Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057431
CDS Infomation

pacid=37433082 polypeptide=PGSC0003DMP400038635 locus=PGSC0003DMG400022300 ID=PGSC0003DMT400057431.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCCAATTTCCATCCAATTGAATCCTTCAATTTTCTCATTTCCATCAAATTCT
ACAAAAGCTCAATTCTTTCAACCCAATGATAAATTCTTGCTTAAACAAAAACCCAATTCG
TCTTCCCGCCAATTCTCCTCCTCCTTTCTTCAACAACAGCTTCCAGTGCACCAGCTGGCT
TCAGCTCGATTGGTGGCGGCAGCGGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCT
TCTGGTGTTGTTGAAACTGTTGAAGATAAACTTCCAGCTGATCTTCATGTTACTGAGACA
CAGGAACCCAATTCAAGGATCAGATTGAGTGTTGAAGTTCCAACTGTTGTATGTGAGGAT
TGCTACAAAAAAGTCATAAAAGAGTTCATGAGACGTTCAAAGGTTCCTGGATTTCGTCCA
GGGAAGAATGTTCCAGAAGATATCCTTGTTGGCTTTGTCGGGAAGCAAAATATTCAAAAC
GCTGTAGTTGAAGCTATTCTGAAAAGAACACTTCCACATGCCATGTCTTCGGTTACCCGG
AACGCATATGAAGACTCCATCCGCATTGTGACCAAATTTGAAGACATGGAAAAAACTTAT
CTGTCTCTGAATTGCTTGAGGTATGATGTGGTTGTTGATGTGGCTCCTGAAATCAAGTGG
AAACCTGATGATGCATACAAGAATATTAAGGTGGTTGTTGAGCTTGACAGCGATATTGAT
GCTCAAAGAGCTTCAGAAAAAGAGTTGATACGGCGTCACAAGTCTCTGGGTGCATTGAGA
ATTGTTACTGATAGGGGTTTACAGGTTGGCGATGTCGCAGTGATTGATATATCAGCAACT
ACGATTGAGCAAGATGGATCAGACGCTAAAACCATACCAGCTGCAGAGAGTAAAGGTTTC
AATTTTGATACAGAAGATGGAGATAATGTCCTTCCCGGATTTCGTGACTCAATTATTGGT
ATTAAACGAGGTGAAACGAAGTCATTCCCTTTGGTATTTCCAGACTCATGGAAACAAGAA
GATCTTCGTGGTGTTCATGCTCAATTCACTGTTGCATGTAAGGAACTGTTCTACAGAGAT
TTGCCTGAGTTGAATGACTCGATTGCTGAAAGGCTTCTCCCAGGATGCAGCTCCATTGAG
GAGGTCAAGCAAGCGTTGCTACAAAGATGTCTTGAAGTTGAACAGGCAGCTAAAGACCAA
GCAACTGATAATGCCATCCTTGACCAGCTATACAAGATGGTTGAAGTTGATATTCCTCAA
TCTCTCTTCCAAGAGCAAGGAAGGCAACTCTATGGAGCTCAACTTTTACAATTGCAGGCA
AATATGAAACTGAACGAACAGCAGCTAGCATCATTATCAAGCCCAAGGGCAGTGAATGAG
TTCCTTGAGACACAAAAAGAAAATATAATAAGTATCATAAAGCAAAATTTAGCTGTTGGT
GACATATTTACACGTGAAAATTTGCAGTTTTCAACTGAGGAGCTAGTGAAGGAGGTTCAG
AACTCAATTCAAGAATTCCAACAGCATCAACAGGAGTACGATGAGGACCGAGTTAAGCTA
CAGGTACAAGAGGTACTTGAAGGGGCAAAAGTACTTGAATGGCTAAGGGAAAATGCAGAG
ATTCAGTACATAACTAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038635
PEP Infomation

pacid=37433082 transcript=PGSC0003DMT400057431 locus=PGSC0003DMG400022300 ID=PGSC0003DMT400057431.v4.03 annot-version=v4.03
Sequence

