Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057621
CDS Infomation

pacid=37425726 polypeptide=PGSC0003DMP400038778 locus=PGSC0003DMG401022374 ID=PGSC0003DMT400057621.v4.03 annot-version=v4.03
Sequence

ATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGA
TGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAA
CCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATC
ACTATGAGGCCACCTTCAACTCATGCCTATTGGTTCACCAAAGCCACATTCCTAAGATTT
GTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATC
TCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGA
AGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGCAAAATCT
GAAGTTGAAGAAGCTAATATTGCTGCACCTAAAGAAAACTCCAAGATTCACCTCCAGCGC
CACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCA
ACAGTTGCAGGCTTTGAGATTGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTT
GGTGCCTTACGTCTTAGGGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCAC
ACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTA
TCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGGATAGT
TCTGACTCGAAGGAATCAACAAATTCAAATGGTGTCAAAGATGAGAATCTTCCTGCATCA
GATCCATCAGCAAAAGTTCAGATGCAAATGCCATGGCAGAACCAAATTCCTCCGTATATG
TACAACTTTCATGGCCCAGCTCAACAGATGCCTTTTGCTGGCATGCATCCTTTACAATAT
TATCCAGCACATATGCAGTGGCCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGG
GACTCTCACAAACGGTCAAAGAAGAAGGAGAAATCCAAAGAACATGACAGTTCAGAAGAT
GATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGAGGAAGTTAGGAAG
CATGAGAAAAAGCATTCTTCAAGGGAGAATTCACATGCTAAAAAGCACAAGAAGAAATCC
TCAAAAACAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAA
AATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATGAAGATTCT
CTCAAAGAGCAGGTAGATGATGCTGTTGCAATACTGGAGAAACGTCGCAACTCAAAAGGA
CATAGGAACAAGAATAGAGGACATCAGAATCTTGATATAGAGAATGAATCAAATGGTTAT
AGCAACACAGACCTAAATGAGGGCATGTCACCTAAGTTATCTGAGAAAGCAAAAGGAAAT
AAGGCTTGGGATGCATTCCAGAATATTCTGATGAGTCGTGAGGAGGCAAGTATGAATGGA
GCAAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGT
GAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTCTCATGAGCAAAAATCAT
GAAGAAAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCA
AGTTTGAAGAAAGGAGCTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCA
GGAGGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAAT
AGTAATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGGCT
AGGCGAATAATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTC
GAAAGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCATCTTTT
GATGATCATTATGGCTCTCAGTGGAAAACAGACATTGGCATGGACGCAGACTTGGTTGCT
GCAGCAAATGCTGAAAATGGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATCTGGG
ACCAGTCAACCTGATGACCTCTGTGTGGTGCTTGCAAGAGAACCTAGTTTGGATCCTCTT
GAGGCATCTTGGCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGAT
AAAAAATCTCCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAA
GGTAAAAGCACAACTAAGAAGGATGGTCTTGCAAAGACCGGGAAAGATGCAAGGTCTAAA
GTCTCCCCAGGATCTCTGTCAAGGAGCAGAATTGATGCCTTAGCAAAGAGCAAGAAGATG
TCTCCTCCTCCTAACAAGCTGACAACCCAGAAGAGCAAATTAGATCGGGTACGACAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400038778
PEP Infomation

pacid=37425726 transcript=PGSC0003DMT400057621 locus=PGSC0003DMG401022374 ID=PGSC0003DMT400057621.v4.03 annot-version=v4.03
Sequence

