Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057478
CDS Infomation

pacid=37431104 polypeptide=PGSC0003DMP400038679 locus=PGSC0003DMG402022316 ID=PGSC0003DMT400057478.v4.03 annot-version=v4.03
Sequence

ATGGACAAAACAAAATCCCCTGAAGTCGTCGCCGGCGTAATTCACAACGCTTTTTTTCAA
GCATCTGTATTGGCTATTATGAAGAAAAAGCCCCCTAGCTTGGTGAGCTTGTGTCTTGGA
GTTATTGGTAGACATTTTGAGGATATCATTGAAGACCTCGCCGAGATAGCTGCTATTCCG
TCCACCATGAAGATGGCACTTGTGGCAATTGCAAGAAGGAGAAGGCTATTGAATGACGAT
GTCATTGTTGCATTGGCTGATAGCTCCTGGAAAATCCTGGACTTGTCTGGTTCGGAGGTT
TCTGATTTTGGCCTATCACAAGTGGTTAAAACTTGCAAACATCTGCAAGCAGTTGATATA
AGTCGCTGCAGCAAGCTCACATCAGTCAGTGTATCAGAACTCTTGCAGAACTGCCGGTCT
CTGGAAATACTGAGATGGGGAGGCTGCCCTCGGAGTGAGAACACAGCTCGTAGATGCCTC
CGTTTCTTGAAACCAATACTAGAGCATGTGGAAGGAGATTCTTGGGAGGAACTTGATACC
TTGGAAATAGCTCATGGTGCGACATCCTTGCGTTGGCTTTTATGGCCAAAAGTTGAAAAG
GAACAGCTGGAGATTTTGTCTGAAGAATGCCCACGAGTCATAGTAAATCCAAAGCCGTCG
CCACTCGGTTACAGGGGGATTGATATACCTAGAGAAGCAAGACTAGATGTATCATTAGAT
GATCCCATGGTTGAAGATATTGACCCCAAGATCTGGGCAGTTTCTGGAATTGTACCTAGA
ACATCACCATCATCAGTTTCAAGCTCAGAAGATTTGCCCATTGCAGAAAAGTTTAGACTT
GCATTTCTTGAGAGAGATACTAGACTAGCGCCAAAGCGAGCAAAGAATGCAAGACAACAC
CAACGACGTGCAGAAAAGGAATGGGTAACGATGAATAGTAGGGCAAAAGCACTAGCACTT
GCCTCACTGGCTAGCAAATCCCTTAACATCCGGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038679
PEP Infomation

pacid=37431104 transcript=PGSC0003DMT400057478 locus=PGSC0003DMG402022316 ID=PGSC0003DMT400057478.v4.03 annot-version=v4.03
Sequence

MDKTKSPEVVAGVIHNAFFQASVLAIMKKKPPSLVSLCLGVIGRHFEDIIEDLAEIAAIP
STMKMALVAIARRRRLLNDDVIVALADSSWKILDLSGSEVSDFGLSQVVKTCKHLQAVDI
SRCSKLTSVSVSELLQNCRSLEILRWGGCPRSENTARRCLRFLKPILEHVEGDSWEELDT
LEIAHGATSLRWLLWPKVEKEQLEILSEECPRVIVNPKPSPLGYRGIDIPREARLDVSLD
DPMVEDIDPKIWAVSGIVPRTSPSSVSSSEDLPIAEKFRLAFLERDTRLAPKRAKNARQH
QRRAEKEWVTMNSRAKALALASLASKSLNIRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400057478
Transcript Infomation

pacid=37431104 locus=PGSC0003DMG402022316 ID=PGSC0003DMT400057478.v4.03 annot-version=v4.03
Sequence

ATGGACAAAACAAAATCCCCTGAAGTCGTCGCCGGCGTAATTCACAACGCTTTTTTTCAA
GCATCTGTATTGGCTATTATGAAGAAAAAGCCCCCTAGCTTGGTGAGCTTGTGTCTTGGA
GTTATTGGTAGACATTTTGAGGATATCATTGAAGACCTCGCCGAGATAGCTGCTATTCCG
TCCACCATGAAGATGGCACTTGTGGCAATTGCAAGAAGGAGAAGGCTATTGAATGACGAT
GTCATTGTTGCATTGGCTGATAGCTCCTGGAAAATCCTGGACTTGTCTGGTTCGGAGGTT
TCTGATTTTGGCCTATCACAAGTGGTTAAAACTTGCAAACATCTGCAAGCAGTTGATATA
AGTCGCTGCAGCAAGCTCACATCAGTCAGTGTATCAGAACTCTTGCAGAACTGCCGGTCT
CTGGAAATACTGAGATGGGGAGGCTGCCCTCGGAGTGAGAACACAGCTCGTAGATGCCTC
CGTTTCTTGAAACCAATACTAGAGCATGTGGAAGGAGATTCTTGGGAGGAACTTGATACC
TTGGAAATAGCTCATGGTGCGACATCCTTGCGTTGGCTTTTATGGCCAAAAGTTGAAAAG
GAACAGCTGGAGATTTTGTCTGAAGAATGCCCACGAGTCATAGTAAATCCAAAGCCGTCG
CCACTCGGTTACAGGGGGATTGATATACCTAGAGAAGCAAGACTAGATGTATCATTAGAT
GATCCCATGGTTGAAGATATTGACCCCAAGATCTGGGCAGTTTCTGGAATTGTACCTAGA
ACATCACCATCATCAGTTTCAAGCTCAGAAGATTTGCCCATTGCAGAAAAGTTTAGACTT
GCATTTCTTGAGAGAGATACTAGACTAGCGCCAAAGCGAGCAAAGAATGCAAGACAACAC
CAACGACGTGCAGAAAAGGAATGGGTAACGATGAATAGTAGGGCAAAAGCACTAGCACTT
GCCTCACTGGCTAGCAAATCCCTTAACATCCGGAATTGA