MATPISIQLNPSIFSFPSNSTKAQFFQPNDKFLLKQKPNSSSRQFSSSFLQQQLPVHQLA
SARLVAAAAAAAAAAAAAAASGVVETVEDKLPADLHVTETQEPNSRIRLSVEVPTVVCED
CYKKVIKEFMRRSKVPGFRPGKNVPEDILVGFVGKQNIQNAVVEAILKRTLPHAMSSVTR
NAYEDSIRIVTKFEDMEKTYLSLNCLRYDVVVDVAPEIKWKPDDAYKNIKVVVELDSDID
AQRASEKELIRRHKSLGALRIVTDRGLQVGDVAVIDISATTIEQDGSDAKTIPAAESKGF
NFDTEDGDNVLPGFRDSIIGIKRGETKSFPLVFPDSWKQEDLRGVHAQFTVACKELFYRD
LPELNDSIAERLLPGCSSIEEVKQALLQRCLEVEQAAKDQATDNAILDQLYKMVEVDIPQ
SLFQEQGRQLYGAQLLQLQANMKLNEQQLASLSSPRAVNEFLETQKENIISIIKQNLAVG
DIFTRENLQFSTEELVKEVQNSIQEFQQHQQEYDEDRVKLQVQEVLEGAKVLEWLRENAE
IQYITR*

Transcript Sequence

Transcript ID

PGSC0003DMT400057431
Transcript Infomation

pacid=37433082 locus=PGSC0003DMG400022300 ID=PGSC0003DMT400057431.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCCAATTTCCATCCAATTGAATCCTTCAATTTTCTCATTTCCATCAAATTCT
ACAAAAGCTCAATTCTTTCAACCCAATGATAAATTCTTGCTTAAACAAAAACCCAATTCG
TCTTCCCGCCAATTCTCCTCCTCCTTTCTTCAACAACAGCTTCCAGTGCACCAGCTGGCT
TCAGCTCGATTGGTGGCGGCAGCGGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCT
TCTGGTGTTGTTGAAACTGTTGAAGATAAACTTCCAGCTGATCTTCATGTTACTGAGACA
CAGGAACCCAATTCAAGGATCAGATTGAGTGTTGAAGTTCCAACTGTTGTATGTGAGGAT
TGCTACAAAAAAGTCATAAAAGAGTTCATGAGACGTTCAAAGGTTCCTGGATTTCGTCCA
GGGAAGAATGTTCCAGAAGATATCCTTGTTGGCTTTGTCGGGAAGCAAAATATTCAAAAC
GCTGTAGTTGAAGCTATTCTGAAAAGAACACTTCCACATGCCATGTCTTCGGTTACCCGG
AACGCATATGAAGACTCCATCCGCATTGTGACCAAATTTGAAGACATGGAAAAAACTTAT
CTGTCTCTGAATTGCTTGAGGTATGATGTGGTTGTTGATGTGGCTCCTGAAATCAAGTGG
AAACCTGATGATGCATACAAGAATATTAAGGTGGTTGTTGAGCTTGACAGCGATATTGAT
GCTCAAAGAGCTTCAGAAAAAGAGTTGATACGGCGTCACAAGTCTCTGGGTGCATTGAGA
ATTGTTACTGATAGGGGTTTACAGGTTGGCGATGTCGCAGTGATTGATATATCAGCAACT
ACGATTGAGCAAGATGGATCAGACGCTAAAACCATACCAGCTGCAGAGAGTAAAGGTTTC
AATTTTGATACAGAAGATGGAGATAATGTCCTTCCCGGATTTCGTGACTCAATTATTGGT
ATTAAACGAGGTGAAACGAAGTCATTCCCTTTGGTATTTCCAGACTCATGGAAACAAGAA
GATCTTCGTGGTGTTCATGCTCAATTCACTGTTGCATGTAAGGAACTGTTCTACAGAGAT
TTGCCTGAGTTGAATGACTCGATTGCTGAAAGGCTTCTCCCAGGATGCAGCTCCATTGAG
GAGGTCAAGCAAGCGTTGCTACAAAGATGTCTTGAAGTTGAACAGGCAGCTAAAGACCAA
GCAACTGATAATGCCATCCTTGACCAGCTATACAAGATGGTTGAAGTTGATATTCCTCAA
TCTCTCTTCCAAGAGCAAGGAAGGCAACTCTATGGAGCTCAACTTTTACAATTGCAGGCA
AATATGAAACTGAACGAACAGCAGCTAGCATCATTATCAAGCCCAAGGGCAGTGAATGAG
TTCCTTGAGACACAAAAAGAAAATATAATAAGTATCATAAAGCAAAATTTAGCTGTTGGT
GACATATTTACACGTGAAAATTTGCAGTTTTCAACTGAGGAGCTAGTGAAGGAGGTTCAG
AACTCAATTCAAGAATTCCAACAGCATCAACAGGAGTACGATGAGGACCGAGTTAAGCTA
CAGGTACAAGAGGTACTTGAAGGGGCAAAAGTACTTGAATGGCTAAGGGAAAATGCAGAG
ATTCAGTACATAACTAGGTGA