Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057728
CDS Infomation

pacid=37426230 polypeptide=PGSC0003DMP400038857 locus=PGSC0003DMG401022411 ID=PGSC0003DMT400057728.v4.03 annot-version=v4.03
Sequence

ATGTCTGAATCTTCACATGGACGAGAAAATGATGATGATTCTCCACATTATTCTCCTTTT
TACTGTTCTAATCCTTCTGATCAATCCGATGAAGAACCCCTTTGTTGGAAAATCCGTAAA
ATCGAAAGACCAGATCAACTTAGCGCCTTGACGGATCCTTTGGTACTTCTCATCCTCTCT
TACTTGCGGATGAAAGAAGTTAGGCGAACTGCAATTCTCTCAAAAAGATGGCGCCTTTTA
TGGACTTCAGCACATAATCTGGTTTTCAGGTGCACTGGAAAATCTCATTACTCTGTAACT
GCATTCATAACTTCGGTTGATGATACATTGCTTCTATCTAAGCCTAGTAAGTTGAACAAG
TTTTCGGTTGAATTTCATTACGATAAAAAACTTGTTAAGTGTGTTAATAAATGGATGATA
TTTGTACACAATAAATATGTTGAAGAACTGGAGTTGTATCTGATGACAAGGGGTTCAGAC
AATTTTTACAATTTACCGCGGATTTTGTACTCCAATGCGTGTTTTCGAGAAATGAGTTTG
TGCAATTGTAATCTTGTACCAAAGGAGGGGATCAATTGGCCTTCTCTTAAGGTTTTGGTT
ATTAGGTATACTGAGTTGAACAGTCTTATCATTGACGCGTTATGTTCTGGATGTCCTTCT
TTGGAGTCTCTCAAGTTTAGTATGTGTTATGGGGTTAATTTATTTAAAATTAACTCCGAA
AGTGTGAAGAAGTTGGTGATCAGTGGATATTGGCAACAAGTACATGACGAACTTGATGAT
GACGATGATACAGAACTAATAATAGATGCTAGGAATGTTACTTCGCTGGAGATTGAAGGA
TGTTTTCATAAAAAAGTTGTTGTTCTTCAGAATGTATCAGCTCTAGTCCATGCTAAGCTA
GATTTCTATAGGAAGACAGATAATTATGAAAGTGATCAAAGTGATTTCAAGATTGACGAG
GATATGTTAAGAGATCTCCTAGAATTACTCGGGGATGTTGAGAAACTCTCAATTGGGTCA
TGGTGTCTGCAGGTCCTTAATATGATAGAGACTAAAAACTCGGCATGCCCGAGGATGAGA
TGCAAAGACTTGACCTTGAACTCTCGTTTGACTGACAAGGAGCTTCCGGGGTTAGCAATC
CTTCTACAAAGTTGTCCTCTAGTTGAGGTCTTGAACATAAGCGAGGAATCCCCTTTCGAA
GAGTATAGTGTTGGTTGGTCATTCTCGTGGCCCACTTACGAATTTTCTGCAAAAAAATAC
TGGATATCAAGACCTTGTTGGGTGCTGAATCTCAAGACTTTAAGGATTGACGGCTCCTGG
ATATATGAGAGTCTGTATTTTGAGTACCTCTCTACGTTTCTGCAAGCTGTTCTAAAGAAT
GGGTTAGTGCTTCAGAAAGTTATCCTTCCCTCCTTCACTGACAGAACATGGATTCCCCCC
AGGCACCATACCAGAGTTGCAGAAACGTTGCTAAGCTTGCCGAGGTCTTCAAAGGATGCT
GTTATTTTGTTCTCTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038857
PEP Infomation

pacid=37426230 transcript=PGSC0003DMT400057728 locus=PGSC0003DMG401022411 ID=PGSC0003DMT400057728.v4.03 annot-version=v4.03
Sequence

