Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057491
CDS Infomation

pacid=37431954 polypeptide=PGSC0003DMP400038691 locus=PGSC0003DMG400022322 ID=PGSC0003DMT400057491.v4.03 annot-version=v4.03
Sequence

ATGGGTTACAAAAAAGGAGGAAGATTCATGCCGGAAGAGGAGAACGGCGTCGGTGCTACA
CTGAGAGATGCTTTGTTATTTACTACTATGTGTATTATTGGGCTACCGGTTGATGTTTAT
ATCAAAGATGGTGGTGTTTATTCGGGTATTTTTCACACTGCTTGCGTAGATGATGAATAT
GCTATTGTTTTGAAGAGGGCAAAGATGATTAAGAAGGGTAGTCGAGAGGCGAATGTAGCA
CGTGGAAGTTTGATAGAGACACTCGTAATTTTGTCTGAAGATCTTGTCCAAGTTGTCGCA
AAGGGGGTTATGCTATCTGCTGATAGTATTCAAGGACATTTAGATGGGGATAATGCAAGA
ACTGTTTGTAGCAATATAACTTATCCTGAATACACCAAAAAGGAGATGAAAGCAACAAAG
TTCAAGTTGTCTACCGTGGATGGAGAGAAAGCTAGTAAAGAAAGATATGTGCGAAATGGC
TTAATCAATAAGCAAAGTGATCGCAGAGAGGGCCATGAGTCTCTAAGGGAGAGAACTATC
CTTGAAGTTCAAGGCTCAAGCTCAAATGTGGATGTTTCTGTTACGCAAGCTCAAGCAAAT
GCCCTCGAGAATGTTACCTTCATAAAAAACTTGGAGTTGTCATCAAATGGAATATCTCAT
GGTAGTCCTCCTCTTTCCTCAACCAAACTTGATGATCGGAATAATGATAGACACAGTCAT
GAGCAGCAGACTCTAGGAAAAACTCCTTGTTTGGGCCCTACTTCCTCTGGTGCTCCAATC
ACTTCAGTCTCATGCGTCAGCTCATCATCAGCTCCAGCTGATTTGGTGCCTTCACGAGGT
TCAATTCATAATGCTAGTACAAAGGAATCTAAGCTCAACCCTGGGGCAAAGATATTTTCT
CCATCAACTTTGCAGCATAGAACTGTTACACCTCCTGTGGTGCCAACGATGGCTTACGTG
CCAGATTCCTGTCCTGTAGTACCTGTTGTTACAGCAGAGCCTGAAGTTGGAATTACCCCC
TTTGCTCCTCATCCATCTGTGCCTGTCAAGTTTGTCCCATATAATAATTTGGCAGCTGGA
AATGGTGGCTTAGATGTACAGTATGCTCAACCGACAATTGGATACATGGGAAGCAGGACT
CAGCCGGCAAGGTATGGTAGTCAGTATCATCACCTTCAGGCTGCAACTGGTTATATGCAT
CCAAATTCTCAAAATGTTATGGTTGGACGGTTGGGACCACTTGTTTATATGCATCCTGTT
TCTCATGACATTGTTCAGAGTGCAGCGGGGTTCCCTCAAGTATCCACACGTCCTCTATTA
ATTCCACATCAGGTCCATCCTCCTAAGCATCAAGGAAGTACAGCACCACAAGCACTGCAG
TTGTATATGACTCCCCCAGTCATAACAGGGCTACAACAACCATTCACTATACCAAGCATT
CCTATTACACAGGCGTCTTTTCCTGTTATGCGGCCTATGCAATTCCCAGTACCTAATGGT
TTTGTGCCTAACAAGTTTGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038691
PEP Infomation

pacid=37431954 transcript=PGSC0003DMT400057491 locus=PGSC0003DMG400022322 ID=PGSC0003DMT400057491.v4.03 annot-version=v4.03
Sequence

