Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057783
CDS Infomation

pacid=37424280 polypeptide=PGSC0003DMP400038897 locus=PGSC0003DMG400022432 ID=PGSC0003DMT400057783.v4.03 annot-version=v4.03
Sequence

ATGCCGGTTGAAGTAGCAACCGGAGGAACAGAAGCCATTGGTAATCCAAAAGGCGATTTG
AGACCTCAAAACCCTAACGCCGCCTCTAAGAAGTCGAAGGAAAGCGACCGACGTCGTAGG
CGGAGGAAGCAGAAGAAGAACAAGGCGGCGTCTAAGGTTGCAAATGGAGAAGACAGTGAT
AACGGTGCGCAAGACGCAAACGGCGGCGCTGAAGATAGTTCTAAGGAAAATTCTGATCCT
CAGAAGTCTTTGGTTCAAGTTGAAGTAGAGTATGTACCAGAGAAGGCCGAATTAGATGGT
GAGTTCGATGAGGAATTCAGGAAGGTTTTTGAGAAATTCACTTTCACGGATGCCACTGGT
GCTGAGGAGAATGATAAGAAGGATGAAACTGCTGCTGATGGAGCCTTAAAGAAAAAGGCG
GATTCTGATTCTGAGGAGGAAGAAGAGGATGCACAGCAAAAGGAGAAGGGAGTCTCTAAC
AAAAAGAAAAAACTTCAGCGTAGGATGAAAATTGCAGAACTGAAACAAATCTCTATGAAG
CCTGATGTTGTTGAGGTATGGGATGCCACTGCAGCAGACCCTAAGCTCCTGGTATTTCTG
AAATCTTATCGGAATACTGTTCCTGTTCCAAGACACTGGTGTCAGAAACGGAAATTTTTG
CAGGGGAAGCGTGGGATTGAGAAACAGCCATTTCAACTTCCTGACTTTATAGCTGCAACA
GGAATTGAGAAAATTAGACAAGCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAA
AAGCAGCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATTGATTATCAGGTTCTT
CATGACGCCTTTTTTAAGTATCAAACTAAACCAAAGTTGACATCCCTTGGTGATCTGTAT
TATGAAGGGAAGGAGTTTGAGGTCAAGTTGAGGGAAATGAAACCTGGAACTTTGTCTCAT
GAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTGCTCCTCCTCCATGGCTCATCAATATG
CAGAGATATGGTCCTCCACCCTCTTATCCTCAGCTGAAGATCCCTGGACTGAATGCTCCT
ATTCCACCTGGAGCCAAGTTCGGTTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGAT
GAATATGGGCGCCCTTTATACGGAGATGTCTTTGGTGTATTGCAACAAGATCAGCCTAAT
TATGAGGATGAACCTGTTGATAAGACTAAACATTGGGGTGACTTGGAGGAAGAGGAAGAA
GAGGAGGAAGAGGAGGAGGAAGAAGAGATGGAGGAAGAGGAGATGGAGGATGGTATTCAG
TCAGTGGACAGTCTTTCAAGTACTCCTACTGGAGTTGAGACTCCTGATGTTATTGACCTT
CGCAAGCAACAGAGGAAGGAGCCTGAGAAGCCCCTCTACCAGGTGCTTGAAGAAAAAGAA
GAAAAGATAGCTCCTGGTACTCTTCTTGGAACAAGCCATACGTATGTGATCAACACTGGC
GCTCAAGACAAGGCTGGTGCCAAAAGGGTTGATCTGCTCAAAGGTCAGAAGTCAGATAGA
GTTGATGTCACATTGGCACCTGAAGAGTTGGAACTTATGGACAATGTTTTACCAGCCAAA
TACGAGGAAGCTAGAGAGGAAGAGAAGCTCCGTAGCCAGCGTGAGGATTTCAGTGACATG
GTAGCAGAGAATGAGAAGAAGAGGAAGCGTAAAATGCATGAAAAGGATGGCAAGTCGAAG
AAGAAGGATTTCAAGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038897
PEP Infomation

pacid=37424280 transcript=PGSC0003DMT400057783 locus=PGSC0003DMG400022432 ID=PGSC0003DMT400057783.v4.03 annot-version=v4.03
Sequence

