Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057532
CDS Infomation

pacid=37426058 polypeptide=PGSC0003DMP400038717 locus=PGSC0003DMG400022346 ID=PGSC0003DMT400057532.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTCCCAAGCTCGGTAAGAAATCAGGTTCTAAATTAGGGAAACTCCCTGCCAAG
AAGAAGCAAAAGAAGGAACCTTTGCCAGCTAAGCCACTGGAAAAGGAGGAACTTTTTAGT
GATAGTGAAGGAACGGATGGGGATTTTCAAGAAGATGATGAACAGAAAATTAATTCAGAT
TCTGAGATGTCTTCTGACATCGATGACCCCTTTGCTGCTGATATATTAGGAAGTGGTGAT
GCTGATGATGGTTCAGATGTTAATTCGGATTCAAATGCAGATTCTGACTCTGATGCAGAT
GATAATGATCTTGTAAGGAAGTCTAAAGCTATTGATGATGAAAGGAAAAGAGAAGAAGAG
GACAATGATTTAGAACTGCAGCTCAATATTAAAGAAGAAGCTGATGATTTCAGACTGCCG
ACAACTGAGGAGCTTGAAGAAGAAACACAGAGACCCCCGGATCTCTCTAACCTCCAAAGG
AGGATAAAAGAGATTGTTAGAGTGCTTTCAAATTTGAAGTCATTGAGGCAAGAAGGTGTG
ACACGTAAGGATTACGTTGATCAACTTAAAAGCGACTTGGGTTCATATTATGGATACAAT
GATTTTCTGATTGAGTCATTGGTGGAGTTGTTTCCCCCTGTTGAGCTGATTGAACTTATT
GAAGCATTTGAAAAACCTAGACCAATTTCTCTACGGACAAACACTTTGAAGTCTCGCAGA
CGGGATTTAGCTGGCGTTCTTCTTAACAGAGGTGTCAATTTGGACCCATTAAGCAAATGG
TCAAAGGTTGGACTAGTTGTTTATGATTCTCAAGTTCCAGTTGGTGCCACTCCTGAGTAT
ATGGCTGGTCATTACATGCTCCAAAGTGCAAGCTCTTTTCTGCCTGTAATGGCTCTTGCC
CCCCAGGAGAATGAACGTGTCGTTGATATGGCTGCTGCTCCTGGAGGCAAAACAACTTAT
GTTGCTGCACTGATGAAAAATAGTGGTATTATTTATGCAAATGAGATGAAGGAGTCAAGA
CTTAAATCTCTCACTGCCAATTTACATCGCATGGGGGTAACAAACACCATTGTCTGCAAC
TACGATGGAAGAGAGTTGCCTAAAGTTTTGGGTCAGAACACTGCTGATAGGATTTTGCTG
GATGCTCCCTGCAGTGGCACTGGGGTAATCTCCAAAGATGAGTCTGTTAAAACTTCCAAA
ACTGCACCTGATATACAAAATTGCTCACAACTGCAGAAGGAACTAATACTTGCAGCAATT
GACATGGTTGATGCCAACTCAAAATCAGGTGGATACATTGTGTATTCGACCTGCTCCATT
ATGGTTGAAGAGAATGAAGCAGTTATAGATTATGCACTCAAGAAGAGAGATGTTAAGCTT
GTGCCATGTGGACTTGATTTTGGGAGGCCTGGATTTATTCGGTTTAGGCAGCACCGTTTC
CACACATCTTTGGACAAGACAAGGCGATTCTATCCTCATGTGCACAACATGGATGGATTC
TTTGTAGCCAAGTTGAAAAAGATGAGCAATTCTAAGTCTGCTGCTAAATCGTCGGTTCAG
TCTGAAGAAGTACAAGGTACTGAAAGCATTGAGAACAGTGACCAGCAGGATTCTGAAGAA
GATGATGACAAGCATTCAGATAAAAAAGGCATTGCAAATGAGAATAGGAAATTGAAAGAG
GAAGTAGCAGGTGATAAAAAGAGGAAGAGGGATGTCCAAACACATTCAGTTAAGAAAGGT
GCTGGACAAAACAGCGGTGCAACTAAAAATGGAAAAGCAGAAAACCAAGTGGTGGCAACA
AAAAAGAGGGAAAAGAAGAAACCCCTTCCTAGAGAGGAAATTGCAAAAGCTAGGGAAGAG
AAGAGGAAAGCCCTTAGGGAAGCTACACGAAAAGCCACGATGAAGAACAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038717
PEP Infomation

pacid=37426058 transcript=PGSC0003DMT400057532 locus=PGSC0003DMG400022346 ID=PGSC0003DMT400057532.v4.03 annot-version=v4.03
Sequence

