Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057800
CDS Infomation

pacid=37426618 polypeptide=PGSC0003DMP400038914 locus=PGSC0003DMG400022439 ID=PGSC0003DMT400057800.v4.03 annot-version=v4.03
Sequence

ATGAATACCCTTATCTCAAAAAGATTCTATCTTCAAATTTTCCCTCAAAATTTTCTCTTT
CACTTTCCACAACTTTCCAAGAAAACCCCACATAACACTAATCCATTTCCAAGAAAATTT
TCATATACTGCTAAGACTCTAACGTTATGCTCTGTTACAGCTTCTGAGTCATTATCTTGT
GGTGGCTGGGATGACCCAAGTTTCATTGGTGATCCAATTAACCCTGGTGAGTCCAACCAG
CTTCATAGTTTTCTTAATAAACTAGGAATTAATGATAAAAAGTTTGTCTTTGTGTACCTC
TTGGGGTTTGTTTGTGCTTTGGCTATTTCAAGGGTGAAAGTTTCCTCAATCATAGCAATT
CCTGGTTGTGTTATTGTTTTTGCACTTGGGTTTTCAATTGGGGTTTTTAATGGTGGTAAA
ATGAACTTAGATGGTAATAAGAGATTGCATCAAGACCAGATTTTTAAAGATTTTATTGAG
AAACTAAGGGTTTTGGTGGATTTTCTTAGTGGGGTAGATGTGGAGATTGGTAATTTGAAG
AAGGGTGTTGGGAAAGGTATTGAGTGTAATCAAATTACTGTGAATGATTTGCAAAGTTTC
GAAAAGAGTCTGGAATCTATGAATTTTTCTGCTCTCAATGCTAGAAAGGTTATAGAAGGT
TGTATTGAAAGTTTGTCAATTGAAGGCCAAGAAATAGGGGGGAAAATCAGTCAAAAATCG
AGTAAGAAGAAGAAGGAGCCGGGTAAATATGGCTTCGACTTCTTTCAGATTGCTGCTGGT
TTGTTTCAAACAAAGTCTGGTTCGAAGTCTAGTAAAATGAAAGATCATGGTGAGACTGAG
TTGATGGACAGAAAGATGAATGGCTCTAAGCAAGGGAATATCTTGAGTTCTGCTACTAAA
GAAAGACATTTGAATTTTGATATGGATCTAGACGGCCATAGTGGCACTTCAAGGCGCAGT
TTCGATGATGATGCCATTAGACAAGACAGAGTGGGTGAGACATTTGGGAAGGCTAGCAGA
ATGAATGTAGTTTCTGATGGAAATTTCAATTTTTCCGAGATGGATAGTAACACTGTTAAA
TCAGTTTTCAACAGAGAAGAATATAGTTACCAGACAAGTAGAGTACAATTTAGGAGTAAC
CAACAGGTGTCTCATAGAATGAGTCATCCTAGTAAATTTGAATCTTGGGCTTCTGATGAT
GGTTTAGCTGATTCTATTGATTTTAGCATCAGTATGGAGCAAAGTAAAGCTGAAGCATCT
TCGTTGCATGAAAAGGAGGTCGAGAATTTTGAAGGAGTAAGGAGCCATTTTGGTGGAAAA
GAAAATGATGAAGACACCTACAGGCATTTTCTTGGAGAGGAGATGAGAAATCATGAAAAG
GAACCCTCCATGGATAGAGATGAGGCCTCAAATGAATTTGAATTTGGTCACTCTCCATCT
TCAGCAGGTTCCATTGATTTGCAATTTAATAAGTACCTTACTGAAGCTAATTTTCTTGTA
CAAGAAGCAAAGGACTGTTTAAGGAGGCAAGACGGTGACAAACATGCTGAGAACGCGTTT
TACGAGTCTGCCATATTGCTCTCAAAAGCTATAGATATCCGGCCCATGAGTTTATTGGCT
GTGGGACAGTTGGGAAATACTTACCTTCTTCATGGAGAACTTAAGTTAAGGATCAGCCGT
GATTTGAGAGCTTTACTAACTGATGCTGTATCATTGAATAAACGGGCTAAAATACGTGAT
GCGCTAGATGATACGGTTCCAAGGGAAGACAAAATTACATCTTATCTTGTAAATGTATGT
GAAGAGTGTGAAGAACTACTTGTTAAGGCAGGAAGACAGTATAGGTTTGCCTTGTCGATA
GATGGGAATGATATGAGAGCCTTGTATAATTGGGGGATTGCTCTCTCGTTGCGTGGGCAG
TTGATTGCAGACATTGGACCTGGTGCTGCACGTGATGCTGACAAAGTTTTCTTGGCTGCA
ATTGATAAGTTCGATGCAATGATCTCCAGAGGAAATGTATATGCACCTGATGCTCTTTTC
AGATGGGCCACAGCATTGCAGCACAGATCTCGCCTACGGCCTAGAACAAGTAGAGAGAAG
GTGAAGTTATTGCAGCAGGCTCAAAGGCTATACAAAGATGCCCTTCATATGGACTCCGAT
AACCTTCAAGCACAAAAGGCCTTGTCATCCTGTATATCTGAGCTCAAGTACTGGTATAGA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400038914
PEP Infomation

