Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057609
CDS Infomation

pacid=37428690 polypeptide=PGSC0003DMP400038768 locus=PGSC0003DMG400022369 ID=PGSC0003DMT400057609.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGACGAATCAGAACAAAGCTTTAACGAATACTCGTTTCTCCGACCTCGAACCG
CGGCTTGCTGAGCCAGTTTTGGAAGCCCTAACCAACTCCGGCTTCGAGTTCTGTACTCCT
GTTCAGGCCGCCACCATACCCTTACTCTGCAGCTACAAGGATGTCACCGTCGACGCCGCC
ACTGGCTCTGGTAAAACCCTAGCCTTCGTTTTACCTGTGGTTGAGATCATCCGTCGCTCC
TCTTCCAATCCTAAGCCTCACAAGGTAATGGGTATAATTATATCACCCACCAGGGAGTTG
TCGTCGCAAATATTTCATGTTGCTCAGCCATTCATTTCCACATTAGCAAATGTTAGGCCT
ATGCTTCTTGTTGGAGGATTAGAAGTAAAGGCAGATATCAAAAAGATAGAGGAGGAAGGA
GCAAATTTGTTGATTGGGACACCTGGGAGGCTATATGACATAATGGAGCGCATGGATATA
CTGGACTTTCGGGATCTTGAGATCCTGATATTAGATGAGGCTGATAGGCTATTAGGCATG
GGATTCGAGAAGCAGCTAAATTCAATCATTTGTCGTTTACCTAAGCTTCGTAGAACGGGT
CTCTTCTCTGCTACTCAAACTGAAGCAGTTGAAGAACTATCAAAGGCAGGATTGAGAAAT
CCTGTCAGGGTTGAAGTTCGGGCAGAAGCAAAACAGTTGAGCGGTTCTGCGTCTGGGAAT
TCGACCTCGTCAAAAACACCTTCTGGCCTTCATATTGAGTATCTGGAATGTGAAGCGGAC
AAGAAATCATCGCAGCTTGTACACCTCATAACAAAGAACAAGTCAAAAAAAATTATAGTT
TATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAACTATTCTTCCACGTCTCTCTTGT
CTGAAAAGTTTTTCATTAATCTCTCTTCATGGAAGGATGAAGCAGAGTGCAAGGGAGAAA
GCACTAGCATCATTTACAGCTCTTTCCACTGGTGTTCTTTTATGCACAGATGTAGCAGCA
CGTGGACTTGATATTGCAGGTGTTGATTATATAATACAGTATGACCTTCCTCAGGATGAT
AAAATGTTTATACATAGAGTAGGCCGAACAGCTAGGCTGGGCCGACAAGGTAGTGCTGTT
GTTTTTCTATTACCAAAGGAGGAAGCATATGTGGAGTTCTTGCGTATAAAAGACGTTTTC
TTAGAAGAGGGGGAATGTGCCTCTGATGCTCCTGATATTATAGATGAAATACGGTCAGCA
GCAAAGAAAGATCGTGATGTAATGGAGAAAGGACTCAGAGCCTTTGTATCATACATCCGT
GCATATAAAGAGCACCACTGCTCTTACATTTTAAGGTGGAAGGAGCTTGAGATTGGGAAG
CTGGGCATGGGATATGGTCTTTTGCAACTTCCTTCTGTGCCTGATGTGAAGCATCATTCT
CTTTCTACAAAGGGATTCACTGCTGTTGAAGATATCAACCTGGACGAGATCAAGTTTAAG
GACAAGTCCAGGGAGAAGCAAAGAAAGAAGAATTTACAAGTGAAAAAAGCTGCAATGGCA
CAACAACAAGAACAGAAGACACAGAGACTTAAAAAAGAAGCAAATTCTACAGCAACTGCC
TCGAGAAAGAGAACTGCCAAACAAAGACGTGCTACACAGTTAGTTGAAGATGAAGATGAG
ATCACAAGGGAGTACCGCTTATTGAAAAAGCTAAAAAAGGGTGCTATCGATGAGAATGAG
TTTGCAAAATTGACTGGGACAGAAGACTTGCTTTCTGACATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038768
PEP Infomation

pacid=37428690 transcript=PGSC0003DMT400057609 locus=PGSC0003DMG400022369 ID=PGSC0003DMT400057609.v4.03 annot-version=v4.03
Sequence

