Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057428
CDS Infomation

pacid=37432554 polypeptide=PGSC0003DMP400038633 locus=PGSC0003DMG400022299 ID=PGSC0003DMT400057428.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGTGGATGATCAAACTCCTCCTGTTCTTGATGAAACAACTTGCGGCACCCTA
CTACAAAAGCTGCAGCAAATCTGGGATGAGGTTGGTGAAACTGATGATGAGCGGGACAAG
ATGCTTCTTCAGATAGATCAAGAGTGTCTGGATGTCTACAAGAGAAAGGTTGACCATGCT
GTGAAGTCACGGGCTCACCTTCTTCAGGCATTGGCAGATGCCAAAGTTGAACTCTCCAGG
CTGCTATCGGCCCTTGGAGAGAAGACATATGTTGGAATTCCTGAGAAGACTTCAGGTACA
ATCAAGGAACAGCTTGCAGCTATAGCACCAACACTGGAAAAACTATGGAAGCAGAAAGAT
GATAGGATAAAAGACTTCTTTGATGTACAATCACAAATTCAGAAGATAAGCAGTGAGATT
GCAGGGGATAGCGAGCAAGTTGAGAGTCTAACAGTGGACGAATCTGACTTATCTGTAAAA
AAGTTGGATGAGTTTCATGTGCAACTTCAAGAGCTCCAAAAGGAGAAGAGTGACAGATTA
CACAAGGTCCTCGATCTTGTGAGTACTGTGCATGACCTTTGTGCTGTTCTTGGCATGGAC
TTCTTCAGTACTGTCACAGAGGTTCACCCAAGCCTGGATGATTCTACTGGTGTACAATCA
AAAAGTATTAGCAATGATACATTGTCAAATCTGGCCAACACTGTCTTGGTATTAAAGGAA
GATAAGAAGCAGAGATTGCTTAAGCTTCAAGAATTAGCAACTCAGCTAATTGATTTATGG
AATTTGATGGATACCCCAGAAGAAGAACGGAGCTTGTTTGACCATGTTACCTGCAACATA
TCAGCTTCAGTAGATGAAGTGGCCATTCCAGGGGCTCTTGCTCTTGATTTGATTGAACAG
GCTGAAGTGGAAGTTGAAAGGCTTGATCAACTTAAAGCTAGCAAGATGAAGGAGATTTCT
TTCAAAAGACAGGCTGAACTGGAAGACATTTATGCTCGTGCCCACGTAGAGATTGATACT
GAGGCTGCCCGAGAAAAGATTATGGGACTGATTGATTCTGGTAATGTTGATCCTGCAGAA
TTACTAGCTGACATGGACAATCAGATTGTAAATGCAAAAGAAGAGGCTCACAGTAGGAAA
GAAATATTGGAAAAAGTTGAGAAATGGATGGCAGCTTGTGAAGAAGAGAGCTGGCTTGAA
GACTATAACAGGGATGATAACCGGTATAATGCAAGCAGAGGGGCACACTTGAATTTGAAG
AGAGCTGAAAAGGCTCGGATATTGGTCAACAAAATTCCAGCTCTTGTGGACTCCTTGGTT
GCAAAAACTAGAGCATGGGAACAAGAGCGGGACACCACATTCACTTATGATGGTGTTCCA
CTACTTGCTATGCTAGACGAATATATGATGCTCAGGCACGATAGAGAAGAAGAGAAAAGA
AGGTTGAGGGACCAGAAGAAGTTCCATGAGCAGATGAGCAAAGATCCAGAAGTATTTGGA
TCAACGCCAAGCCCTGTTCGACCACTTGGTCCAAAGAAGGTAACAGGTCCACGAGCAAAT
GGCAGTGCCAATGGGCCAGCAAGCAGAAGACTGTCTCTTAATTCCCACCAAAACGGTTCC
AGGTCAACTTCTAAAGATGGAAAGAGAGACGCGAGACTCAGTGCTCCTGTGAACTATGTT
GCCATGACCAAAGACGATGCAGCGTCTCACATTTCTGGAACTGAGCCTATTCCTAGCACT
CCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400038633
PEP Infomation

pacid=37432554 transcript=PGSC0003DMT400057428 locus=PGSC0003DMG400022299 ID=PGSC0003DMT400057428.v4.03 annot-version=v4.03
Sequence