MSESSHGRENDDDSPHYSPFYCSNPSDQSDEEPLCWKIRKIERPDQLSALTDPLVLLILS
YLRMKEVRRTAILSKRWRLLWTSAHNLVFRCTGKSHYSVTAFITSVDDTLLLSKPSKLNK
FSVEFHYDKKLVKCVNKWMIFVHNKYVEELELYLMTRGSDNFYNLPRILYSNACFREMSL
CNCNLVPKEGINWPSLKVLVIRYTELNSLIIDALCSGCPSLESLKFSMCYGVNLFKINSE
SVKKLVISGYWQQVHDELDDDDDTELIIDARNVTSLEIEGCFHKKVVVLQNVSALVHAKL
DFYRKTDNYESDQSDFKIDEDMLRDLLELLGDVEKLSIGSWCLQVLNMIETKNSACPRMR
CKDLTLNSRLTDKELPGLAILLQSCPLVEVLNISEESPFEEYSVGWSFSWPTYEFSAKKY
WISRPCWVLNLKTLRIDGSWIYESLYFEYLSTFLQAVLKNGLVLQKVILPSFTDRTWIPP
RHHTRVAETLLSLPRSSKDAVILFSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400057728
Transcript Infomation

pacid=37426230 locus=PGSC0003DMG401022411 ID=PGSC0003DMT400057728.v4.03 annot-version=v4.03
Sequence

ATGTCTGAATCTTCACATGGACGAGAAAATGATGATGATTCTCCACATTATTCTCCTTTT
TACTGTTCTAATCCTTCTGATCAATCCGATGAAGAACCCCTTTGTTGGAAAATCCGTAAA
ATCGAAAGACCAGATCAACTTAGCGCCTTGACGGATCCTTTGGTACTTCTCATCCTCTCT
TACTTGCGGATGAAAGAAGTTAGGCGAACTGCAATTCTCTCAAAAAGATGGCGCCTTTTA
TGGACTTCAGCACATAATCTGGTTTTCAGGTGCACTGGAAAATCTCATTACTCTGTAACT
GCATTCATAACTTCGGTTGATGATACATTGCTTCTATCTAAGCCTAGTAAGTTGAACAAG
TTTTCGGTTGAATTTCATTACGATAAAAAACTTGTTAAGTGTGTTAATAAATGGATGATA
TTTGTACACAATAAATATGTTGAAGAACTGGAGTTGTATCTGATGACAAGGGGTTCAGAC
AATTTTTACAATTTACCGCGGATTTTGTACTCCAATGCGTGTTTTCGAGAAATGAGTTTG
TGCAATTGTAATCTTGTACCAAAGGAGGGGATCAATTGGCCTTCTCTTAAGGTTTTGGTT
ATTAGGTATACTGAGTTGAACAGTCTTATCATTGACGCGTTATGTTCTGGATGTCCTTCT
TTGGAGTCTCTCAAGTTTAGTATGTGTTATGGGGTTAATTTATTTAAAATTAACTCCGAA
AGTGTGAAGAAGTTGGTGATCAGTGGATATTGGCAACAAGTACATGACGAACTTGATGAT
GACGATGATACAGAACTAATAATAGATGCTAGGAATGTTACTTCGCTGGAGATTGAAGGA
TGTTTTCATAAAAAAGTTGTTGTTCTTCAGAATGTATCAGCTCTAGTCCATGCTAAGCTA
GATTTCTATAGGAAGACAGATAATTATGAAAGTGATCAAAGTGATTTCAAGATTGACGAG
GATATGTTAAGAGATCTCCTAGAATTACTCGGGGATGTTGAGAAACTCTCAATTGGGTCA
TGGTGTCTGCAGGTCCTTAATATGATAGAGACTAAAAACTCGGCATGCCCGAGGATGAGA
TGCAAAGACTTGACCTTGAACTCTCGTTTGACTGACAAGGAGCTTCCGGGGTTAGCAATC
CTTCTACAAAGTTGTCCTCTAGTTGAGGTCTTGAACATAAGCGAGGAATCCCCTTTCGAA
GAGTATAGTGTTGGTTGGTCATTCTCGTGGCCCACTTACGAATTTTCTGCAAAAAAATAC
TGGATATCAAGACCTTGTTGGGTGCTGAATCTCAAGACTTTAAGGATTGACGGCTCCTGG
ATATATGAGAGTCTGTATTTTGAGTACCTCTCTACGTTTCTGCAAGCTGTTCTAAAGAAT
GGGTTAGTGCTTCAGAAAGTTATCCTTCCCTCCTTCACTGACAGAACATGGATTCCCCCC
AGGCACCATACCAGAGTTGCAGAAACGTTGCTAAGCTTGCCGAGGTCTTCAAAGGATGCT
GTTATTTTGTTCTCTGGTTGA