pacid=37426618 transcript=PGSC0003DMT400057800 locus=PGSC0003DMG400022439 ID=PGSC0003DMT400057800.v4.03 annot-version=v4.03
Sequence

MNTLISKRFYLQIFPQNFLFHFPQLSKKTPHNTNPFPRKFSYTAKTLTLCSVTASESLSC
GGWDDPSFIGDPINPGESNQLHSFLNKLGINDKKFVFVYLLGFVCALAISRVKVSSIIAI
PGCVIVFALGFSIGVFNGGKMNLDGNKRLHQDQIFKDFIEKLRVLVDFLSGVDVEIGNLK
KGVGKGIECNQITVNDLQSFEKSLESMNFSALNARKVIEGCIESLSIEGQEIGGKISQKS
SKKKKEPGKYGFDFFQIAAGLFQTKSGSKSSKMKDHGETELMDRKMNGSKQGNILSSATK
ERHLNFDMDLDGHSGTSRRSFDDDAIRQDRVGETFGKASRMNVVSDGNFNFSEMDSNTVK
SVFNREEYSYQTSRVQFRSNQQVSHRMSHPSKFESWASDDGLADSIDFSISMEQSKAEAS
SLHEKEVENFEGVRSHFGGKENDEDTYRHFLGEEMRNHEKEPSMDRDEASNEFEFGHSPS
SAGSIDLQFNKYLTEANFLVQEAKDCLRRQDGDKHAENAFYESAILLSKAIDIRPMSLLA
VGQLGNTYLLHGELKLRISRDLRALLTDAVSLNKRAKIRDALDDTVPREDKITSYLVNVC
EECEELLVKAGRQYRFALSIDGNDMRALYNWGIALSLRGQLIADIGPGAARDADKVFLAA
IDKFDAMISRGNVYAPDALFRWATALQHRSRLRPRTSREKVKLLQQAQRLYKDALHMDSD
NLQAQKALSSCISELKYWYR*

Transcript Sequence

Transcript ID

PGSC0003DMT400057800
Transcript Infomation

pacid=37426618 locus=PGSC0003DMG400022439 ID=PGSC0003DMT400057800.v4.03 annot-version=v4.03
Sequence

