Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057523
CDS Infomation

pacid=37425391 polypeptide=PGSC0003DMP400038712 locus=PGSC0003DMG400022343 ID=PGSC0003DMT400057523.v4.03 annot-version=v4.03
Sequence

ATGGGAAACTTTCAACTTCTCTTTGTTCTTATATTATCATTCTTTTTGTCACAATTTTAT
GCCCAAGAATCCTTTCTCCACTGTATTTCTAGTCAATTTTCTGAAAGTAACATCACAGGA
GTACTTATCTATGCTCCAAAATCACCAGCATATTCATCGATTATCGAACATGCCCAGAAA
AATCCAAGATGGTTGAATTCTTCATCAGCACATCCGCTTTTAATTATTGTCCCTCGTAAA
GAAAATGAACTTAAGCCTGTCATTCTTTGCAGCAAAAAGTTTGACCTGCAAATTAGAGTG
TTAGGTGGTGGTCATGACTATGAAGGTCTCTCTTTTCGTGCTGAATCGCGATTTATCATG
ATTGATATGAGTAATCTTAATGAGATCGATATTGATTTAGAGGAAGAAGTGGCCTGGATT
CAAGCAGGGGCAACATTGGGACAATTATACTATGAAATTGCAAAGAAAAGCAGAGTACAT
GCATTTCCAGGAGGTATATGTTATACTACTGGCAGTGGTGGACTAATTAGTGGTGGAGGA
TTAGGTTCTTTGATGAGGAAATTCGGGCTTGCAGCAGATAATGTTGTCGATGCTCGTGTA
ATGGATGTTAATGGAAGAATTCTTGACAGAAAATCAATGGGAGAAGACTTTTTTTGGGCC
ATAAGAGGAGGTGGAGGTTCAAGTTTTGGGATCATTCTTGCTTGGAAACTCAAGCTGGTT
CATGTCCCTGAGAAGGTTTCTGTTTTCAGGGTTCATCGAATGCTCGAGGGAAATGCTATA
AATCTCCTCCAGCAATGGCAACATACATCATATTTACTACCTAAAGAGTTCTTCCTCAGA
ATGATAATGCAAAATGATGGAGAAAGAAACGAAAAGAAAGTCAAAGTCACATTTGAAGGA
CTATTTCTTGGGACAGTTGATGAGTTAATTCCTATTGTTAGTGATAAATTTCCGGAGTTT
AATTTGGAAATCAAAGATTTCTTCCAAGAACCAGTGATAAATTGCACTGAGAGACCTTGC
TTGAAGAAAGAATGTCATGAAGTTCCCTGGATCGGGTCGGTCTTGTTTTTGTACAACAAA
GAAGTTGATGAATCACTTGAGGTCCTTTTGGATAACAGTGTTCCTGTATATAAAAATTAC
TTCAAGGGAACATCTGATTTTGTGAAGACTCCGATTCCTGATAAGGGTTGGAAAATGATT
GAAAGATTGTTTCTTGAAGAGGACAGGCCTATGATAATAGTAGAACCATTGAGTGGAAGG
ATAGATGAATTTTCAGAATCTGAACTTCCTTTCCCTCACAGAAAGGGAAATTTGTACAAC
ATTCAGCACTTAGTGAATTGGAACGATAACAGTGAGAACGTATCGAGCAAAAAGATTGGA
TGGATGAGAAAATTTTACAAGGAAATGGAGCCATTTGTTGCCAATTCTCCCAGGACTGCC
TATACCAATTACAGGGATCTTGATTTTGGGACTAACCAAGAAGACTATAGCTATTCGAAG
GCCAAAATCTGGGGTGAGAAGTATTTCAAAGGCAACTTTGAGAGGTTAGCTAAAGTGAAG
AGTATGGTTGATCCGGAGAACTTTTTCAGATACCAGCAAAGCATTCCACCTTTTGCTACT
CCAGGACTGATGAATTTAATCGAAGAAGCATGGCCGAGCACTTACATTCCATCCGAATTA
CAGGTATTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038712
PEP Infomation

pacid=37425391 transcript=PGSC0003DMT400057523 locus=PGSC0003DMG400022343 ID=PGSC0003DMT400057523.v4.03 annot-version=v4.03
Sequence

