Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057488
CDS Infomation

pacid=37434259 polypeptide=PGSC0003DMP400038688 locus=PGSC0003DMG400022320 ID=PGSC0003DMT400057488.v4.03 annot-version=v4.03
Sequence

ATGAAGGTCACTGCAAACAATAGAGCTGAGCTTCCAGCAATTGCATCATTCAAACTAGTG
AACCCTTTACCCGATTCAGATCTTTTACAAAACCCCTTTTGCTCTAGGAAACCGCCTCGC
CGGAAAATCAAGAACTCCGGTGGCGCCGGAGTGAGGTTACGGAGAGATATTCCCGGTGGG
AAAAGGAGCAGACCTAATACCCCTTTACTACGATGGAAGTATAACGAGGATGTAAATGAC
AATGCTTGTACTTGGGAGGACAAATCGACGGTGGAGCTTGGTCGGAAATCTGGCCGGAAA
GTTAGAAATTTGGTTTCTGCTAGGAAGTTAGCTGCCGGACTATGGAGGCTTCAGTTGCCG
GAAGTTCCTAATATTCCAGCTCAAAAGTTACCTCAGGCTGGTCATATTGATCTACCCTTT
TTCAACCATCATCATATTAAAGAGAATGATTCTCACGTGCAGGCTGGTCATATTGATCTA
CCCTTTTTCGACCATCATCATATTAAAGAGAATGATTCTCACATTGATGATTCAGTGCAG
AGTCCACGATCTGTCTCCGGTCCAAGATATGGTCTTTATCACAAGCTAGAGCCCTCATTT
CAATATCCAAACTCTGCTATGGAGGGGGCAACAAAGTGGGATCCAGTTGGCTGGACAATA
GCTGAGGAAATAAAGGAGATTTACGGCCATCAGAAGGTTCCTAATAAACAGTCGAAGACT
GCTGCAATGATTTCCACCCTTGAGGCAGAATTAGAGCAGGCTCGCACCCGAATTCATCAA
CTTGAGATGGAGCGACGGTCTTCAAAAAAGAAACTCGAACTGTTTTTGAGAAAACTTAGT
GAAGAGAAAGCAGCCTGGAGAAGCCGAGAACACGAGAAAATTCGTGCAATTATAGATGAT
ATGAAAGCCGACTTGTCCAGAGAGAAGAGAAACCGACAGAGGCTGGAAACAGTCAACTCC
AAGTTAGTTAATGAATTGGCTGATGCCAAGTTATCAGCAAAGCGCTATTTTCAAGATTAC
GAAAAAGAAAGGAAGGGTAGAGAGTTGATAGAGGAAGTGTGTGAAGAATTAGCCAAGGAA
ATTGGAGAAGACAAGGCTGAAGTCGAGGCATTGAAGAGAGAATCTCATTCACTTAGGGAG
GAAGTAGATGAAGAAAGAAAGATGTTGCAGATGGCTGAGGTTTGGCGTGAGGAACGGGTT
CAGATGAAGCTAGTTGATGCTAAGGTGACACTGGAAGAGAAGTATTCCCAAATGAATAGA
CTAATTGCAGAGTTAGAGTCTTTCCTAGGTTCTAGAGGTATGAACCCCGACGAGGAAGTG
ATCAAACGAGCTGAGCAACTCAAACAGGAAGCTGCTTCGGTGAATATTCGTGATATCAGT
GAATTTACTTATGAACCTCCAAATCCAGATGATATATTCTCAGTGTTCGAGGACCTTAAT
TTTGTTGAAAATAATGAAAGGGAGGTTGAGCCATGTCCTGCATACAGTTCTGCTAGCCAT
CCCTCCAAAATTTGCACATTCAGTCCTGATGACGGTGCATACAATAAAGACAACTTCCTC
AGACATTCTCTTGCGTATAATCAGAGCGATTTAGAGGAAGAAGGAAGTGAATGGGAAACA
GTGAGCCATCTCGACGAGCAAGGTTCTAGTTATTCTGCTGAAGGAAGCGTCTGTTCTGTC
AACAAGAACTGCAGGCACAGCAATGCCTCAATGGAGATAAGTGATGTATATTCAGGGCAA
GGTCGACAACTTAAGAAGGTGTCGTCTATATCTAGGCTTTGGAAATCAAACGGAGACAAC
TACAAAAAGATATCAGTTGAAGGAATAAACGGGAGACTATCAAATGGAAGGCTATCGAAT
GATGCCACTTTATCTCCAGATTGTGGTTCTAGTAAAGGTGAATTCAGCCCTTCAGGGAGC
TCACTTGACTCGGGCAATCCACAAATAACACGAGGGATGAAAGGGTGCATTGATTGGCCG
CGTAACTCTCACAAGCACAGTTTAAAAGCAAAACTTCTGGAAGCAAGAATGGAGAGCCAA
AAGGTCCAGTTACGCCACGTCTTGAAACAGAAGATCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038688
PEP Infomation