MDSKTLLDYALFQLTPTRTRCDLVVFSGGKNEKLASGLVEPFISHLKFAKDQIPKGGYSI
TMRPPSTHAYWFTKATFLRFVRFVSTPEILERFMRLEREISQIESSIQSNECSNGNSEEG
SSPANSESTRKSNDSFKAKSEVEEANIAAPKENSKIHLQRHLDTRKALLRKEQAMAYARA
TVAGFEIDQLDDLIQFANSFGALRLRDACVDFKELYKQKHTDGQWMDEVAAMKACTPMDL
SYLGNQGVILAYDNNGSLDSSDSKESTNSNGVKDENLPASDPSAKVQMQMPWQNQIPPYM
YNFHGPAQQMPFAGMHPLQYYPAHMQWPQNVNGSTNGSVRDSHKRSKKKEKSKEHDSSED
DEQTESSASDSGTDSEEVRKHEKKHSSRENSHAKKHKKKSSKTVVIRNINYITSNRKNEE
NDGSSYDSSSAESHLLDEDSLKEQVDDAVAILEKRRNSKGHRNKNRGHQNLDIENESNGY
SNTDLNEGMSPKLSEKAKGNKAWDAFQNILMSREEASMNGASDQLPLDFQDEGYGIKNSG
EKVRRDHLTPDDSLLMSKNHEENGTKVNMVDFANGEDMRPSLKKGASEDVHLLFSHKEPS
GGNTLGTPSDFGSESSAIRNSNGEDWFVVNHSGSSETQEARRIIFDNDSSMSTQKSSSQV
ESERAAPIDDSFMVQSRPSFDDHYGSQWKTDIGMDADLVAAANAENGDPVASKTKLSTSG
TSQPDDLCVVLAREPSLDPLEASWQPELDFQIEASFIQVDKKSPAVEAKPPPTEETVPVK
GKSTTKKDGLAKTGKDARSKVSPGSLSRSRIDALAKSKKMSPPPNKLTTQKSKLDRVRQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400057621
Transcript Infomation

pacid=37425726 locus=PGSC0003DMG401022374 ID=PGSC0003DMT400057621.v4.03 annot-version=v4.03
Sequence

ATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGA
TGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAA
CCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATC
ACTATGAGGCCACCTTCAACTCATGCCTATTGGTTCACCAAAGCCACATTCCTAAGATTT
GTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATC
TCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGA
AGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGCAAAATCT
GAAGTTGAAGAAGCTAATATTGCTGCACCTAAAGAAAACTCCAAGATTCACCTCCAGCGC
CACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCA
ACAGTTGCAGGCTTTGAGATTGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTT
GGTGCCTTACGTCTTAGGGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCAC
ACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTA
TCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGGATAGT
TCTGACTCGAAGGAATCAACAAATTCAAATGGTGTCAAAGATGAGAATCTTCCTGCATCA
GATCCATCAGCAAAAGTTCAGATGCAAATGCCATGGCAGAACCAAATTCCTCCGTATATG
TACAACTTTCATGGCCCAGCTCAACAGATGCCTTTTGCTGGCATGCATCCTTTACAATAT
TATCCAGCACATATGCAGTGGCCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGG
GACTCTCACAAACGGTCAAAGAAGAAGGAGAAATCCAAAGAACATGACAGTTCAGAAGAT
GATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGAGGAAGTTAGGAAG
CATGAGAAAAAGCATTCTTCAAGGGAGAATTCACATGCTAAAAAGCACAAGAAGAAATCC
TCAAAAACAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAA
AATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATGAAGATTCT
CTCAAAGAGCAGGTAGATGATGCTGTTGCAATACTGGAGAAACGTCGCAACTCAAAAGGA
CATAGGAACAAGAATAGAGGACATCAGAATCTTGATATAGAGAATGAATCAAATGGTTAT
AGCAACACAGACCTAAATGAGGGCATGTCACCTAAGTTATCTGAGAAAGCAAAAGGAAAT
AAGGCTTGGGATGCATTCCAGAATATTCTGATGAGTCGTGAGGAGGCAAGTATGAATGGA
GCAAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGT
GAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTCTCATGAGCAAAAATCAT
GAAGAAAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCA
AGTTTGAAGAAAGGAGCTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCA
GGAGGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAAT
AGTAATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGGCT
AGGCGAATAATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTC
GAAAGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCATCTTTT
GATGATCATTATGGCTCTCAGTGGAAAACAGACATTGGCATGGACGCAGACTTGGTTGCT
GCAGCAAATGCTGAAAATGGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATCTGGG
ACCAGTCAACCTGATGACCTCTGTGTGGTGCTTGCAAGAGAACCTAGTTTGGATCCTCTT
GAGGCATCTTGGCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGAT
AAAAAATCTCCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAA
GGTAAAAGCACAACTAAGAAGGATGGTCTTGCAAAGACCGGGAAAGATGCAAGGTCTAAA
GTCTCCCCAGGATCTCTGTCAAGGAGCAGAATTGATGCCTTAGCAAAGAGCAAGAAGATG
TCTCCTCCTCCTAACAAGCTGACAACCCAGAAGAGCAAATTAGATCGGGTACGACAATAA