MGNFQLLFVLILSFFLSQFYAQESFLHCISSQFSESNITGVLIYAPKSPAYSSIIEHAQK
NPRWLNSSSAHPLLIIVPRKENELKPVILCSKKFDLQIRVLGGGHDYEGLSFRAESRFIM
IDMSNLNEIDIDLEEEVAWIQAGATLGQLYYEIAKKSRVHAFPGGICYTTGSGGLISGGG
LGSLMRKFGLAADNVVDARVMDVNGRILDRKSMGEDFFWAIRGGGGSSFGIILAWKLKLV
HVPEKVSVFRVHRMLEGNAINLLQQWQHTSYLLPKEFFLRMIMQNDGERNEKKVKVTFEG
LFLGTVDELIPIVSDKFPEFNLEIKDFFQEPVINCTERPCLKKECHEVPWIGSVLFLYNK
EVDESLEVLLDNSVPVYKNYFKGTSDFVKTPIPDKGWKMIERLFLEEDRPMIIVEPLSGR
IDEFSESELPFPHRKGNLYNIQHLVNWNDNSENVSSKKIGWMRKFYKEMEPFVANSPRTA
YTNYRDLDFGTNQEDYSYSKAKIWGEKYFKGNFERLAKVKSMVDPENFFRYQQSIPPFAT
PGLMNLIEEAWPSTYIPSELQVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400057523
Transcript Infomation

pacid=37425391 locus=PGSC0003DMG400022343 ID=PGSC0003DMT400057523.v4.03 annot-version=v4.03
Sequence

ATGGGAAACTTTCAACTTCTCTTTGTTCTTATATTATCATTCTTTTTGTCACAATTTTAT
GCCCAAGAATCCTTTCTCCACTGTATTTCTAGTCAATTTTCTGAAAGTAACATCACAGGA
GTACTTATCTATGCTCCAAAATCACCAGCATATTCATCGATTATCGAACATGCCCAGAAA
AATCCAAGATGGTTGAATTCTTCATCAGCACATCCGCTTTTAATTATTGTCCCTCGTAAA
GAAAATGAACTTAAGCCTGTCATTCTTTGCAGCAAAAAGTTTGACCTGCAAATTAGAGTG
TTAGGTGGTGGTCATGACTATGAAGGTCTCTCTTTTCGTGCTGAATCGCGATTTATCATG
ATTGATATGAGTAATCTTAATGAGATCGATATTGATTTAGAGGAAGAAGTGGCCTGGATT
CAAGCAGGGGCAACATTGGGACAATTATACTATGAAATTGCAAAGAAAAGCAGAGTACAT
GCATTTCCAGGAGGTATATGTTATACTACTGGCAGTGGTGGACTAATTAGTGGTGGAGGA
TTAGGTTCTTTGATGAGGAAATTCGGGCTTGCAGCAGATAATGTTGTCGATGCTCGTGTA
ATGGATGTTAATGGAAGAATTCTTGACAGAAAATCAATGGGAGAAGACTTTTTTTGGGCC
ATAAGAGGAGGTGGAGGTTCAAGTTTTGGGATCATTCTTGCTTGGAAACTCAAGCTGGTT
CATGTCCCTGAGAAGGTTTCTGTTTTCAGGGTTCATCGAATGCTCGAGGGAAATGCTATA
AATCTCCTCCAGCAATGGCAACATACATCATATTTACTACCTAAAGAGTTCTTCCTCAGA
ATGATAATGCAAAATGATGGAGAAAGAAACGAAAAGAAAGTCAAAGTCACATTTGAAGGA
CTATTTCTTGGGACAGTTGATGAGTTAATTCCTATTGTTAGTGATAAATTTCCGGAGTTT
AATTTGGAAATCAAAGATTTCTTCCAAGAACCAGTGATAAATTGCACTGAGAGACCTTGC
TTGAAGAAAGAATGTCATGAAGTTCCCTGGATCGGGTCGGTCTTGTTTTTGTACAACAAA
GAAGTTGATGAATCACTTGAGGTCCTTTTGGATAACAGTGTTCCTGTATATAAAAATTAC
TTCAAGGGAACATCTGATTTTGTGAAGACTCCGATTCCTGATAAGGGTTGGAAAATGATT
GAAAGATTGTTTCTTGAAGAGGACAGGCCTATGATAATAGTAGAACCATTGAGTGGAAGG
ATAGATGAATTTTCAGAATCTGAACTTCCTTTCCCTCACAGAAAGGGAAATTTGTACAAC
ATTCAGCACTTAGTGAATTGGAACGATAACAGTGAGAACGTATCGAGCAAAAAGATTGGA
TGGATGAGAAAATTTTACAAGGAAATGGAGCCATTTGTTGCCAATTCTCCCAGGACTGCC
TATACCAATTACAGGGATCTTGATTTTGGGACTAACCAAGAAGACTATAGCTATTCGAAG
GCCAAAATCTGGGGTGAGAAGTATTTCAAAGGCAACTTTGAGAGGTTAGCTAAAGTGAAG
AGTATGGTTGATCCGGAGAACTTTTTCAGATACCAGCAAAGCATTCCACCTTTTGCTACT
CCAGGACTGATGAATTTAATCGAAGAAGCATGGCCGAGCACTTACATTCCATCCGAATTA
CAGGTATTCTGA