Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057725
CDS Infomation

pacid=37424814 polypeptide=PGSC0003DMP400038854 locus=PGSC0003DMG400022410 ID=PGSC0003DMT400057725.v4.03 annot-version=v4.03
Sequence

ATGGGAGTAGCTTCAGACCGATTATCTTCCTTGCCGGATTCAGTTCTGCTTCACATACTC
TCCTTTCTTCCCTTCGACGACGTCGTTCGGACCACCCGTCTCTGCCACCAATGGAGAACT
CTCTGGTCCTTCTCTTCCACCCTCAATTTCATTCACCATTCCAAAGACCTCTTTTCTGTA
CGAAAGTTCGTTTCATTTGTTGACAAATCCCTCATAAACTTGCACGGTAACTGCAACAGT
CTATTAAAGCTTCACGTTGAGTTCCCCTTTAAACGTTGCTTTACATCCGATGTTACTGTT
TGGGTTCTTTTTGCCATCACCCATCAAGTCAAAGAACTCAATTTGGTTCTCTCCAATGAT
GATGGTGATTGTTATAATCTCCCTAAGAGATTATTGTTCAACTCATTTCTTGAAAAAGCG
AACTGGGTTTCTTGTAGATTTTACAAAGTTCAAGCTGTCAGATGGGATTCTTTAAGGGAA
TTGAGAATTGGGTCGACGGAATTTGATGATGATATAGTCAGGAAAATTGTTGCTGGTAGT
CCGTGTTTGGATTTGTTGGAGTTGGATAATTGTTGGGGTTTTAGGTGTTTGGATTTGTTT
GGTGGAAAGGTGAGTAAGTTGGTGGTGAATGGGTATAAGGAAGTGAAGAAGTTCTTGGAT
CTTGAACTGGAAATTAAAGCACCTTGTGTTAAGGTATTGGAATTAAAGGGGTGTATTAGA
ATGAATATTAAGTTGAAGAATCTGAGGAACTGTGTCTCTGTGAAATTTGATTTTCACTCA
AAGAACCCTAAGGATGAGGAGTGTGACAACTTTTATGAACAGCAAGGAGATATGTTGATG
GCCATGTTTGGGAGTTTCAGTCATGTCAAAGATGTTATGTTAGGGACATGGTGCATTGAG
GTTATGGCATTTTGGGACTCGCCATGGGTGCTGTTTACCATGATCAGCTGTGAGTGTTTA
ACACTGCATACTCCCATACAGAAGCGATATCTTCCTGGCATTATACGCTTATTAAAAAAT
TTACTCAAGCTTCAGACGCTAATCATACATATGGCCCTACCCTATTTTGAGTTTGAGGCT
TGCCTTATTCCAGTTGTAAATGATGTTTACTCTGTTGAAGGAAAGCTTCAACTGTCTCTG
CTTCCTCGAGGTTGTGGTCATCAACTTGAAAAGATCAGAGTTTGTGGCTTTGAAGGAACG
CAATCTGGCCTAGAAGTTTTATTTCTGCGCGATCTTCTTTTGATATCTGCTAACATTGAG
ATGATGGTTATTGAATGGAGATCTGGACTTCAGAACTTGATTCGTGATGCATCAGTTGAG
TTTGTGGCTAAAACTTTATCAAACGTTTGTAAACGCTCAAAGAAAGCTGTGGTTTTGTTC
AAAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038854
PEP Infomation

pacid=37424814 transcript=PGSC0003DMT400057725 locus=PGSC0003DMG400022410 ID=PGSC0003DMT400057725.v4.03 annot-version=v4.03
Sequence