MGYKKGGRFMPEEENGVGATLRDALLFTTMCIIGLPVDVYIKDGGVYSGIFHTACVDDEY
AIVLKRAKMIKKGSREANVARGSLIETLVILSEDLVQVVAKGVMLSADSIQGHLDGDNAR
TVCSNITYPEYTKKEMKATKFKLSTVDGEKASKERYVRNGLINKQSDRREGHESLRERTI
LEVQGSSSNVDVSVTQAQANALENVTFIKNLELSSNGISHGSPPLSSTKLDDRNNDRHSH
EQQTLGKTPCLGPTSSGAPITSVSCVSSSSAPADLVPSRGSIHNASTKESKLNPGAKIFS
PSTLQHRTVTPPVVPTMAYVPDSCPVVPVVTAEPEVGITPFAPHPSVPVKFVPYNNLAAG
NGGLDVQYAQPTIGYMGSRTQPARYGSQYHHLQAATGYMHPNSQNVMVGRLGPLVYMHPV
SHDIVQSAAGFPQVSTRPLLIPHQVHPPKHQGSTAPQALQLYMTPPVITGLQQPFTIPSI
PITQASFPVMRPMQFPVPNGFVPNKFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400057491
Transcript Infomation

pacid=37431954 locus=PGSC0003DMG400022322 ID=PGSC0003DMT400057491.v4.03 annot-version=v4.03
Sequence

ATGGGTTACAAAAAAGGAGGAAGATTCATGCCGGAAGAGGAGAACGGCGTCGGTGCTACA
CTGAGAGATGCTTTGTTATTTACTACTATGTGTATTATTGGGCTACCGGTTGATGTTTAT
ATCAAAGATGGTGGTGTTTATTCGGGTATTTTTCACACTGCTTGCGTAGATGATGAATAT
GCTATTGTTTTGAAGAGGGCAAAGATGATTAAGAAGGGTAGTCGAGAGGCGAATGTAGCA
CGTGGAAGTTTGATAGAGACACTCGTAATTTTGTCTGAAGATCTTGTCCAAGTTGTCGCA
AAGGGGGTTATGCTATCTGCTGATAGTATTCAAGGACATTTAGATGGGGATAATGCAAGA
ACTGTTTGTAGCAATATAACTTATCCTGAATACACCAAAAAGGAGATGAAAGCAACAAAG
TTCAAGTTGTCTACCGTGGATGGAGAGAAAGCTAGTAAAGAAAGATATGTGCGAAATGGC
TTAATCAATAAGCAAAGTGATCGCAGAGAGGGCCATGAGTCTCTAAGGGAGAGAACTATC
CTTGAAGTTCAAGGCTCAAGCTCAAATGTGGATGTTTCTGTTACGCAAGCTCAAGCAAAT
GCCCTCGAGAATGTTACCTTCATAAAAAACTTGGAGTTGTCATCAAATGGAATATCTCAT
GGTAGTCCTCCTCTTTCCTCAACCAAACTTGATGATCGGAATAATGATAGACACAGTCAT
GAGCAGCAGACTCTAGGAAAAACTCCTTGTTTGGGCCCTACTTCCTCTGGTGCTCCAATC
ACTTCAGTCTCATGCGTCAGCTCATCATCAGCTCCAGCTGATTTGGTGCCTTCACGAGGT
TCAATTCATAATGCTAGTACAAAGGAATCTAAGCTCAACCCTGGGGCAAAGATATTTTCT
CCATCAACTTTGCAGCATAGAACTGTTACACCTCCTGTGGTGCCAACGATGGCTTACGTG
CCAGATTCCTGTCCTGTAGTACCTGTTGTTACAGCAGAGCCTGAAGTTGGAATTACCCCC
TTTGCTCCTCATCCATCTGTGCCTGTCAAGTTTGTCCCATATAATAATTTGGCAGCTGGA
AATGGTGGCTTAGATGTACAGTATGCTCAACCGACAATTGGATACATGGGAAGCAGGACT
CAGCCGGCAAGGTATGGTAGTCAGTATCATCACCTTCAGGCTGCAACTGGTTATATGCAT
CCAAATTCTCAAAATGTTATGGTTGGACGGTTGGGACCACTTGTTTATATGCATCCTGTT
TCTCATGACATTGTTCAGAGTGCAGCGGGGTTCCCTCAAGTATCCACACGTCCTCTATTA
ATTCCACATCAGGTCCATCCTCCTAAGCATCAAGGAAGTACAGCACCACAAGCACTGCAG
TTGTATATGACTCCCCCAGTCATAACAGGGCTACAACAACCATTCACTATACCAAGCATT
CCTATTACACAGGCGTCTTTTCCTGTTATGCGGCCTATGCAATTCCCAGTACCTAATGGT
TTTGTGCCTAACAAGTTTGTGTGA