MAAVDDQTPPVLDETTCGTLLQKLQQIWDEVGETDDERDKMLLQIDQECLDVYKRKVDHA
VKSRAHLLQALADAKVELSRLLSALGEKTYVGIPEKTSGTIKEQLAAIAPTLEKLWKQKD
DRIKDFFDVQSQIQKISSEIAGDSEQVESLTVDESDLSVKKLDEFHVQLQELQKEKSDRL
HKVLDLVSTVHDLCAVLGMDFFSTVTEVHPSLDDSTGVQSKSISNDTLSNLANTVLVLKE
DKKQRLLKLQELATQLIDLWNLMDTPEEERSLFDHVTCNISASVDEVAIPGALALDLIEQ
AEVEVERLDQLKASKMKEISFKRQAELEDIYARAHVEIDTEAAREKIMGLIDSGNVDPAE
LLADMDNQIVNAKEEAHSRKEILEKVEKWMAACEEESWLEDYNRDDNRYNASRGAHLNLK
RAEKARILVNKIPALVDSLVAKTRAWEQERDTTFTYDGVPLLAMLDEYMMLRHDREEEKR
RLRDQKKFHEQMSKDPEVFGSTPSPVRPLGPKKVTGPRANGSANGPASRRLSLNSHQNGS
RSTSKDGKRDARLSAPVNYVAMTKDDAASHISGTEPIPSTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400057428
Transcript Infomation

pacid=37432554 locus=PGSC0003DMG400022299 ID=PGSC0003DMT400057428.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGTGGATGATCAAACTCCTCCTGTTCTTGATGAAACAACTTGCGGCACCCTA
CTACAAAAGCTGCAGCAAATCTGGGATGAGGTTGGTGAAACTGATGATGAGCGGGACAAG
ATGCTTCTTCAGATAGATCAAGAGTGTCTGGATGTCTACAAGAGAAAGGTTGACCATGCT
GTGAAGTCACGGGCTCACCTTCTTCAGGCATTGGCAGATGCCAAAGTTGAACTCTCCAGG
CTGCTATCGGCCCTTGGAGAGAAGACATATGTTGGAATTCCTGAGAAGACTTCAGGTACA
ATCAAGGAACAGCTTGCAGCTATAGCACCAACACTGGAAAAACTATGGAAGCAGAAAGAT
GATAGGATAAAAGACTTCTTTGATGTACAATCACAAATTCAGAAGATAAGCAGTGAGATT
GCAGGGGATAGCGAGCAAGTTGAGAGTCTAACAGTGGACGAATCTGACTTATCTGTAAAA
AAGTTGGATGAGTTTCATGTGCAACTTCAAGAGCTCCAAAAGGAGAAGAGTGACAGATTA
CACAAGGTCCTCGATCTTGTGAGTACTGTGCATGACCTTTGTGCTGTTCTTGGCATGGAC
TTCTTCAGTACTGTCACAGAGGTTCACCCAAGCCTGGATGATTCTACTGGTGTACAATCA
AAAAGTATTAGCAATGATACATTGTCAAATCTGGCCAACACTGTCTTGGTATTAAAGGAA
GATAAGAAGCAGAGATTGCTTAAGCTTCAAGAATTAGCAACTCAGCTAATTGATTTATGG
AATTTGATGGATACCCCAGAAGAAGAACGGAGCTTGTTTGACCATGTTACCTGCAACATA
TCAGCTTCAGTAGATGAAGTGGCCATTCCAGGGGCTCTTGCTCTTGATTTGATTGAACAG
GCTGAAGTGGAAGTTGAAAGGCTTGATCAACTTAAAGCTAGCAAGATGAAGGAGATTTCT
TTCAAAAGACAGGCTGAACTGGAAGACATTTATGCTCGTGCCCACGTAGAGATTGATACT
GAGGCTGCCCGAGAAAAGATTATGGGACTGATTGATTCTGGTAATGTTGATCCTGCAGAA
TTACTAGCTGACATGGACAATCAGATTGTAAATGCAAAAGAAGAGGCTCACAGTAGGAAA
GAAATATTGGAAAAAGTTGAGAAATGGATGGCAGCTTGTGAAGAAGAGAGCTGGCTTGAA
GACTATAACAGGGATGATAACCGGTATAATGCAAGCAGAGGGGCACACTTGAATTTGAAG
AGAGCTGAAAAGGCTCGGATATTGGTCAACAAAATTCCAGCTCTTGTGGACTCCTTGGTT
GCAAAAACTAGAGCATGGGAACAAGAGCGGGACACCACATTCACTTATGATGGTGTTCCA
CTACTTGCTATGCTAGACGAATATATGATGCTCAGGCACGATAGAGAAGAAGAGAAAAGA
AGGTTGAGGGACCAGAAGAAGTTCCATGAGCAGATGAGCAAAGATCCAGAAGTATTTGGA
TCAACGCCAAGCCCTGTTCGACCACTTGGTCCAAAGAAGGTAACAGGTCCACGAGCAAAT
GGCAGTGCCAATGGGCCAGCAAGCAGAAGACTGTCTCTTAATTCCCACCAAAACGGTTCC
AGGTCAACTTCTAAAGATGGAAAGAGAGACGCGAGACTCAGTGCTCCTGTGAACTATGTT
GCCATGACCAAAGACGATGCAGCGTCTCACATTTCTGGAACTGAGCCTATTCCTAGCACT
CCATAG