Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057712
CDS Infomation

pacid=37428312 polypeptide=PGSC0003DMP400038843 locus=PGSC0003DMG400022405 ID=PGSC0003DMT400057712.v4.03 annot-version=v4.03
Sequence

ATGCAGAGAGTAACGGTGATTGAAAGATTTTCTAAAACTTTCCGTGATAATCCTTCCTTT
TCTAAGCTGCTCATTGTTTTCACTGTCAGTGGTGGAGGTCTTGTGGCATACTCTGAGGCA
GGAAAATCGAATGACAATTCAAATGCTGGAGAATTGGTTGAGGCCAACAACAGAAAAAAG
AAAGTTGTTGTCCTTGGAACTGGTTGGGCTGGAACCAGTTTCTTGAAGAATCTGAAGGAT
CCTTCATATGATGTCCAAGTGATATCTCCAAGAAATTACTTTGCATTCACCCCTTTGCTT
CCAAGTGTTACATGTGGCACAGTGGAAAGTCGCAGTGTTGTTGAACCAATTCGCAACATT
ATCAGAAAGAGATATGCAGAGGCCTATTACTGGGAAGCTGAATGTATCAAAATTGATCCA
GAAAACAAGAAGGTATATTGTCGATCAAATCTAAGCACCAACGGGAATGGGAAGGAAGAG
TTTGCTGTAGATTATGACTATCTTGTCATTGCCACTGGAGCCCGAGTAAATACATTCAAC
ATTCCTGGTGTTGAAGAGAACACTTTCTTTTTGAAGGAAGTAGAAGATGCTCAAAAGATC
CGTAGAACTGTTATTGACTGTTTTGAGAAAGCAAGTCTGCCTACCCTCAGTGACGAGGAG
AGAAAGAGGCTTCTTCACTTTGTTATTGTTGGTGGTGGACCAACTGGTGTGGAGTTTGCG
GCGCAGCTTCATGACTTTGTCAATGAAGATATAGTTAGGCTGTACCCTAAGGTCAAAGAT
CTGGTGAAGATAACACTTCTTGAGGCAACAGATCATATTTTGAACATGTTTGACAAAAGA
ATTACTGCTTTTGCTGAAGAAAAATTCCACAGAGATGGTATTGATGTGAAAACAGGGTCA
ATGGTTGTGAAGGTAGGAGAAAAAGAAATTTCTACTAAGGATGTTAAGCGTGGAGAAATA
ACTTCTATGCCTTACGGAATGGCTGTCTGGTCTACTGGTATTGGAACTCGTCCAGTAATT
ATGGAGTTTATGAAGCACATTGGTCAGGGAAACAGACGAGTGTTAGCAACTGATGAGTGG
CTGCGTGTCGAGGGACAGGAGAACGTATATGCACTTGGTGACTGTGCAACAATCAACCAG
CGCAAAGTCATGGAAGATATTGCTGCCATATTTCAAAAGGCAGACAAAGATAACTCTGGA
ACACTTACAGTCAAAGAATTTCAGGAAGTCCTTAATGACATATGTGAAAGATACCCGCAG
GTGGAGCTTTACTTGAAAAATAAAAAAATGAGTAATCTTGTCGATCTCTTGAAAGAATCA
AAAGGCAATGGTGTTAAAGAATCAATTGAGGTGGACATTGAAGAATTTAAATCTGCTCTG
TCCCAAGTGGATACTGATATGAAGAATCTTCCAGCAACAGCTCAGGTTGCATCTCAGCAA
GGTGTCTACTTAGCTAAATGCTTTAATCGTATGGAGGAATGTGAAAAAAATCCGGAAGGT
CCTCTTCGGTTTAGAGGAGAAGGCCGCCATCGCTTTCACCCATTCAGGTACCGACATTTG
GGACAGTTTGCACCTTTGGGAGGAGAGCAAACAGCAGCACAACTTCCAGGAGATTGGGTT
TCAATTGGTCATAGCAGTCAGTGGCTCTGGTATTCTGTGTATGCTAGCAAACAAGTCAGT
TGGCGTACAAGGGCATTGGTTGTCTCTGACTGGGTAAGACGGTTCATATTTGGAAGAGAC
TCAAGCCAGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038843
PEP Infomation

pacid=37428312 transcript=PGSC0003DMT400057712 locus=PGSC0003DMG400022405 ID=PGSC0003DMT400057712.v4.03 annot-version=v4.03
Sequence

