Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057422
CDS Infomation

pacid=37432207 polypeptide=PGSC0003DMP400038627 locus=PGSC0003DMG400022296 ID=PGSC0003DMT400057422.v4.03 annot-version=v4.03
Sequence

ATGAGCACAGTGCCGGAAGAGGCAATCGAAGTGATATCACAGAGTATCGGAATAAGCAAT
TTATCACCGGATGTCTTGCCAGCTCTCGCCGCCGACGTCGAGTACCGTATTCGGGAAATT
ATGCAGGAGGCTATAAAATGTATGCGCCATTCGAAGAGAACTACTTTATCTACTGATGAT
GTTGATTCTGCACTCACCTTGAGAAATGTAGAGCCAATATATGGTTTTGCTTCGGGAGAT
CCCTTACGGTTCAGGAGAGCTGCTGGGCATAAGGATTTGTTCTATATTGAAGAGAAGGAT
ATAGAATTCAAAGATGTGATCGAAGCACCTCTGCCGAAAGCACCACTAGATACTGCTCTT
TTTGCTCACTGGTTAGCTATAGAAGGGGTACAGCCTGCTATTCCTGAAAACCCTCCACTT
GAAGCACTTGTTCTACCTCCTGATAACCAAAAGGCAGAGTATAAGGAGGATGGAGTTCCT
GTTGATCTTAAAGTACCTGTTAAGCATGTCTTATCCCGTGAGCTTCAGCTTTATTATGAC
AAGATTACAGAGCTTATCATGAATAAATCCAACTCCCCTCTCTTCAAAGAAGCTTTAGCA
AGCTTAGCAACAGACCCTGGGCTCCATCCCTTAGTTCCTTACTTCACATATTTTGTTGCT
GATGAGGTTGCACGGAATTTGAATAATTTTGATCTCCTTTTTGCTTTGATGAGGCTAGTC
TGGAGCCTTCTTCAGAATTCTCATTTACATATTGAACCATATCTGCACCAGTCGATGCCG
TCTGTAATGACATGCCTTGTTGCGAAAAGGCTGGGGAATAAATTCGCTGACAACCATTGG
GAACTAAGGGACTTCACAGCAAAGTTGATTGCTTTAATATGCAGGCGATATGGTCATGTC
TATCACAGTCTCCAGCCACGTGTCACGAAGACTTTGCTGCATGCTTATCTTGATCCAGCT
AAGGCACTGCCACAGCATTATGGAGCAATTCAAGGGCTAGCAGCTCTTGGACCTGGTGTG
GTTCGCCTGCTTGTGCTGCCAAATCTTGAAGCTTATTTGCGATTGTTGGAGCCTGAAATG
CAGTTTGAGAAACAAAAAAATGAAGTGAAGAGACATGAAGCTTGGCGCGTATATGGGGCC
TTAATGTGCGCTGCGGGTCTATGCATGTATGAGCATTTCAAGATGCTTCCTGCATCTCTA
TCTCCATCAAATCGGACATTCCTGAAGAGTAAATTGAAAGTCTTGACTACATTGTCGAAC
AAACGCAAAACCAGCACGGACAACATGGTCTCACAGCCGCCAACCAAGAAATTAGTGACA
GATGGTCCTACACCAATGCTGTCAGATTCTTTGCCAGCAGACATACAAGGAGCTACCGAT
GGACATGACACAGTGCTGGCTGTTACAGATGGGGATTTATCATCAAGTCCACAAGATTTG
CAAAATATGAATGTGACCAATGTGACGAGACCCAGCAAAAGGGAGATTACTGGCGAGCAA
AGCCAAAAAACATCAACTGCTCTTGGTCAGGTCTTGAAGAAGGATATGGATGCTGCAAAT
TTATTGCCACAACTATTTGATTATTTTGGTGAAAGTATGTTGTTCTTTGCACCTACCCCT
GAATTGTCATTCTTTTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038627
PEP Infomation

pacid=37432207 transcript=PGSC0003DMT400057422 locus=PGSC0003DMG400022296 ID=PGSC0003DMT400057422.v4.03 annot-version=v4.03
Sequence

