Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057528
CDS Infomation

pacid=37424410 polypeptide=PGSC0003DMP400038714 locus=PGSC0003DMG400022344 ID=PGSC0003DMT400057528.v4.03 annot-version=v4.03
Sequence

ATGGGTAACCTTCAAATTCTCTCTCTTTTAATCTTTTCATTCTTTTTGTCAAAATGTTAC
TCCAAACAAGAAGATTTTGTTCAGTGTCTTTCTAAATACTCTAAAACCAACGTTACACAA
AACATCTACTCCCCAAAATCTCCAACATATTCATCTATCTTAGAATATGCTCAAAAAAAT
CCTAGATGGATGAATTCTTCACATCCCATTTTCATAGTTTCCCCTACAAAAGAATCACAA
ATCAAGCCGGTTATTCGTTGTGCAAAAAAATTAGGCTTACAAATTAAAATAAAAAGTGGT
GGCCATGACTATGAAGGCATATCTTTTCGCTCTAAATCCCCGTTTGTTATGCTTGATTTA
AGCAATCTTAACAAAATCAAGATTGATTTAAATGAAGGAACAGTTTGGGTTCAAGCAGGG
GCGACCCTCGGCCAACTTTACTATGCAATTGCTAAAAAAAGTAATGTGCATGGTTTTCCT
GGAGGTGTTTGTTTCAGTATTGGCACTGGAGGGATTATTAGTGGTGGAGGGATAGGTACT
TTGATGAGAAAATTCGGGCTTGCAGCTGATAATGTTGTAGATGCTCGCGTAATAGATGTA
AATGGAAAAATTCTTAATAAAAACAAAATGAAAGAAGATTTGTTTTGGGCAATAAGAGGA
GGTGGAGGAGCAAGTTTTGGTGTTATTTTAGCATGGAAACTCAAACTTGTTCGTGTTCCT
GACAAGGTTACTGTTTTCACTGTTTACAAGAGGTTACAAGGTAATCAAAATCTCCTCAAA
AAATGGGAAAACATCGCGCATCAATTACCTGATAAATTACTTATCAGAGTAATTATACAA
AATGATGGAACAGAGAATGAAAAGTATGTTGAAATAATCTTTCAATCACTATATCTCGGA
CCTGTTGATGAGTTGATTCCATTGCTCAAAGAAAAATTCCCTGAATTTGATTTGGAGAAA
AAAGATTGCTTCCAAGAGCCTGTTGTGGATTGTAGTAACAGGCCTTGTATTAAAAAAGAA
TGTCGCGAATCGTCCTGGATTGGATCAGTCCTGTATTTCTATGGCAGGAGAACAAATGAG
TCACTTGAAGTTCTGCTAGAAAAGAGTATTCCAACACAGAAGAATTATTTCAAAGCCACT
TCTGATTTTGTGAAGACTCCAATTCCGGAAAGTGGTTGGGAAATGGTAAAAAGACTGTTT
TTGGAAGAAGAAAGACCTCTGATGATAATGGAGCCATTAGGTGGGATATTAGATAAAATA
TCAGAATCTGAAATTCCATTCCCTCATAGAAAGGGGAATTTGTATAATATTCAGTACTTG
GTGAATTGGGGCGATAACAGCGAGAGTATATCAAGCCAGAAGATAGCATGGATGAGGAAA
CTGTACAAGAAAATGGAGCCATATGTTGCAAAATCACCAAGAAGTGCTTATCTGAACTAT
AGGGATCTTGATTTTGGAACAAATTCAGAGGACTACAGTTATTCCAAGGCTAAAATATGG
GGTGAAAAGTATTTTAGGGGCAACTTTGAGAGATTGGCTAAAGTGAAGAGTGAAGTGGAT
CCCAAAAATTTCTTCAGAAATGAACAAAGCATTCCACCTTATCACACTGATAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038714
PEP Infomation

pacid=37424410 transcript=PGSC0003DMT400057528 locus=PGSC0003DMG400022344 ID=PGSC0003DMT400057528.v4.03 annot-version=v4.03
Sequence