MQRVTVIERFSKTFRDNPSFSKLLIVFTVSGGGLVAYSEAGKSNDNSNAGELVEANNRKK
KVVVLGTGWAGTSFLKNLKDPSYDVQVISPRNYFAFTPLLPSVTCGTVESRSVVEPIRNI
IRKRYAEAYYWEAECIKIDPENKKVYCRSNLSTNGNGKEEFAVDYDYLVIATGARVNTFN
IPGVEENTFFLKEVEDAQKIRRTVIDCFEKASLPTLSDEERKRLLHFVIVGGGPTGVEFA
AQLHDFVNEDIVRLYPKVKDLVKITLLEATDHILNMFDKRITAFAEEKFHRDGIDVKTGS
MVVKVGEKEISTKDVKRGEITSMPYGMAVWSTGIGTRPVIMEFMKHIGQGNRRVLATDEW
LRVEGQENVYALGDCATINQRKVMEDIAAIFQKADKDNSGTLTVKEFQEVLNDICERYPQ
VELYLKNKKMSNLVDLLKESKGNGVKESIEVDIEEFKSALSQVDTDMKNLPATAQVASQQ
GVYLAKCFNRMEECEKNPEGPLRFRGEGRHRFHPFRYRHLGQFAPLGGEQTAAQLPGDWV
SIGHSSQWLWYSVYASKQVSWRTRALVVSDWVRRFIFGRDSSQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057712
Transcript Infomation

pacid=37428312 locus=PGSC0003DMG400022405 ID=PGSC0003DMT400057712.v4.03 annot-version=v4.03
Sequence

ATGCAGAGAGTAACGGTGATTGAAAGATTTTCTAAAACTTTCCGTGATAATCCTTCCTTT
TCTAAGCTGCTCATTGTTTTCACTGTCAGTGGTGGAGGTCTTGTGGCATACTCTGAGGCA
GGAAAATCGAATGACAATTCAAATGCTGGAGAATTGGTTGAGGCCAACAACAGAAAAAAG
AAAGTTGTTGTCCTTGGAACTGGTTGGGCTGGAACCAGTTTCTTGAAGAATCTGAAGGAT
CCTTCATATGATGTCCAAGTGATATCTCCAAGAAATTACTTTGCATTCACCCCTTTGCTT
CCAAGTGTTACATGTGGCACAGTGGAAAGTCGCAGTGTTGTTGAACCAATTCGCAACATT
ATCAGAAAGAGATATGCAGAGGCCTATTACTGGGAAGCTGAATGTATCAAAATTGATCCA
GAAAACAAGAAGGTATATTGTCGATCAAATCTAAGCACCAACGGGAATGGGAAGGAAGAG
TTTGCTGTAGATTATGACTATCTTGTCATTGCCACTGGAGCCCGAGTAAATACATTCAAC
ATTCCTGGTGTTGAAGAGAACACTTTCTTTTTGAAGGAAGTAGAAGATGCTCAAAAGATC
CGTAGAACTGTTATTGACTGTTTTGAGAAAGCAAGTCTGCCTACCCTCAGTGACGAGGAG
AGAAAGAGGCTTCTTCACTTTGTTATTGTTGGTGGTGGACCAACTGGTGTGGAGTTTGCG
GCGCAGCTTCATGACTTTGTCAATGAAGATATAGTTAGGCTGTACCCTAAGGTCAAAGAT
CTGGTGAAGATAACACTTCTTGAGGCAACAGATCATATTTTGAACATGTTTGACAAAAGA
ATTACTGCTTTTGCTGAAGAAAAATTCCACAGAGATGGTATTGATGTGAAAACAGGGTCA
ATGGTTGTGAAGGTAGGAGAAAAAGAAATTTCTACTAAGGATGTTAAGCGTGGAGAAATA
ACTTCTATGCCTTACGGAATGGCTGTCTGGTCTACTGGTATTGGAACTCGTCCAGTAATT
ATGGAGTTTATGAAGCACATTGGTCAGGGAAACAGACGAGTGTTAGCAACTGATGAGTGG
CTGCGTGTCGAGGGACAGGAGAACGTATATGCACTTGGTGACTGTGCAACAATCAACCAG
CGCAAAGTCATGGAAGATATTGCTGCCATATTTCAAAAGGCAGACAAAGATAACTCTGGA
ACACTTACAGTCAAAGAATTTCAGGAAGTCCTTAATGACATATGTGAAAGATACCCGCAG
GTGGAGCTTTACTTGAAAAATAAAAAAATGAGTAATCTTGTCGATCTCTTGAAAGAATCA
AAAGGCAATGGTGTTAAAGAATCAATTGAGGTGGACATTGAAGAATTTAAATCTGCTCTG
TCCCAAGTGGATACTGATATGAAGAATCTTCCAGCAACAGCTCAGGTTGCATCTCAGCAA
GGTGTCTACTTAGCTAAATGCTTTAATCGTATGGAGGAATGTGAAAAAAATCCGGAAGGT
CCTCTTCGGTTTAGAGGAGAAGGCCGCCATCGCTTTCACCCATTCAGGTACCGACATTTG
GGACAGTTTGCACCTTTGGGAGGAGAGCAAACAGCAGCACAACTTCCAGGAGATTGGGTT
TCAATTGGTCATAGCAGTCAGTGGCTCTGGTATTCTGTGTATGCTAGCAAACAAGTCAGT
TGGCGTACAAGGGCATTGGTTGTCTCTGACTGGGTAAGACGGTTCATATTTGGAAGAGAC
TCAAGCCAGATTTAA