MSTVPEEAIEVISQSIGISNLSPDVLPALAADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDSALTLRNVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDIEFKDVIEAPLPKAPLDTAL
FAHWLAIEGVQPAIPENPPLEALVLPPDNQKAEYKEDGVPVDLKVPVKHVLSRELQLYYD
KITELIMNKSNSPLFKEALASLATDPGLHPLVPYFTYFVADEVARNLNNFDLLFALMRLV
WSLLQNSHLHIEPYLHQSMPSVMTCLVAKRLGNKFADNHWELRDFTAKLIALICRRYGHV
YHSLQPRVTKTLLHAYLDPAKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLRLLEPEM
QFEKQKNEVKRHEAWRVYGALMCAAGLCMYEHFKMLPASLSPSNRTFLKSKLKVLTTLSN
KRKTSTDNMVSQPPTKKLVTDGPTPMLSDSLPADIQGATDGHDTVLAVTDGDLSSSPQDL
QNMNVTNVTRPSKREITGEQSQKTSTALGQVLKKDMDAANLLPQLFDYFGESMLFFAPTP
ELSFFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057422
Transcript Infomation

pacid=37432207 locus=PGSC0003DMG400022296 ID=PGSC0003DMT400057422.v4.03 annot-version=v4.03
Sequence

ATGAGCACAGTGCCGGAAGAGGCAATCGAAGTGATATCACAGAGTATCGGAATAAGCAAT
TTATCACCGGATGTCTTGCCAGCTCTCGCCGCCGACGTCGAGTACCGTATTCGGGAAATT
ATGCAGGAGGCTATAAAATGTATGCGCCATTCGAAGAGAACTACTTTATCTACTGATGAT
GTTGATTCTGCACTCACCTTGAGAAATGTAGAGCCAATATATGGTTTTGCTTCGGGAGAT
CCCTTACGGTTCAGGAGAGCTGCTGGGCATAAGGATTTGTTCTATATTGAAGAGAAGGAT
ATAGAATTCAAAGATGTGATCGAAGCACCTCTGCCGAAAGCACCACTAGATACTGCTCTT
TTTGCTCACTGGTTAGCTATAGAAGGGGTACAGCCTGCTATTCCTGAAAACCCTCCACTT
GAAGCACTTGTTCTACCTCCTGATAACCAAAAGGCAGAGTATAAGGAGGATGGAGTTCCT
GTTGATCTTAAAGTACCTGTTAAGCATGTCTTATCCCGTGAGCTTCAGCTTTATTATGAC
AAGATTACAGAGCTTATCATGAATAAATCCAACTCCCCTCTCTTCAAAGAAGCTTTAGCA
AGCTTAGCAACAGACCCTGGGCTCCATCCCTTAGTTCCTTACTTCACATATTTTGTTGCT
GATGAGGTTGCACGGAATTTGAATAATTTTGATCTCCTTTTTGCTTTGATGAGGCTAGTC
TGGAGCCTTCTTCAGAATTCTCATTTACATATTGAACCATATCTGCACCAGTCGATGCCG
TCTGTAATGACATGCCTTGTTGCGAAAAGGCTGGGGAATAAATTCGCTGACAACCATTGG
GAACTAAGGGACTTCACAGCAAAGTTGATTGCTTTAATATGCAGGCGATATGGTCATGTC
TATCACAGTCTCCAGCCACGTGTCACGAAGACTTTGCTGCATGCTTATCTTGATCCAGCT
AAGGCACTGCCACAGCATTATGGAGCAATTCAAGGGCTAGCAGCTCTTGGACCTGGTGTG
GTTCGCCTGCTTGTGCTGCCAAATCTTGAAGCTTATTTGCGATTGTTGGAGCCTGAAATG
CAGTTTGAGAAACAAAAAAATGAAGTGAAGAGACATGAAGCTTGGCGCGTATATGGGGCC
TTAATGTGCGCTGCGGGTCTATGCATGTATGAGCATTTCAAGATGCTTCCTGCATCTCTA
TCTCCATCAAATCGGACATTCCTGAAGAGTAAATTGAAAGTCTTGACTACATTGTCGAAC
AAACGCAAAACCAGCACGGACAACATGGTCTCACAGCCGCCAACCAAGAAATTAGTGACA
GATGGTCCTACACCAATGCTGTCAGATTCTTTGCCAGCAGACATACAAGGAGCTACCGAT
GGACATGACACAGTGCTGGCTGTTACAGATGGGGATTTATCATCAAGTCCACAAGATTTG
CAAAATATGAATGTGACCAATGTGACGAGACCCAGCAAAAGGGAGATTACTGGCGAGCAA
AGCCAAAAAACATCAACTGCTCTTGGTCAGGTCTTGAAGAAGGATATGGATGCTGCAAAT
TTATTGCCACAACTATTTGATTATTTTGGTGAAAGTATGTTGTTCTTTGCACCTACCCCT
GAATTGTCATTCTTTTTGTGA