MAGPKLGKKSGSKLGKLPAKKKQKKEPLPAKPLEKEELFSDSEGTDGDFQEDDEQKINSD
SEMSSDIDDPFAADILGSGDADDGSDVNSDSNADSDSDADDNDLVRKSKAIDDERKREEE
DNDLELQLNIKEEADDFRLPTTEELEEETQRPPDLSNLQRRIKEIVRVLSNLKSLRQEGV
TRKDYVDQLKSDLGSYYGYNDFLIESLVELFPPVELIELIEAFEKPRPISLRTNTLKSRR
RDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLPVMALA
PQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTNTIVCN
YDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAPDIQNCSQLQKELILAAI
DMVDANSKSGGYIVYSTCSIMVEENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRQHRF
HTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSSVQSEEVQGTESIENSDQQDSEE
DDDKHSDKKGIANENRKLKEEVAGDKKRKRDVQTHSVKKGAGQNSGATKNGKAENQVVAT
KKREKKKPLPREEIAKAREEKRKALREATRKATMKNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400057532
Transcript Infomation

pacid=37426058 locus=PGSC0003DMG400022346 ID=PGSC0003DMT400057532.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTCCCAAGCTCGGTAAGAAATCAGGTTCTAAATTAGGGAAACTCCCTGCCAAG
AAGAAGCAAAAGAAGGAACCTTTGCCAGCTAAGCCACTGGAAAAGGAGGAACTTTTTAGT
GATAGTGAAGGAACGGATGGGGATTTTCAAGAAGATGATGAACAGAAAATTAATTCAGAT
TCTGAGATGTCTTCTGACATCGATGACCCCTTTGCTGCTGATATATTAGGAAGTGGTGAT
GCTGATGATGGTTCAGATGTTAATTCGGATTCAAATGCAGATTCTGACTCTGATGCAGAT
GATAATGATCTTGTAAGGAAGTCTAAAGCTATTGATGATGAAAGGAAAAGAGAAGAAGAG
GACAATGATTTAGAACTGCAGCTCAATATTAAAGAAGAAGCTGATGATTTCAGACTGCCG
ACAACTGAGGAGCTTGAAGAAGAAACACAGAGACCCCCGGATCTCTCTAACCTCCAAAGG
AGGATAAAAGAGATTGTTAGAGTGCTTTCAAATTTGAAGTCATTGAGGCAAGAAGGTGTG
ACACGTAAGGATTACGTTGATCAACTTAAAAGCGACTTGGGTTCATATTATGGATACAAT
GATTTTCTGATTGAGTCATTGGTGGAGTTGTTTCCCCCTGTTGAGCTGATTGAACTTATT
GAAGCATTTGAAAAACCTAGACCAATTTCTCTACGGACAAACACTTTGAAGTCTCGCAGA
CGGGATTTAGCTGGCGTTCTTCTTAACAGAGGTGTCAATTTGGACCCATTAAGCAAATGG
TCAAAGGTTGGACTAGTTGTTTATGATTCTCAAGTTCCAGTTGGTGCCACTCCTGAGTAT
ATGGCTGGTCATTACATGCTCCAAAGTGCAAGCTCTTTTCTGCCTGTAATGGCTCTTGCC
CCCCAGGAGAATGAACGTGTCGTTGATATGGCTGCTGCTCCTGGAGGCAAAACAACTTAT
GTTGCTGCACTGATGAAAAATAGTGGTATTATTTATGCAAATGAGATGAAGGAGTCAAGA
CTTAAATCTCTCACTGCCAATTTACATCGCATGGGGGTAACAAACACCATTGTCTGCAAC
TACGATGGAAGAGAGTTGCCTAAAGTTTTGGGTCAGAACACTGCTGATAGGATTTTGCTG
GATGCTCCCTGCAGTGGCACTGGGGTAATCTCCAAAGATGAGTCTGTTAAAACTTCCAAA
ACTGCACCTGATATACAAAATTGCTCACAACTGCAGAAGGAACTAATACTTGCAGCAATT
GACATGGTTGATGCCAACTCAAAATCAGGTGGATACATTGTGTATTCGACCTGCTCCATT
ATGGTTGAAGAGAATGAAGCAGTTATAGATTATGCACTCAAGAAGAGAGATGTTAAGCTT
GTGCCATGTGGACTTGATTTTGGGAGGCCTGGATTTATTCGGTTTAGGCAGCACCGTTTC
CACACATCTTTGGACAAGACAAGGCGATTCTATCCTCATGTGCACAACATGGATGGATTC
TTTGTAGCCAAGTTGAAAAAGATGAGCAATTCTAAGTCTGCTGCTAAATCGTCGGTTCAG
TCTGAAGAAGTACAAGGTACTGAAAGCATTGAGAACAGTGACCAGCAGGATTCTGAAGAA
GATGATGACAAGCATTCAGATAAAAAAGGCATTGCAAATGAGAATAGGAAATTGAAAGAG
GAAGTAGCAGGTGATAAAAAGAGGAAGAGGGATGTCCAAACACATTCAGTTAAGAAAGGT
GCTGGACAAAACAGCGGTGCAACTAAAAATGGAAAAGCAGAAAACCAAGTGGTGGCAACA
AAAAAGAGGGAAAAGAAGAAACCCCTTCCTAGAGAGGAAATTGCAAAAGCTAGGGAAGAG
AAGAGGAAAGCCCTTAGGGAAGCTACACGAAAAGCCACGATGAAGAACAAATGA