Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057680
CDS Infomation

pacid=37424299 polypeptide=PGSC0003DMP400038815 locus=PGSC0003DMG400022394 ID=PGSC0003DMT400057680.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCCTTCAAATTTTCTCTGTTCTGTTCTTTTCACTCTTTTTGGCAAAATGTTGT
TACTCCAAAGAAGAATATTTTGTCCAGTGTCTTTCTAAATATTCTGAAATAAACATTACA
CAAAACATTTACACCCCAGGCTCCCCAATTTATTCATCTATCCTGGAATATGCCCAAAAA
AATCCCAGATGGTTGAATTCTTCCCATCCCAATTTCATTGCCTCCCCTAAGGAAGAATCA
GAAATCAGGCCTGTCATTCTTTGTAGTAAAAAAACAGGCCTACAAATCAAGATCAAAAGT
GGTGGCCACGACTATGAAGGCATATCTTTTCGCTCTGAATCCCCTTTTGTTATGCTTGAT
TTAGGCAATCTTAACAAAATCAAGATTGATTTAAAGGAAGAAACAATTTGGGTTCAAACA
GGGGCGACCCTTGGCCAGCTTTACTATGCAATTGCCAAGAAAAGTAAAGTTCATGCATTT
CCAGCCGGTGTCTGCTTCAGTGTTGGCACTGGCGGAATCATCAGTGGTGGTGGGCTCGGT
GCATTGATGAGGAAATTCGGCCTGGCAGCTGATAACGTTGTAGATGCACGTGTGATGGAT
GTCAATGGAAAAATTCTTGACAGAAAAATGAATGAAGATTTGTTTTGGGCGATAAGAGGA
GGTGGGGGAGCAAGTTTCGGTGTTATTCTAGCATGGAAACTAAAATTGGTTCGGGTTCCT
GAAAAGGTTACTGTTTTCACGATTCGTAGGGAGTTAGAAGGTAACTTAACTCTCCTCCGA
AAATGGGAAAACATAGCACATCAACTACCTGAAGATTTGTTTGTCAGGGCGTTTGTTCAA
AAAGGCGTATTTTCAGCAGGAAATGATACCAAAAACCATGTGGGATTCTATATCCAGGGG
CAATATATTGGGCCTGTTGACGAATTAATTCCTCTGCTCAATCAATACTTCCCTGAGTTT
AATTTGGAGCGAAAAGATTGCTTCAAAGAGAATATTACTGCTGATGCAGAGAAAGAATGC
TTCGAAGTTCCCTGGATCAGATCAGTGTTGTATTTCTCTTGGAGAAACCCAAATGATTCA
CTTGAAGTTTTGCTAGAAAAGAGTATTCCAACACACAAGGATTATCACAAAGGAACATCT
GATTTCGTGAAGACTCCAATTCCAGAAAGTGGTTGGGAAATGGTAGAAAAATTGTTTCGG
GAAGAAGAAAGACCTCAGATGGTTTTTGAGCCATTCGGTGGGAAAATGTATGAAATTTCT
GAATCTGAAATTCCATTTCCTCATAGAAAAGGGAATTTGTATACTATTCAGTACTTTGTG
AGCTGGGACGATAACAGTGAGAGCATATCAAGCCAGAAAATAGGATGGATAAGGAAATTG
TACAAGGAAATGGAGCCATATGTTGCAAAATCTCCAAGAAGTGCTTATCTGAATTACAGG
GACTTTGGTTTGGGAACAAATGAAGAGGACTACAGCTATTCCAAGGCCAAAATATGGGGT
GAAAAGTATTTCAAAGGCAATTTTGAGAGACTGGCTAAAGTGAAGAGTAAAGTAGATCCC
AAAAATTTCTTTAGAAGTGAACAAAGTGTAACTCCTTATCAGTTATCATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038815
PEP Infomation

pacid=37424299 transcript=PGSC0003DMT400057680 locus=PGSC0003DMG400022394 ID=PGSC0003DMT400057680.v4.03 annot-version=v4.03
Sequence

