Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057788
CDS Infomation

pacid=37428259 polypeptide=PGSC0003DMP400038902 locus=PGSC0003DMG400022434 ID=PGSC0003DMT400057788.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGAGTTAACTGATTTGCTCTTGGAGGCTGCTGGTAGAACGAATACTGGTGGA
AGGAATCGTCCACCTCAATCATCTAGAAGACATCACAAGAGTTCATATTCTGATGATGGA
AGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCT
GGTTCACAAGTTCCTCTTAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGC
AGTCATGGAGAAGGTAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATT
GGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTG
GAAAGAGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCACGAC
AAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGTTCACCTCCTTCACATTCTCGT
GGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAAT
GAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCTGAGGGTCAATTCAAGCTGAGG
GATGCAGCTAGAAAAGGTTCTGGAGGCAGGGGTTACTCACCTATCAAACGTAGAAGTTTT
ACAGCTGCAACCCTAGGTAGTAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAA
GGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAG
TCACAGTTGCCAACGTTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCA
AAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTCGTAAGAGTTGGC
ATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATTCT
TCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTT
GTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGGTTTCAGACTCTCCT
CCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATG
CCTAGTAAACAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTT
TACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCA
CTTAATGTTGCTGCTGAGAAGGATCGTTTGAGGAGGGATATGGAAGTGGCCAAAATGAAG
AATGATGAAGCAGAGGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGACGATAGCAGG
AAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTAGCTGAGATGAACCGGAAGAATAGG
GTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGT
CAGGCTGGGTATGACCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAA
GGTGCTAATGAAGAAGCAGAAGGTGCATCCAATGGTGAAGTTGCTGCTGCTGCAGCATTG
GCAGCTGAAGATAACAATGGGGCTAGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCA
GCAGCCTTGCAGGCTGCAGCAGGCGCTGGGAAGTTGGTGGACACAAATGCTCCAGTAGAT
CAAGGAACAGAATCAAATACGCTACATGATTTCGATCTGCCTATCTCGTTGGCTGTACTT
CAGAAGTTTGGAGGGTCTCAAGGAGGCCAAGCAGGATTCATGGCTCGCAAACAGAGGATA
GAAGCAACTGTTGGATGTAGCGTTCCTGAGAACGATGGGAGAAGACATGCACTAACTTTA
AGTGTTAGTGACTACAAGAGAAGGAGAGGACTCCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038902
PEP Infomation

pacid=37428259 transcript=PGSC0003DMT400057788 locus=PGSC0003DMG400022434 ID=PGSC0003DMT400057788.v4.03 annot-version=v4.03
Sequence

MEEELTDLLLEAAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS
GSQVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTEL
EREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALN
EIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNE
GDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVG
IGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSP
PLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRP
LNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNR
VENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASNGEVAAAAAL
AAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVL
QKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057788
Transcript Infomation

pacid=37428259 locus=PGSC0003DMG400022434 ID=PGSC0003DMT400057788.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGAGTTAACTGATTTGCTCTTGGAGGCTGCTGGTAGAACGAATACTGGTGGA
AGGAATCGTCCACCTCAATCATCTAGAAGACATCACAAGAGTTCATATTCTGATGATGGA
AGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCT
GGTTCACAAGTTCCTCTTAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGC
AGTCATGGAGAAGGTAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATT
GGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTG
GAAAGAGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCACGAC
AAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGTTCACCTCCTTCACATTCTCGT
GGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAAT
GAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCTGAGGGTCAATTCAAGCTGAGG
GATGCAGCTAGAAAAGGTTCTGGAGGCAGGGGTTACTCACCTATCAAACGTAGAAGTTTT
ACAGCTGCAACCCTAGGTAGTAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAA
GGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAG
TCACAGTTGCCAACGTTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCA
AAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTCGTAAGAGTTGGC
ATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATTCT
TCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTT
GTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGGTTTCAGACTCTCCT
CCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATG
CCTAGTAAACAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTT
TACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCA
CTTAATGTTGCTGCTGAGAAGGATCGTTTGAGGAGGGATATGGAAGTGGCCAAAATGAAG
AATGATGAAGCAGAGGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGACGATAGCAGG
AAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTAGCTGAGATGAACCGGAAGAATAGG
GTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGT
CAGGCTGGGTATGACCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAA
GGTGCTAATGAAGAAGCAGAAGGTGCATCCAATGGTGAAGTTGCTGCTGCTGCAGCATTG
GCAGCTGAAGATAACAATGGGGCTAGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCA
GCAGCCTTGCAGGCTGCAGCAGGCGCTGGGAAGTTGGTGGACACAAATGCTCCAGTAGAT
CAAGGAACAGAATCAAATACGCTACATGATTTCGATCTGCCTATCTCGTTGGCTGTACTT
CAGAAGTTTGGAGGGTCTCAAGGAGGCCAAGCAGGATTCATGGCTCGCAAACAGAGGATA
GAAGCAACTGTTGGATGTAGCGTTCCTGAGAACGATGGGAGAAGACATGCACTAACTTTA
AGTGTTAGTGACTACAAGAGAAGGAGAGGACTCCTTTGA