MGNLQILSLLIFSFFLSKCYSKQEDFVQCLSKYSKTNVTQNIYSPKSPTYSSILEYAQKN
PRWMNSSHPIFIVSPTKESQIKPVIRCAKKLGLQIKIKSGGHDYEGISFRSKSPFVMLDL
SNLNKIKIDLNEGTVWVQAGATLGQLYYAIAKKSNVHGFPGGVCFSIGTGGIISGGGIGT
LMRKFGLAADNVVDARVIDVNGKILNKNKMKEDLFWAIRGGGGASFGVILAWKLKLVRVP
DKVTVFTVYKRLQGNQNLLKKWENIAHQLPDKLLIRVIIQNDGTENEKYVEIIFQSLYLG
PVDELIPLLKEKFPEFDLEKKDCFQEPVVDCSNRPCIKKECRESSWIGSVLYFYGRRTNE
SLEVLLEKSIPTQKNYFKATSDFVKTPIPESGWEMVKRLFLEEERPLMIMEPLGGILDKI
SESEIPFPHRKGNLYNIQYLVNWGDNSESISSQKIAWMRKLYKKMEPYVAKSPRSAYLNY
RDLDFGTNSEDYSYSKAKIWGEKYFRGNFERLAKVKSEVDPKNFFRNEQSIPPYHTDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400057528
Transcript Infomation

pacid=37424410 locus=PGSC0003DMG400022344 ID=PGSC0003DMT400057528.v4.03 annot-version=v4.03
Sequence

ATGGGTAACCTTCAAATTCTCTCTCTTTTAATCTTTTCATTCTTTTTGTCAAAATGTTAC
TCCAAACAAGAAGATTTTGTTCAGTGTCTTTCTAAATACTCTAAAACCAACGTTACACAA
AACATCTACTCCCCAAAATCTCCAACATATTCATCTATCTTAGAATATGCTCAAAAAAAT
CCTAGATGGATGAATTCTTCACATCCCATTTTCATAGTTTCCCCTACAAAAGAATCACAA
ATCAAGCCGGTTATTCGTTGTGCAAAAAAATTAGGCTTACAAATTAAAATAAAAAGTGGT
GGCCATGACTATGAAGGCATATCTTTTCGCTCTAAATCCCCGTTTGTTATGCTTGATTTA
AGCAATCTTAACAAAATCAAGATTGATTTAAATGAAGGAACAGTTTGGGTTCAAGCAGGG
GCGACCCTCGGCCAACTTTACTATGCAATTGCTAAAAAAAGTAATGTGCATGGTTTTCCT
GGAGGTGTTTGTTTCAGTATTGGCACTGGAGGGATTATTAGTGGTGGAGGGATAGGTACT
TTGATGAGAAAATTCGGGCTTGCAGCTGATAATGTTGTAGATGCTCGCGTAATAGATGTA
AATGGAAAAATTCTTAATAAAAACAAAATGAAAGAAGATTTGTTTTGGGCAATAAGAGGA
GGTGGAGGAGCAAGTTTTGGTGTTATTTTAGCATGGAAACTCAAACTTGTTCGTGTTCCT
GACAAGGTTACTGTTTTCACTGTTTACAAGAGGTTACAAGGTAATCAAAATCTCCTCAAA
AAATGGGAAAACATCGCGCATCAATTACCTGATAAATTACTTATCAGAGTAATTATACAA
AATGATGGAACAGAGAATGAAAAGTATGTTGAAATAATCTTTCAATCACTATATCTCGGA
CCTGTTGATGAGTTGATTCCATTGCTCAAAGAAAAATTCCCTGAATTTGATTTGGAGAAA
AAAGATTGCTTCCAAGAGCCTGTTGTGGATTGTAGTAACAGGCCTTGTATTAAAAAAGAA
TGTCGCGAATCGTCCTGGATTGGATCAGTCCTGTATTTCTATGGCAGGAGAACAAATGAG
TCACTTGAAGTTCTGCTAGAAAAGAGTATTCCAACACAGAAGAATTATTTCAAAGCCACT
TCTGATTTTGTGAAGACTCCAATTCCGGAAAGTGGTTGGGAAATGGTAAAAAGACTGTTT
TTGGAAGAAGAAAGACCTCTGATGATAATGGAGCCATTAGGTGGGATATTAGATAAAATA
TCAGAATCTGAAATTCCATTCCCTCATAGAAAGGGGAATTTGTATAATATTCAGTACTTG
GTGAATTGGGGCGATAACAGCGAGAGTATATCAAGCCAGAAGATAGCATGGATGAGGAAA
CTGTACAAGAAAATGGAGCCATATGTTGCAAAATCACCAAGAAGTGCTTATCTGAACTAT
AGGGATCTTGATTTTGGAACAAATTCAGAGGACTACAGTTATTCCAAGGCTAAAATATGG
GGTGAAAAGTATTTTAGGGGCAACTTTGAGAGATTGGCTAAAGTGAAGAGTGAAGTGGAT
CCCAAAAATTTCTTCAGAAATGAACAAAGCATTCCACCTTATCACACTGATAGCTGA