Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057521
CDS Infomation

pacid=37428490 polypeptide=PGSC0003DMP400038710 locus=PGSC0003DMG400022341 ID=PGSC0003DMT400057521.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTCGTTTGAGCCATTTGAGCCTTGTAGTGAGCCTTGTGGCACTTGCACTTGCA
GGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAATAACGGATCTCCAGAT
TTTGATTTTTTGGAAACAGGCGCAGTCAGTATTTTAACTTTGAATAATGAGAAGATAAAT
TCGGACAAAGATAATTTGAGTCAGCAATTAACTCAGGAGTCATGCGTTTTCTCAGCTGTG
AAGGGAGTTGTGGACAGTGCCATTGATAATGAAACGCGCGTGGGAGCTTCTCTCATTCGT
CTCCATTTCCATGACTGCTTTGTTGATGGTTGTGATGGAGGTATTCTGCTTGATGATATT
AATGGAACATTCACCGGGGAACAAACCTCACCACCCAACAACAACTCAGTCAGAGGCTTT
GAAGTGATAGCACAAGCTAAACAAAGTGTAATAGATACATGCCCCAACATATCTGTATCT
TGTGCTGACATTTTAGCTATCGCTGCTCGTGATTCTCTTGCTAAATTAGGAGGACAAACT
TATACCGTTGCACTAGGGAGAAGCGATGGTACAGCGGCCAATTTTACTGGTGCTTTAACT
CAACTTCCAGCTCCATCCGACAACCTAACTGTTCAAATACAGAAATTCAGCGACAAAAAT
TTCACTGTCCGTGAAATGGTCGCACTAGCTGGCGCGCACACGGTGGGTTTCGCCAGGTGT
GCCACCGTGTGCGTTAGCACCAACGTTAATCCTGCCGCACAACTCCAATGCAACTGCTCT
GCCACGCTAACTGATTCAGATTTGCAACAATTGGATACAACTCCTGCTGTTTTCGACAAA
GATTACTACGATAACTTAAATAACAACCAGGGGATAATGTTCTCGGATCAAGTTTTGACA
GGGAATACCACAACTGCTGATTTTGTAACGACTTATAGCAACAATGTTAGTGTTTTCCTT
GAAGATTTTGCTGCTGCTATGATCAAGATGGGGAACTTGCCTACCTCCGCGGGCGCTCAA
TTGGAAATTCGCGATGTTTGTAGCAGGGTTAATCCCACTTCTGTGGCATCTATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038710
PEP Infomation

pacid=37428490 transcript=PGSC0003DMT400057521 locus=PGSC0003DMG400022341 ID=PGSC0003DMT400057521.v4.03 annot-version=v4.03
Sequence

MGFRLSHLSLVVSLVALALAGVAIYRNTYEAIIMNNGSPDFDFLETGAVSILTLNNEKIN
SDKDNLSQQLTQESCVFSAVKGVVDSAIDNETRVGASLIRLHFHDCFVDGCDGGILLDDI
NGTFTGEQTSPPNNNSVRGFEVIAQAKQSVIDTCPNISVSCADILAIAARDSLAKLGGQT
YTVALGRSDGTAANFTGALTQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC
ATVCVSTNVNPAAQLQCNCSATLTDSDLQQLDTTPAVFDKDYYDNLNNNQGIMFSDQVLT
GNTTTADFVTTYSNNVSVFLEDFAAAMIKMGNLPTSAGAQLEIRDVCSRVNPTSVASM*

Transcript Sequence

Transcript ID

PGSC0003DMT400057521
Transcript Infomation

pacid=37428490 locus=PGSC0003DMG400022341 ID=PGSC0003DMT400057521.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTCGTTTGAGCCATTTGAGCCTTGTAGTGAGCCTTGTGGCACTTGCACTTGCA
GGTGTTGCTATTTATAGAAATACTTATGAAGCCATCATCATGAATAACGGATCTCCAGAT
TTTGATTTTTTGGAAACAGGCGCAGTCAGTATTTTAACTTTGAATAATGAGAAGATAAAT
TCGGACAAAGATAATTTGAGTCAGCAATTAACTCAGGAGTCATGCGTTTTCTCAGCTGTG
AAGGGAGTTGTGGACAGTGCCATTGATAATGAAACGCGCGTGGGAGCTTCTCTCATTCGT
CTCCATTTCCATGACTGCTTTGTTGATGGTTGTGATGGAGGTATTCTGCTTGATGATATT
AATGGAACATTCACCGGGGAACAAACCTCACCACCCAACAACAACTCAGTCAGAGGCTTT
GAAGTGATAGCACAAGCTAAACAAAGTGTAATAGATACATGCCCCAACATATCTGTATCT
TGTGCTGACATTTTAGCTATCGCTGCTCGTGATTCTCTTGCTAAATTAGGAGGACAAACT
TATACCGTTGCACTAGGGAGAAGCGATGGTACAGCGGCCAATTTTACTGGTGCTTTAACT
CAACTTCCAGCTCCATCCGACAACCTAACTGTTCAAATACAGAAATTCAGCGACAAAAAT
TTCACTGTCCGTGAAATGGTCGCACTAGCTGGCGCGCACACGGTGGGTTTCGCCAGGTGT
GCCACCGTGTGCGTTAGCACCAACGTTAATCCTGCCGCACAACTCCAATGCAACTGCTCT
GCCACGCTAACTGATTCAGATTTGCAACAATTGGATACAACTCCTGCTGTTTTCGACAAA
GATTACTACGATAACTTAAATAACAACCAGGGGATAATGTTCTCGGATCAAGTTTTGACA
GGGAATACCACAACTGCTGATTTTGTAACGACTTATAGCAACAATGTTAGTGTTTTCCTT
GAAGATTTTGCTGCTGCTATGATCAAGATGGGGAACTTGCCTACCTCCGCGGGCGCTCAA
TTGGAAATTCGCGATGTTTGTAGCAGGGTTAATCCCACTTCTGTGGCATCTATGTGA