MGSLQIFSVLFFSLFLAKCCYSKEEYFVQCLSKYSEINITQNIYTPGSPIYSSILEYAQK
NPRWLNSSHPNFIASPKEESEIRPVILCSKKTGLQIKIKSGGHDYEGISFRSESPFVMLD
LGNLNKIKIDLKEETIWVQTGATLGQLYYAIAKKSKVHAFPAGVCFSVGTGGIISGGGLG
ALMRKFGLAADNVVDARVMDVNGKILDRKMNEDLFWAIRGGGGASFGVILAWKLKLVRVP
EKVTVFTIRRELEGNLTLLRKWENIAHQLPEDLFVRAFVQKGVFSAGNDTKNHVGFYIQG
QYIGPVDELIPLLNQYFPEFNLERKDCFKENITADAEKECFEVPWIRSVLYFSWRNPNDS
LEVLLEKSIPTHKDYHKGTSDFVKTPIPESGWEMVEKLFREEERPQMVFEPFGGKMYEIS
ESEIPFPHRKGNLYTIQYFVSWDDNSESISSQKIGWIRKLYKEMEPYVAKSPRSAYLNYR
DFGLGTNEEDYSYSKAKIWGEKYFKGNFERLAKVKSKVDPKNFFRSEQSVTPYQLSY*

Transcript Sequence

Transcript ID

PGSC0003DMT400057680
Transcript Infomation

pacid=37424299 locus=PGSC0003DMG400022394 ID=PGSC0003DMT400057680.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCCTTCAAATTTTCTCTGTTCTGTTCTTTTCACTCTTTTTGGCAAAATGTTGT
TACTCCAAAGAAGAATATTTTGTCCAGTGTCTTTCTAAATATTCTGAAATAAACATTACA
CAAAACATTTACACCCCAGGCTCCCCAATTTATTCATCTATCCTGGAATATGCCCAAAAA
AATCCCAGATGGTTGAATTCTTCCCATCCCAATTTCATTGCCTCCCCTAAGGAAGAATCA
GAAATCAGGCCTGTCATTCTTTGTAGTAAAAAAACAGGCCTACAAATCAAGATCAAAAGT
GGTGGCCACGACTATGAAGGCATATCTTTTCGCTCTGAATCCCCTTTTGTTATGCTTGAT
TTAGGCAATCTTAACAAAATCAAGATTGATTTAAAGGAAGAAACAATTTGGGTTCAAACA
GGGGCGACCCTTGGCCAGCTTTACTATGCAATTGCCAAGAAAAGTAAAGTTCATGCATTT
CCAGCCGGTGTCTGCTTCAGTGTTGGCACTGGCGGAATCATCAGTGGTGGTGGGCTCGGT
GCATTGATGAGGAAATTCGGCCTGGCAGCTGATAACGTTGTAGATGCACGTGTGATGGAT
GTCAATGGAAAAATTCTTGACAGAAAAATGAATGAAGATTTGTTTTGGGCGATAAGAGGA
GGTGGGGGAGCAAGTTTCGGTGTTATTCTAGCATGGAAACTAAAATTGGTTCGGGTTCCT
GAAAAGGTTACTGTTTTCACGATTCGTAGGGAGTTAGAAGGTAACTTAACTCTCCTCCGA
AAATGGGAAAACATAGCACATCAACTACCTGAAGATTTGTTTGTCAGGGCGTTTGTTCAA
AAAGGCGTATTTTCAGCAGGAAATGATACCAAAAACCATGTGGGATTCTATATCCAGGGG
CAATATATTGGGCCTGTTGACGAATTAATTCCTCTGCTCAATCAATACTTCCCTGAGTTT
AATTTGGAGCGAAAAGATTGCTTCAAAGAGAATATTACTGCTGATGCAGAGAAAGAATGC
TTCGAAGTTCCCTGGATCAGATCAGTGTTGTATTTCTCTTGGAGAAACCCAAATGATTCA
CTTGAAGTTTTGCTAGAAAAGAGTATTCCAACACACAAGGATTATCACAAAGGAACATCT
GATTTCGTGAAGACTCCAATTCCAGAAAGTGGTTGGGAAATGGTAGAAAAATTGTTTCGG
GAAGAAGAAAGACCTCAGATGGTTTTTGAGCCATTCGGTGGGAAAATGTATGAAATTTCT
GAATCTGAAATTCCATTTCCTCATAGAAAAGGGAATTTGTATACTATTCAGTACTTTGTG
AGCTGGGACGATAACAGTGAGAGCATATCAAGCCAGAAAATAGGATGGATAAGGAAATTG
TACAAGGAAATGGAGCCATATGTTGCAAAATCTCCAAGAAGTGCTTATCTGAATTACAGG
GACTTTGGTTTGGGAACAAATGAAGAGGACTACAGCTATTCCAAGGCCAAAATATGGGGT
GAAAAGTATTTCAAAGGCAATTTTGAGAGACTGGCTAAAGTGAAGAGTAAAGTAGATCCC
AAAAATTTCTTTAGAAGTGAACAAAGTGTAACTCCTTATCAGTTATCATATTGA