pacid=37434259 transcript=PGSC0003DMT400057488 locus=PGSC0003DMG400022320 ID=PGSC0003DMT400057488.v4.03 annot-version=v4.03
Sequence

MKVTANNRAELPAIASFKLVNPLPDSDLLQNPFCSRKPPRRKIKNSGGAGVRLRRDIPGG
KRSRPNTPLLRWKYNEDVNDNACTWEDKSTVELGRKSGRKVRNLVSARKLAAGLWRLQLP
EVPNIPAQKLPQAGHIDLPFFNHHHIKENDSHVQAGHIDLPFFDHHHIKENDSHIDDSVQ
SPRSVSGPRYGLYHKLEPSFQYPNSAMEGATKWDPVGWTIAEEIKEIYGHQKVPNKQSKT
AAMISTLEAELEQARTRIHQLEMERRSSKKKLELFLRKLSEEKAAWRSREHEKIRAIIDD
MKADLSREKRNRQRLETVNSKLVNELADAKLSAKRYFQDYEKERKGRELIEEVCEELAKE
IGEDKAEVEALKRESHSLREEVDEERKMLQMAEVWREERVQMKLVDAKVTLEEKYSQMNR
LIAELESFLGSRGMNPDEEVIKRAEQLKQEAASVNIRDISEFTYEPPNPDDIFSVFEDLN
FVENNEREVEPCPAYSSASHPSKICTFSPDDGAYNKDNFLRHSLAYNQSDLEEEGSEWET
VSHLDEQGSSYSAEGSVCSVNKNCRHSNASMEISDVYSGQGRQLKKVSSISRLWKSNGDN
YKKISVEGINGRLSNGRLSNDATLSPDCGSSKGEFSPSGSSLDSGNPQITRGMKGCIDWP
RNSHKHSLKAKLLEARMESQKVQLRHVLKQKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057488
Transcript Infomation

pacid=37434259 locus=PGSC0003DMG400022320 ID=PGSC0003DMT400057488.v4.03 annot-version=v4.03
Sequence