MGVASDRLSSLPDSVLLHILSFLPFDDVVRTTRLCHQWRTLWSFSSTLNFIHHSKDLFSV
RKFVSFVDKSLINLHGNCNSLLKLHVEFPFKRCFTSDVTVWVLFAITHQVKELNLVLSND
DGDCYNLPKRLLFNSFLEKANWVSCRFYKVQAVRWDSLRELRIGSTEFDDDIVRKIVAGS
PCLDLLELDNCWGFRCLDLFGGKVSKLVVNGYKEVKKFLDLELEIKAPCVKVLELKGCIR
MNIKLKNLRNCVSVKFDFHSKNPKDEECDNFYEQQGDMLMAMFGSFSHVKDVMLGTWCIE
VMAFWDSPWVLFTMISCECLTLHTPIQKRYLPGIIRLLKNLLKLQTLIIHMALPYFEFEA
CLIPVVNDVYSVEGKLQLSLLPRGCGHQLEKIRVCGFEGTQSGLEVLFLRDLLLISANIE
MMVIEWRSGLQNLIRDASVEFVAKTLSNVCKRSKKAVVLFKM*

Transcript Sequence

Transcript ID

PGSC0003DMT400057725
Transcript Infomation

pacid=37424814 locus=PGSC0003DMG400022410 ID=PGSC0003DMT400057725.v4.03 annot-version=v4.03
Sequence

ATGGGAGTAGCTTCAGACCGATTATCTTCCTTGCCGGATTCAGTTCTGCTTCACATACTC
TCCTTTCTTCCCTTCGACGACGTCGTTCGGACCACCCGTCTCTGCCACCAATGGAGAACT
CTCTGGTCCTTCTCTTCCACCCTCAATTTCATTCACCATTCCAAAGACCTCTTTTCTGTA
CGAAAGTTCGTTTCATTTGTTGACAAATCCCTCATAAACTTGCACGGTAACTGCAACAGT
CTATTAAAGCTTCACGTTGAGTTCCCCTTTAAACGTTGCTTTACATCCGATGTTACTGTT
TGGGTTCTTTTTGCCATCACCCATCAAGTCAAAGAACTCAATTTGGTTCTCTCCAATGAT
GATGGTGATTGTTATAATCTCCCTAAGAGATTATTGTTCAACTCATTTCTTGAAAAAGCG
AACTGGGTTTCTTGTAGATTTTACAAAGTTCAAGCTGTCAGATGGGATTCTTTAAGGGAA
TTGAGAATTGGGTCGACGGAATTTGATGATGATATAGTCAGGAAAATTGTTGCTGGTAGT
CCGTGTTTGGATTTGTTGGAGTTGGATAATTGTTGGGGTTTTAGGTGTTTGGATTTGTTT
GGTGGAAAGGTGAGTAAGTTGGTGGTGAATGGGTATAAGGAAGTGAAGAAGTTCTTGGAT
CTTGAACTGGAAATTAAAGCACCTTGTGTTAAGGTATTGGAATTAAAGGGGTGTATTAGA
ATGAATATTAAGTTGAAGAATCTGAGGAACTGTGTCTCTGTGAAATTTGATTTTCACTCA
AAGAACCCTAAGGATGAGGAGTGTGACAACTTTTATGAACAGCAAGGAGATATGTTGATG
GCCATGTTTGGGAGTTTCAGTCATGTCAAAGATGTTATGTTAGGGACATGGTGCATTGAG
GTTATGGCATTTTGGGACTCGCCATGGGTGCTGTTTACCATGATCAGCTGTGAGTGTTTA
ACACTGCATACTCCCATACAGAAGCGATATCTTCCTGGCATTATACGCTTATTAAAAAAT
TTACTCAAGCTTCAGACGCTAATCATACATATGGCCCTACCCTATTTTGAGTTTGAGGCT
TGCCTTATTCCAGTTGTAAATGATGTTTACTCTGTTGAAGGAAAGCTTCAACTGTCTCTG
CTTCCTCGAGGTTGTGGTCATCAACTTGAAAAGATCAGAGTTTGTGGCTTTGAAGGAACG
CAATCTGGCCTAGAAGTTTTATTTCTGCGCGATCTTCTTTTGATATCTGCTAACATTGAG
ATGATGGTTATTGAATGGAGATCTGGACTTCAGAACTTGATTCGTGATGCATCAGTTGAG
TTTGTGGCTAAAACTTTATCAAACGTTTGTAAACGCTCAAAGAAAGCTGTGGTTTTGTTC
AAAATGTAA