Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057460
CDS Infomation

pacid=37431435 polypeptide=PGSC0003DMP400038662 locus=PGSC0003DMG400022311 ID=PGSC0003DMT400057460.v4.03 annot-version=v4.03
Sequence

ATGGAGGCGTCATTCGTATCTAGAGCAAAGACGGCCTTCCATTCTGCGGCAGCTAAAGCG
GAGAAAGTTTTCACTGATATCAAAAAATCTGATCTCATCAACGATCCAGATTCGGATAAA
CAATCGCCGGCGACGTCAACGAACGAGATTTCAGACGATAAGGACGAGTCTAAGGACGAA
AAGAATTCAAGGCGGAGGCCTCCACCAATAAAGGCCAAGCAGGACTGGCAGGAGAGGTTT
AAGAACATAAGAATAGGTAAAAGAGGAACTGAGGGCACTGACAAAGCTGAAAGTCCAGGA
ATGGCATATGCAATTTTTGATGAAAATATTTGCTTCATGAGTGAGAGAGCAATACCTGAT
TCGAAGGACTCTGAATCAGGTTTGAGGATGGAAGAGTCAAAACATCGGGACAGAGATGTC
ATTCCTCCGGCCTCTGTCATGAAGCAATTAGCTGTAGCTGTCGAGGCTGGAAAGAGGTGT
ATTACAATGAAAGACTTCCTAGCTTCATCCCGAGGTTCCTCACCCATCATGGAGAGGGCT
AGCTTAAGCTTGTCAGCAGTGAAATCATTAATGCTACGTGAAAAAGATGACAAATTTGCG
GGTGAATTTGGTGCGGATGACAAAGTCTTGTCTCTTATCAATTTACTGCTAGATGCAGAA
GGACATTTTCCTGGAAGGAAAGTAGATTCTGCAAATGCTTCATCTTTGCCTAAGGATCTT
CATGGTGCTCCTCCTGAAAGTTTTATCGTTAATCTTGCTGATGTAACTGGACATATGAAA
TCACTGCGTAAAATGGCATTATTATGGTGCAAAATTGTTGCTGAATTGAGGAGGCTGTGG
TCTGAAGGACAATATATCCCTGGCATTCCTCCAGATCAAATTCCGGACCTAAATTCATGT
CTTTTGTATCAGCAACTCCAGGTTATTAACCGTTGCATTTCCAGGAAAAAGCGACGCATT
GCAGCCGCTGAATCGTTGGATTCGGTTGTCAGGCTAGGAAGTTCAAATACAGATGTTCTT
GCTGATGACGGCACCCTTCCTGCAACTCCCGTCTTGTATGCTAAAGTTAACACAGGAGAA
TTAATTCTTCGGCTAGGAGTGGACAGCCAATCTGATCTAACAATGCTAGAAACGGGTGAA
CCTATATATACGCCAGTAATGCAGGAAGAACCCTTGCTAACGGAAGATCTAATCAAAGAA
ACAGAGGAGCTGGTGCTCCGAACAGGGAGTCTTGGAGCTGGGTGCTCTCAACTCCTGTCT
GACATGCAGGCTTTCAAGGCAGCAAACCCTGGGTGTATATTAGAAGATTTCGTTAGATGG
CATTCTCCTCCTGATTGGATGGAATGTGATACAAATGATGGAATTAATGAAACCCTTGAT
ACTAATGACTCATTGTCTGGAAGAGGCCAACTGAGTACTCGAATGCAGAAAGAAGGCAAC
TTGTGGCGCGAACTATGGGAAACCTCAAAGCCAGTGCCGGCTGTTAGACAAACTCCTCTC
TTTGATGAGGATTTGGCAGTGGAAAGTATTCTGGATAATTTAGAGGATATATCTCCACAT
GAGCTTTTCAAGCAGCTGTTTATATCTCTTTTGGGATCAGGGTTTGTAACTGCTGAGGCC
ATCCTCTCCAACAATTCAAATTTAGCGAAGCTGTTTAGTGATTGTAAAGAATATGTCATT
GTCACCTGTGAAAGAAGCAACTGGGTTGACAAAGTTGATGAATTGTGCCAGGTCTACGAG
ACTGTTGAGACAATGGTACTCAGTCCAGATGAAGTTATAAGGATCACCTTTCAACCTGAA
GAACCTTCAGCTGCACCCCCGAATGAACTAAAACGTCGATTCAAAAGGCTTAGCCTCATA
TTCAGAAACAAGGATAAGCTATCACCGCGAGACCAGAAGAACCAGGAGGAGAGTCCATTA
CGCCAACCATTCTCATCCATGTTTTCAAAGAAACCTCCTAAGCCCGACAGTTCATCTCCA
GATAAACCTGTTACTTCCGTCGAAAATGACTGGACAATTGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400038662
PEP Infomation

pacid=37431435 transcript=PGSC0003DMT400057460 locus=PGSC0003DMG400022311 ID=PGSC0003DMT400057460.v4.03 annot-version=v4.03
Sequence

