATGGACGAATGTAAATGAAACATCCAGCAGATCGCAT
TGCTTGACGAGGATCAGTATATATCGCTATGGGGATACTTTGGGAGGTAAACCAGAAGCA
ACCAAACTGTGGATGGTTGATCTTGGAGGGAGTGAGCGCCTACTTAAAACGGGAGCTACT
GGACAAACCCTTGACGAGGGGAGGGCGATAAATCTCTCTCTTTCTGCACTAGGTGATGTT
ATTGCAGCTCTTAGAAGAAAGAAAGGCCACGTTCCTTATAGAAATAGCAAATTGACACAA
GTTCTCAAGGATTCTTTAGGTGATAAATCAAAAGTTTTGATGGTAGTCCATGTTAGCCCA
TACGAAGAGGATGTTGGAGAGACAACATGCTCCTGTACCTTTGCAAAGAGAGCAAGAGCA
GCGGAATGCAATAGAGAGCTCTCAGAAGAATCAAAGAAGCAAAGAGAAAAGAGGATCGCG
GAGCTTGAGGAGCAAATGAAGGAAGCTGAAGAAGGATGTACAGATCTTAGTACTCAAATA
CAGAAGGCTGATTTTTTATTGAGTGAAAACAAAAGGCTTTTCATGAAGAAATATCAGCCA
CTTGAAGATGAAGAAACCTTTCCTATAACCCCAAAGGAAAACGTCCCTGAAATCACAGTA
ACTCCAAGAAACTCTGAGAAGGGACTAAAAATAAATGTCACTAGCTCGGTGCCTCGATTC
ATGAGTTCCACGGTTGCCAGTCGAATAAGAGAGACTACAGCAGAAAAGGAAATCCATAGC
AGACCAAAAAGTGTGAGATCATGGGCTAGGAGCTCTATGCAAATTTCTGGTTCACAATCA
AACAGCTTTGATCGTCGTTTCAAAGCTCACCTACGGACTTCAAATAAAAGATCACGTTAT
AGTGAAATTAATACCATGGCTGGGGATATTAAGTATGGTGATGATTCAGATATTAAGCCA
TCTGTCTTACCACAAAGCAAGACTATCGCGCCCTCGGATCCAAAGCCTAGAAAACCACTA
GCTCACCACAGAAGAAGGATGTCTGATCTGCTCTAA