Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057603
CDS Infomation

pacid=37427695 polypeptide=PGSC0003DMP400038764 locus=PGSC0003DMG400022368 ID=PGSC0003DMT400057603.v4.03 annot-version=v4.03
Sequence

ATGGCATTGGTAAGGGCTGCAAGGAGTAGCTTTAGGCGTTCTGGAGGTGCAATTGGAAAC
TATGCAAGTGAGAGAAATATATTCTGTGAAGGCATTTCACCATTGAGACATCCTGCACCA
GTTTTTGAAAAAGCTGTAACAGGTTTCAATTCGTCATACATTCCAAGTACGCAGATGATA
AATCAATTAAGTTTCGGGAACAGAGGAATGAAGTTTACCCCTCAATATCAGTTTCCACAT
GCAGAAGCTCAGACGGTTGGGGGTTCTGATTCAAAGAATGAAAGATCCAGTTATCCAGGC
CTTGAAGCAACAAAACAGGGCGAAAAACCTAGAGTAGTTGTTCTTGGATCTGGTTGGGCC
GCTTGCAGATTCCTCAAAGGAATAGACACTACTATGTATGATGTTGTTTGTATAGCACCA
AGAAACCATATGGTTTTTACACCTTTGCTTGCATCTACTTGTGTTGGAACATTGGAATTC
CGATCAGTTGCTGAACCAGTTACCCAGATACAGAAAGCACTGGCAAAGGATCCAAATTCA
TATTTCTTCCTAGCATCCTGCACTGGTGTTGATGCTGATAAACATGAAGTATACTGTCAA
ACAGTTGGCGATCGTGGAGTCTCTCATGAGCATTACAGATTTAAGGTTGCATATGACAAG
CTTGTCATTGCTTCTGGAGCCGAACCTTTGACCTTTGGCATAAAGGGAGTGGAGGAACAT
GCCTTCTTTCTCCGTGAAGTACAGAATGCCCAAGAAATCAGGAAGAAGCTTCTTATGAAC
TTGATGGTCTCAGAAACTCCAGGCATTTCGGAAGAAGAGAAAGAGCGCTTGTTGCACTGT
GTTGTGATTGGAGGTGGCCCTACAGGGGTTGAATTCAGCGGGGAGCTAAGTGATTTTATC
ATGAGAGATGTACGCGAACGTTATGCTCATGTCAAAAACTACATTCATGTAACCCTAATT
GAGGCTAATGAGATTTTGTCTTCATTTGATGTTGGGTTGCGGGAATATGCGACAAAGCAT
TTGACCAAGGTTGGTGTCCGCCTTGTTCATGGTGTTGTAAAAGAAGTACATCCAGATAAA
ATAGTTCTCAGTGATGGAAGCGATGTTCCATATGGCCTTCTCGTTTGGTCTACTGGAGTT
GGTCCTTCCAAATTTATTAAATCACTAGATATTCCCAAGTCTCCTGGTGGAAGGATTGGA
ATCGATGAATGGTTGCGAGTTCCTTCTGTAGAAGATGTGTTTGCAATAGGAGATTGTGCT
GGTTTTCTTGAACAGACTGGAAAGCCGGTGCTTCCGGCTCTTGCTCAGGTTGCTGAAAGG
CAAGGGAAGTATCTTGTTAAATTGTTCACCGACATTGGGAAACAGAATGGAGGCAAAGCT
CTCTCAGCCAAAGACATCACTCTAGGAGATCCATTTGTTTACAAGCATCTTGGAAGCATG
GCAACTGTGGGGCGTTACAAGGCTCTTGTTGATCTCCGTCAAGCTAAGGGTGAGAAGGGT
GTCTCGTTAGCAGGCTTCATGAGCTGGTTTATTTGGCGCTCCGCATATCTGACTCGAGTT
ATCAGCTGGAGGAACAGGTTTTATGTGGCTATGAACTGGGGAACAACGTTAATCTTTGGC
AGAGACAATACTAAGATAGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400038764
PEP Infomation

pacid=37427695 transcript=PGSC0003DMT400057603 locus=PGSC0003DMG400022368 ID=PGSC0003DMT400057603.v4.03 annot-version=v4.03
Sequence