ATGAAGGTCACTGCAAACAATAGAGCTGAGCTTCCAGCAATTGCATCATTCAAACTAGTG
AACCCTTTACCCGATTCAGATCTTTTACAAAACCCCTTTTGCTCTAGGAAACCGCCTCGC
CGGAAAATCAAGAACTCCGGTGGCGCCGGAGTGAGGTTACGGAGAGATATTCCCGGTGGG
AAAAGGAGCAGACCTAATACCCCTTTACTACGATGGAAGTATAACGAGGATGTAAATGAC
AATGCTTGTACTTGGGAGGACAAATCGACGGTGGAGCTTGGTCGGAAATCTGGCCGGAAA
GTTAGAAATTTGGTTTCTGCTAGGAAGTTAGCTGCCGGACTATGGAGGCTTCAGTTGCCG
GAAGTTCCTAATATTCCAGCTCAAAAGTTACCTCAGGCTGGTCATATTGATCTACCCTTT
TTCAACCATCATCATATTAAAGAGAATGATTCTCACGTGCAGGCTGGTCATATTGATCTA
CCCTTTTTCGACCATCATCATATTAAAGAGAATGATTCTCACATTGATGATTCAGTGCAG
AGTCCACGATCTGTCTCCGGTCCAAGATATGGTCTTTATCACAAGCTAGAGCCCTCATTT
CAATATCCAAACTCTGCTATGGAGGGGGCAACAAAGTGGGATCCAGTTGGCTGGACAATA
GCTGAGGAAATAAAGGAGATTTACGGCCATCAGAAGGTTCCTAATAAACAGTCGAAGACT
GCTGCAATGATTTCCACCCTTGAGGCAGAATTAGAGCAGGCTCGCACCCGAATTCATCAA
CTTGAGATGGAGCGACGGTCTTCAAAAAAGAAACTCGAACTGTTTTTGAGAAAACTTAGT
GAAGAGAAAGCAGCCTGGAGAAGCCGAGAACACGAGAAAATTCGTGCAATTATAGATGAT
ATGAAAGCCGACTTGTCCAGAGAGAAGAGAAACCGACAGAGGCTGGAAACAGTCAACTCC
AAGTTAGTTAATGAATTGGCTGATGCCAAGTTATCAGCAAAGCGCTATTTTCAAGATTAC
GAAAAAGAAAGGAAGGGTAGAGAGTTGATAGAGGAAGTGTGTGAAGAATTAGCCAAGGAA
ATTGGAGAAGACAAGGCTGAAGTCGAGGCATTGAAGAGAGAATCTCATTCACTTAGGGAG
GAAGTAGATGAAGAAAGAAAGATGTTGCAGATGGCTGAGGTTTGGCGTGAGGAACGGGTT
CAGATGAAGCTAGTTGATGCTAAGGTGACACTGGAAGAGAAGTATTCCCAAATGAATAGA
CTAATTGCAGAGTTAGAGTCTTTCCTAGGTTCTAGAGGTATGAACCCCGACGAGGAAGTG
ATCAAACGAGCTGAGCAACTCAAACAGGAAGCTGCTTCGGTGAATATTCGTGATATCAGT
GAATTTACTTATGAACCTCCAAATCCAGATGATATATTCTCAGTGTTCGAGGACCTTAAT
TTTGTTGAAAATAATGAAAGGGAGGTTGAGCCATGTCCTGCATACAGTTCTGCTAGCCAT
CCCTCCAAAATTTGCACATTCAGTCCTGATGACGGTGCATACAATAAAGACAACTTCCTC
AGACATTCTCTTGCGTATAATCAGAGCGATTTAGAGGAAGAAGGAAGTGAATGGGAAACA
GTGAGCCATCTCGACGAGCAAGGTTCTAGTTATTCTGCTGAAGGAAGCGTCTGTTCTGTC
AACAAGAACTGCAGGCACAGCAATGCCTCAATGGAGATAAGTGATGTATATTCAGGGCAA
GGTCGACAACTTAAGAAGGTGTCGTCTATATCTAGGCTTTGGAAATCAAACGGAGACAAC
TACAAAAAGATATCAGTTGAAGGAATAAACGGGAGACTATCAAATGGAAGGCTATCGAAT
GATGCCACTTTATCTCCAGATTGTGGTTCTAGTAAAGGTGAATTCAGCCCTTCAGGGAGC
TCACTTGACTCGGGCAATCCACAAATAACACGAGGGATGAAAGGGTGCATTGATTGGCCG
CGTAACTCTCACAAGCACAGTTTAAAAGCAAAACTTCTGGAAGCAAGAATGGAGAGCCAA
AAGGTCCAGTTACGCCACGTCTTGAAACAGAAGATCTAG