MPVEVATGGTEAIGNPKGDLRPQNPNAASKKSKESDRRRRRRKQKKNKAASKVANGEDSD
NGAQDANGGAEDSSKENSDPQKSLVQVEVEYVPEKAELDGEFDEEFRKVFEKFTFTDATG
AEENDKKDETAADGALKKKADSDSEEEEEDAQQKEKGVSNKKKKLQRRMKIAELKQISMK
PDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAAT
GIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLY
YEGKEFEVKLREMKPGTLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAP
IPPGAKFGYQPGGWGKPPVDEYGRPLYGDVFGVLQQDQPNYEDEPVDKTKHWGDLEEEEE
EEEEEEEEEMEEEEMEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKE
EKIAPGTLLGTSHTYVINTGAQDKAGAKRVDLLKGQKSDRVDVTLAPEELELMDNVLPAK
YEEAREEEKLRSQREDFSDMVAENEKKRKRKMHEKDGKSKKKDFKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400057783
Transcript Infomation

pacid=37424280 locus=PGSC0003DMG400022432 ID=PGSC0003DMT400057783.v4.03 annot-version=v4.03
Sequence

ATGCCGGTTGAAGTAGCAACCGGAGGAACAGAAGCCATTGGTAATCCAAAAGGCGATTTG
AGACCTCAAAACCCTAACGCCGCCTCTAAGAAGTCGAAGGAAAGCGACCGACGTCGTAGG
CGGAGGAAGCAGAAGAAGAACAAGGCGGCGTCTAAGGTTGCAAATGGAGAAGACAGTGAT
AACGGTGCGCAAGACGCAAACGGCGGCGCTGAAGATAGTTCTAAGGAAAATTCTGATCCT
CAGAAGTCTTTGGTTCAAGTTGAAGTAGAGTATGTACCAGAGAAGGCCGAATTAGATGGT
GAGTTCGATGAGGAATTCAGGAAGGTTTTTGAGAAATTCACTTTCACGGATGCCACTGGT
GCTGAGGAGAATGATAAGAAGGATGAAACTGCTGCTGATGGAGCCTTAAAGAAAAAGGCG
GATTCTGATTCTGAGGAGGAAGAAGAGGATGCACAGCAAAAGGAGAAGGGAGTCTCTAAC
AAAAAGAAAAAACTTCAGCGTAGGATGAAAATTGCAGAACTGAAACAAATCTCTATGAAG
CCTGATGTTGTTGAGGTATGGGATGCCACTGCAGCAGACCCTAAGCTCCTGGTATTTCTG
AAATCTTATCGGAATACTGTTCCTGTTCCAAGACACTGGTGTCAGAAACGGAAATTTTTG
CAGGGGAAGCGTGGGATTGAGAAACAGCCATTTCAACTTCCTGACTTTATAGCTGCAACA
GGAATTGAGAAAATTAGACAAGCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAA
AAGCAGCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATTGATTATCAGGTTCTT
CATGACGCCTTTTTTAAGTATCAAACTAAACCAAAGTTGACATCCCTTGGTGATCTGTAT
TATGAAGGGAAGGAGTTTGAGGTCAAGTTGAGGGAAATGAAACCTGGAACTTTGTCTCAT
GAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTGCTCCTCCTCCATGGCTCATCAATATG
CAGAGATATGGTCCTCCACCCTCTTATCCTCAGCTGAAGATCCCTGGACTGAATGCTCCT
ATTCCACCTGGAGCCAAGTTCGGTTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGAT
GAATATGGGCGCCCTTTATACGGAGATGTCTTTGGTGTATTGCAACAAGATCAGCCTAAT
TATGAGGATGAACCTGTTGATAAGACTAAACATTGGGGTGACTTGGAGGAAGAGGAAGAA
GAGGAGGAAGAGGAGGAGGAAGAAGAGATGGAGGAAGAGGAGATGGAGGATGGTATTCAG
TCAGTGGACAGTCTTTCAAGTACTCCTACTGGAGTTGAGACTCCTGATGTTATTGACCTT
CGCAAGCAACAGAGGAAGGAGCCTGAGAAGCCCCTCTACCAGGTGCTTGAAGAAAAAGAA
GAAAAGATAGCTCCTGGTACTCTTCTTGGAACAAGCCATACGTATGTGATCAACACTGGC
GCTCAAGACAAGGCTGGTGCCAAAAGGGTTGATCTGCTCAAAGGTCAGAAGTCAGATAGA
GTTGATGTCACATTGGCACCTGAAGAGTTGGAACTTATGGACAATGTTTTACCAGCCAAA
TACGAGGAAGCTAGAGAGGAAGAGAAGCTCCGTAGCCAGCGTGAGGATTTCAGTGACATG
GTAGCAGAGAATGAGAAGAAGAGGAAGCGTAAAATGCATGAAAAGGATGGCAAGTCGAAG
AAGAAGGATTTCAAGTTTTGA