MASTNQNKALTNTRFSDLEPRLAEPVLEALTNSGFEFCTPVQAATIPLLCSYKDVTVDAA
TGSGKTLAFVLPVVEIIRRSSSNPKPHKVMGIIISPTRELSSQIFHVAQPFISTLANVRP
MLLVGGLEVKADIKKIEEEGANLLIGTPGRLYDIMERMDILDFRDLEILILDEADRLLGM
GFEKQLNSIICRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLSGSASGN
STSSKTPSGLHIEYLECEADKKSSQLVHLITKNKSKKIIVYFMTCACVDYWGTILPRLSC
LKSFSLISLHGRMKQSAREKALASFTALSTGVLLCTDVAARGLDIAGVDYIIQYDLPQDD
KMFIHRVGRTARLGRQGSAVVFLLPKEEAYVEFLRIKDVFLEEGECASDAPDIIDEIRSA
AKKDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGMGYGLLQLPSVPDVKHHS
LSTKGFTAVEDINLDEIKFKDKSREKQRKKNLQVKKAAMAQQQEQKTQRLKKEANSTATA
SRKRTAKQRRATQLVEDEDEITREYRLLKKLKKGAIDENEFAKLTGTEDLLSDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057609
Transcript Infomation

pacid=37428690 locus=PGSC0003DMG400022369 ID=PGSC0003DMT400057609.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGACGAATCAGAACAAAGCTTTAACGAATACTCGTTTCTCCGACCTCGAACCG
CGGCTTGCTGAGCCAGTTTTGGAAGCCCTAACCAACTCCGGCTTCGAGTTCTGTACTCCT
GTTCAGGCCGCCACCATACCCTTACTCTGCAGCTACAAGGATGTCACCGTCGACGCCGCC
ACTGGCTCTGGTAAAACCCTAGCCTTCGTTTTACCTGTGGTTGAGATCATCCGTCGCTCC
TCTTCCAATCCTAAGCCTCACAAGGTAATGGGTATAATTATATCACCCACCAGGGAGTTG
TCGTCGCAAATATTTCATGTTGCTCAGCCATTCATTTCCACATTAGCAAATGTTAGGCCT
ATGCTTCTTGTTGGAGGATTAGAAGTAAAGGCAGATATCAAAAAGATAGAGGAGGAAGGA
GCAAATTTGTTGATTGGGACACCTGGGAGGCTATATGACATAATGGAGCGCATGGATATA
CTGGACTTTCGGGATCTTGAGATCCTGATATTAGATGAGGCTGATAGGCTATTAGGCATG
GGATTCGAGAAGCAGCTAAATTCAATCATTTGTCGTTTACCTAAGCTTCGTAGAACGGGT
CTCTTCTCTGCTACTCAAACTGAAGCAGTTGAAGAACTATCAAAGGCAGGATTGAGAAAT
CCTGTCAGGGTTGAAGTTCGGGCAGAAGCAAAACAGTTGAGCGGTTCTGCGTCTGGGAAT
TCGACCTCGTCAAAAACACCTTCTGGCCTTCATATTGAGTATCTGGAATGTGAAGCGGAC
AAGAAATCATCGCAGCTTGTACACCTCATAACAAAGAACAAGTCAAAAAAAATTATAGTT
TATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAACTATTCTTCCACGTCTCTCTTGT
CTGAAAAGTTTTTCATTAATCTCTCTTCATGGAAGGATGAAGCAGAGTGCAAGGGAGAAA
GCACTAGCATCATTTACAGCTCTTTCCACTGGTGTTCTTTTATGCACAGATGTAGCAGCA
CGTGGACTTGATATTGCAGGTGTTGATTATATAATACAGTATGACCTTCCTCAGGATGAT
AAAATGTTTATACATAGAGTAGGCCGAACAGCTAGGCTGGGCCGACAAGGTAGTGCTGTT
GTTTTTCTATTACCAAAGGAGGAAGCATATGTGGAGTTCTTGCGTATAAAAGACGTTTTC
TTAGAAGAGGGGGAATGTGCCTCTGATGCTCCTGATATTATAGATGAAATACGGTCAGCA
GCAAAGAAAGATCGTGATGTAATGGAGAAAGGACTCAGAGCCTTTGTATCATACATCCGT
GCATATAAAGAGCACCACTGCTCTTACATTTTAAGGTGGAAGGAGCTTGAGATTGGGAAG
CTGGGCATGGGATATGGTCTTTTGCAACTTCCTTCTGTGCCTGATGTGAAGCATCATTCT
CTTTCTACAAAGGGATTCACTGCTGTTGAAGATATCAACCTGGACGAGATCAAGTTTAAG
GACAAGTCCAGGGAGAAGCAAAGAAAGAAGAATTTACAAGTGAAAAAAGCTGCAATGGCA
CAACAACAAGAACAGAAGACACAGAGACTTAAAAAAGAAGCAAATTCTACAGCAACTGCC
TCGAGAAAGAGAACTGCCAAACAAAGACGTGCTACACAGTTAGTTGAAGATGAAGATGAG
ATCACAAGGGAGTACCGCTTATTGAAAAAGCTAAAAAAGGGTGCTATCGATGAGAATGAG
TTTGCAAAATTGACTGGGACAGAAGACTTGCTTTCTGACATATGA