MEASFVSRAKTAFHSAAAKAEKVFTDIKKSDLINDPDSDKQSPATSTNEISDDKDESKDE
KNSRRRPPPIKAKQDWQERFKNIRIGKRGTEGTDKAESPGMAYAIFDENICFMSERAIPD
SKDSESGLRMEESKHRDRDVIPPASVMKQLAVAVEAGKRCITMKDFLASSRGSSPIMERA
SLSLSAVKSLMLREKDDKFAGEFGADDKVLSLINLLLDAEGHFPGRKVDSANASSLPKDL
HGAPPESFIVNLADVTGHMKSLRKMALLWCKIVAELRRLWSEGQYIPGIPPDQIPDLNSC
LLYQQLQVINRCISRKKRRIAAAESLDSVVRLGSSNTDVLADDGTLPATPVLYAKVNTGE
LILRLGVDSQSDLTMLETGEPIYTPVMQEEPLLTEDLIKETEELVLRTGSLGAGCSQLLS
DMQAFKAANPGCILEDFVRWHSPPDWMECDTNDGINETLDTNDSLSGRGQLSTRMQKEGN
LWRELWETSKPVPAVRQTPLFDEDLAVESILDNLEDISPHELFKQLFISLLGSGFVTAEA
ILSNNSNLAKLFSDCKEYVIVTCERSNWVDKVDELCQVYETVETMVLSPDEVIRITFQPE
EPSAAPPNELKRRFKRLSLIFRNKDKLSPRDQKNQEESPLRQPFSSMFSKKPPKPDSSSP
DKPVTSVENDWTIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400057460
Transcript Infomation

pacid=37431435 locus=PGSC0003DMG400022311 ID=PGSC0003DMT400057460.v4.03 annot-version=v4.03
Sequence

ATGGAGGCGTCATTCGTATCTAGAGCAAAGACGGCCTTCCATTCTGCGGCAGCTAAAGCG
GAGAAAGTTTTCACTGATATCAAAAAATCTGATCTCATCAACGATCCAGATTCGGATAAA
CAATCGCCGGCGACGTCAACGAACGAGATTTCAGACGATAAGGACGAGTCTAAGGACGAA
AAGAATTCAAGGCGGAGGCCTCCACCAATAAAGGCCAAGCAGGACTGGCAGGAGAGGTTT
AAGAACATAAGAATAGGTAAAAGAGGAACTGAGGGCACTGACAAAGCTGAAAGTCCAGGA
ATGGCATATGCAATTTTTGATGAAAATATTTGCTTCATGAGTGAGAGAGCAATACCTGAT
TCGAAGGACTCTGAATCAGGTTTGAGGATGGAAGAGTCAAAACATCGGGACAGAGATGTC
ATTCCTCCGGCCTCTGTCATGAAGCAATTAGCTGTAGCTGTCGAGGCTGGAAAGAGGTGT
ATTACAATGAAAGACTTCCTAGCTTCATCCCGAGGTTCCTCACCCATCATGGAGAGGGCT
AGCTTAAGCTTGTCAGCAGTGAAATCATTAATGCTACGTGAAAAAGATGACAAATTTGCG
GGTGAATTTGGTGCGGATGACAAAGTCTTGTCTCTTATCAATTTACTGCTAGATGCAGAA
GGACATTTTCCTGGAAGGAAAGTAGATTCTGCAAATGCTTCATCTTTGCCTAAGGATCTT
CATGGTGCTCCTCCTGAAAGTTTTATCGTTAATCTTGCTGATGTAACTGGACATATGAAA
TCACTGCGTAAAATGGCATTATTATGGTGCAAAATTGTTGCTGAATTGAGGAGGCTGTGG
TCTGAAGGACAATATATCCCTGGCATTCCTCCAGATCAAATTCCGGACCTAAATTCATGT
CTTTTGTATCAGCAACTCCAGGTTATTAACCGTTGCATTTCCAGGAAAAAGCGACGCATT
GCAGCCGCTGAATCGTTGGATTCGGTTGTCAGGCTAGGAAGTTCAAATACAGATGTTCTT
GCTGATGACGGCACCCTTCCTGCAACTCCCGTCTTGTATGCTAAAGTTAACACAGGAGAA
TTAATTCTTCGGCTAGGAGTGGACAGCCAATCTGATCTAACAATGCTAGAAACGGGTGAA
CCTATATATACGCCAGTAATGCAGGAAGAACCCTTGCTAACGGAAGATCTAATCAAAGAA
ACAGAGGAGCTGGTGCTCCGAACAGGGAGTCTTGGAGCTGGGTGCTCTCAACTCCTGTCT
GACATGCAGGCTTTCAAGGCAGCAAACCCTGGGTGTATATTAGAAGATTTCGTTAGATGG
CATTCTCCTCCTGATTGGATGGAATGTGATACAAATGATGGAATTAATGAAACCCTTGAT
ACTAATGACTCATTGTCTGGAAGAGGCCAACTGAGTACTCGAATGCAGAAAGAAGGCAAC
TTGTGGCGCGAACTATGGGAAACCTCAAAGCCAGTGCCGGCTGTTAGACAAACTCCTCTC
TTTGATGAGGATTTGGCAGTGGAAAGTATTCTGGATAATTTAGAGGATATATCTCCACAT
GAGCTTTTCAAGCAGCTGTTTATATCTCTTTTGGGATCAGGGTTTGTAACTGCTGAGGCC
ATCCTCTCCAACAATTCAAATTTAGCGAAGCTGTTTAGTGATTGTAAAGAATATGTCATT
GTCACCTGTGAAAGAAGCAACTGGGTTGACAAAGTTGATGAATTGTGCCAGGTCTACGAG
ACTGTTGAGACAATGGTACTCAGTCCAGATGAAGTTATAAGGATCACCTTTCAACCTGAA
GAACCTTCAGCTGCACCCCCGAATGAACTAAAACGTCGATTCAAAAGGCTTAGCCTCATA
TTCAGAAACAAGGATAAGCTATCACCGCGAGACCAGAAGAACCAGGAGGAGAGTCCATTA
CGCCAACCATTCTCATCCATGTTTTCAAAGAAACCTCCTAAGCCCGACAGTTCATCTCCA
GATAAACCTGTTACTTCCGTCGAAAATGACTGGACAATTGTATAA