ATGAATACCCTTATCTCAAAAAGATTCTATCTTCAAATTTTCCCTCAAAATTTTCTCTTT
CACTTTCCACAACTTTCCAAGAAAACCCCACATAACACTAATCCATTTCCAAGAAAATTT
TCATATACTGCTAAGACTCTAACGTTATGCTCTGTTACAGCTTCTGAGTCATTATCTTGT
GGTGGCTGGGATGACCCAAGTTTCATTGGTGATCCAATTAACCCTGGTGAGTCCAACCAG
CTTCATAGTTTTCTTAATAAACTAGGAATTAATGATAAAAAGTTTGTCTTTGTGTACCTC
TTGGGGTTTGTTTGTGCTTTGGCTATTTCAAGGGTGAAAGTTTCCTCAATCATAGCAATT
CCTGGTTGTGTTATTGTTTTTGCACTTGGGTTTTCAATTGGGGTTTTTAATGGTGGTAAA
ATGAACTTAGATGGTAATAAGAGATTGCATCAAGACCAGATTTTTAAAGATTTTATTGAG
AAACTAAGGGTTTTGGTGGATTTTCTTAGTGGGGTAGATGTGGAGATTGGTAATTTGAAG
AAGGGTGTTGGGAAAGGTATTGAGTGTAATCAAATTACTGTGAATGATTTGCAAAGTTTC
GAAAAGAGTCTGGAATCTATGAATTTTTCTGCTCTCAATGCTAGAAAGGTTATAGAAGGT
TGTATTGAAAGTTTGTCAATTGAAGGCCAAGAAATAGGGGGGAAAATCAGTCAAAAATCG
AGTAAGAAGAAGAAGGAGCCGGGTAAATATGGCTTCGACTTCTTTCAGATTGCTGCTGGT
TTGTTTCAAACAAAGTCTGGTTCGAAGTCTAGTAAAATGAAAGATCATGGTGAGACTGAG
TTGATGGACAGAAAGATGAATGGCTCTAAGCAAGGGAATATCTTGAGTTCTGCTACTAAA
GAAAGACATTTGAATTTTGATATGGATCTAGACGGCCATAGTGGCACTTCAAGGCGCAGT
TTCGATGATGATGCCATTAGACAAGACAGAGTGGGTGAGACATTTGGGAAGGCTAGCAGA
ATGAATGTAGTTTCTGATGGAAATTTCAATTTTTCCGAGATGGATAGTAACACTGTTAAA
TCAGTTTTCAACAGAGAAGAATATAGTTACCAGACAAGTAGAGTACAATTTAGGAGTAAC
CAACAGGTGTCTCATAGAATGAGTCATCCTAGTAAATTTGAATCTTGGGCTTCTGATGAT
GGTTTAGCTGATTCTATTGATTTTAGCATCAGTATGGAGCAAAGTAAAGCTGAAGCATCT
TCGTTGCATGAAAAGGAGGTCGAGAATTTTGAAGGAGTAAGGAGCCATTTTGGTGGAAAA
GAAAATGATGAAGACACCTACAGGCATTTTCTTGGAGAGGAGATGAGAAATCATGAAAAG
GAACCCTCCATGGATAGAGATGAGGCCTCAAATGAATTTGAATTTGGTCACTCTCCATCT
TCAGCAGGTTCCATTGATTTGCAATTTAATAAGTACCTTACTGAAGCTAATTTTCTTGTA
CAAGAAGCAAAGGACTGTTTAAGGAGGCAAGACGGTGACAAACATGCTGAGAACGCGTTT
TACGAGTCTGCCATATTGCTCTCAAAAGCTATAGATATCCGGCCCATGAGTTTATTGGCT
GTGGGACAGTTGGGAAATACTTACCTTCTTCATGGAGAACTTAAGTTAAGGATCAGCCGT
GATTTGAGAGCTTTACTAACTGATGCTGTATCATTGAATAAACGGGCTAAAATACGTGAT
GCGCTAGATGATACGGTTCCAAGGGAAGACAAAATTACATCTTATCTTGTAAATGTATGT
GAAGAGTGTGAAGAACTACTTGTTAAGGCAGGAAGACAGTATAGGTTTGCCTTGTCGATA
GATGGGAATGATATGAGAGCCTTGTATAATTGGGGGATTGCTCTCTCGTTGCGTGGGCAG
TTGATTGCAGACATTGGACCTGGTGCTGCACGTGATGCTGACAAAGTTTTCTTGGCTGCA
ATTGATAAGTTCGATGCAATGATCTCCAGAGGAAATGTATATGCACCTGATGCTCTTTTC
AGATGGGCCACAGCATTGCAGCACAGATCTCGCCTACGGCCTAGAACAAGTAGAGAGAAG
GTGAAGTTATTGCAGCAGGCTCAAAGGCTATACAAAGATGCCCTTCATATGGACTCCGAT
AACCTTCAAGCACAAAAGGCCTTGTCATCCTGTATATCTGAGCTCAAGTACTGGTATAGA
TAG