MALVRAARSSFRRSGGAIGNYASERNIFCEGISPLRHPAPVFEKAVTGFNSSYIPSTQMI
NQLSFGNRGMKFTPQYQFPHAEAQTVGGSDSKNERSSYPGLEATKQGEKPRVVVLGSGWA
ACRFLKGIDTTMYDVVCIAPRNHMVFTPLLASTCVGTLEFRSVAEPVTQIQKALAKDPNS
YFFLASCTGVDADKHEVYCQTVGDRGVSHEHYRFKVAYDKLVIASGAEPLTFGIKGVEEH
AFFLREVQNAQEIRKKLLMNLMVSETPGISEEEKERLLHCVVIGGGPTGVEFSGELSDFI
MRDVRERYAHVKNYIHVTLIEANEILSSFDVGLREYATKHLTKVGVRLVHGVVKEVHPDK
IVLSDGSDVPYGLLVWSTGVGPSKFIKSLDIPKSPGGRIGIDEWLRVPSVEDVFAIGDCA
GFLEQTGKPVLPALAQVAERQGKYLVKLFTDIGKQNGGKALSAKDITLGDPFVYKHLGSM
ATVGRYKALVDLRQAKGEKGVSLAGFMSWFIWRSAYLTRVISWRNRFYVAMNWGTTLIFG
RDNTKIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400057603
Transcript Infomation

pacid=37427695 locus=PGSC0003DMG400022368 ID=PGSC0003DMT400057603.v4.03 annot-version=v4.03
Sequence

ATGGCATTGGTAAGGGCTGCAAGGAGTAGCTTTAGGCGTTCTGGAGGTGCAATTGGAAAC
TATGCAAGTGAGAGAAATATATTCTGTGAAGGCATTTCACCATTGAGACATCCTGCACCA
GTTTTTGAAAAAGCTGTAACAGGTTTCAATTCGTCATACATTCCAAGTACGCAGATGATA
AATCAATTAAGTTTCGGGAACAGAGGAATGAAGTTTACCCCTCAATATCAGTTTCCACAT
GCAGAAGCTCAGACGGTTGGGGGTTCTGATTCAAAGAATGAAAGATCCAGTTATCCAGGC
CTTGAAGCAACAAAACAGGGCGAAAAACCTAGAGTAGTTGTTCTTGGATCTGGTTGGGCC
GCTTGCAGATTCCTCAAAGGAATAGACACTACTATGTATGATGTTGTTTGTATAGCACCA
AGAAACCATATGGTTTTTACACCTTTGCTTGCATCTACTTGTGTTGGAACATTGGAATTC
CGATCAGTTGCTGAACCAGTTACCCAGATACAGAAAGCACTGGCAAAGGATCCAAATTCA
TATTTCTTCCTAGCATCCTGCACTGGTGTTGATGCTGATAAACATGAAGTATACTGTCAA
ACAGTTGGCGATCGTGGAGTCTCTCATGAGCATTACAGATTTAAGGTTGCATATGACAAG
CTTGTCATTGCTTCTGGAGCCGAACCTTTGACCTTTGGCATAAAGGGAGTGGAGGAACAT
GCCTTCTTTCTCCGTGAAGTACAGAATGCCCAAGAAATCAGGAAGAAGCTTCTTATGAAC
TTGATGGTCTCAGAAACTCCAGGCATTTCGGAAGAAGAGAAAGAGCGCTTGTTGCACTGT
GTTGTGATTGGAGGTGGCCCTACAGGGGTTGAATTCAGCGGGGAGCTAAGTGATTTTATC
ATGAGAGATGTACGCGAACGTTATGCTCATGTCAAAAACTACATTCATGTAACCCTAATT
GAGGCTAATGAGATTTTGTCTTCATTTGATGTTGGGTTGCGGGAATATGCGACAAAGCAT
TTGACCAAGGTTGGTGTCCGCCTTGTTCATGGTGTTGTAAAAGAAGTACATCCAGATAAA
ATAGTTCTCAGTGATGGAAGCGATGTTCCATATGGCCTTCTCGTTTGGTCTACTGGAGTT
GGTCCTTCCAAATTTATTAAATCACTAGATATTCCCAAGTCTCCTGGTGGAAGGATTGGA
ATCGATGAATGGTTGCGAGTTCCTTCTGTAGAAGATGTGTTTGCAATAGGAGATTGTGCT
GGTTTTCTTGAACAGACTGGAAAGCCGGTGCTTCCGGCTCTTGCTCAGGTTGCTGAAAGG
CAAGGGAAGTATCTTGTTAAATTGTTCACCGACATTGGGAAACAGAATGGAGGCAAAGCT
CTCTCAGCCAAAGACATCACTCTAGGAGATCCATTTGTTTACAAGCATCTTGGAAGCATG
GCAACTGTGGGGCGTTACAAGGCTCTTGTTGATCTCCGTCAAGCTAAGGGTGAGAAGGGT
GTCTCGTTAGCAGGCTTCATGAGCTGGTTTATTTGGCGCTCCGCATATCTGACTCGAGTT
ATCAGCTGGAGGAACAGGTTTTATGTGGCTATGAACTGGGGAACAACGTTAATCTTTGGC
AGAGACAATACTAAGATAGGATAA