Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057400
CDS Infomation

pacid=37431926 polypeptide=PGSC0003DMP400038612 locus=PGSC0003DMG400022287 ID=PGSC0003DMT400057400.v4.03 annot-version=v4.03
Sequence

ATGAACTTTGATAATATTGATATAAGTAATGGAATTTTACGCAAGTCTCAAGGAATTATC
GTAGTCGATTCGAATGGTAATGGAGACTCCGTTACTGTACAAGGTGCAATCGACATGGTC
CCCGATTTTAATTTTCAACGAATCAAAATTCTTGTTCATCCCGGACTCTATAGAGAAAAA
GTGTATATTCCATCTTCAAAGCCATTTATTTCATTAATTGGTAATGAAAATCATCCTGGA
AGAACAATAATTACTGGTAACTCTAAGGCATGTGACAAGGATCAATATGGGAATGAAATA
GGCACTATTGCTACAGCCACAGTTACTGTAGAATCAGATTATTTCTGTGCAACTGGCATA
ACCTTTGAGAATACTGTGGCTGCATTGCGTCAGGAACAGGATAAGCAAGGTGTGGCATTG
AGATTAGCTGGTGACAAAGCAATGTTGTACAGAGTTAGGATTTTGGGATCACAAGACACA
CTTTATGATGATAAAGGATCACATTATTTTTTCAAGTGTTACATTCAAGGAACTGTTGAT
TTCATATGTGGCAATGCTAGATCACTTTTTCAGAGTTGTGATCTTCATTCAGTAGCTCAA
GATAATGTGGGAATATCAGGAGCAATTGCAGCACATGAAAGAGAATCACCTGATGATGAT
AGTGGATTCTCATTTGTTAATTGTAAAGTTACTGGAAGTGGAAGTGTATTTTTAGGCAGA
GCTTGGGGAGAATATTCAAGGATTATTTACTCAAAATGCTATTTTGATGCCCTTATTCAT
CCACAAGGATGGTTTGATTGGGACGTACCATCTAGAGAAGGGCATGCATTTTTTGGAGAA
TACAATTGCAAGGGAATTGGAGCAAATAGAGCAAGTCGAGTGCCATGGTCTAATAATTTC
ACTCAAGACCAAGTCAAACCCTTCTTGAAAAGAGACTTCATTGGTGGAGATCAATGGCTT
AGAATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038612
PEP Infomation

pacid=37431926 transcript=PGSC0003DMT400057400 locus=PGSC0003DMG400022287 ID=PGSC0003DMT400057400.v4.03 annot-version=v4.03
Sequence

MNFDNIDISNGILRKSQGIIVVDSNGNGDSVTVQGAIDMVPDFNFQRIKILVHPGLYREK
VYIPSSKPFISLIGNENHPGRTIITGNSKACDKDQYGNEIGTIATATVTVESDYFCATGI
TFENTVAALRQEQDKQGVALRLAGDKAMLYRVRILGSQDTLYDDKGSHYFFKCYIQGTVD
FICGNARSLFQSCDLHSVAQDNVGISGAIAAHERESPDDDSGFSFVNCKVTGSGSVFLGR
AWGEYSRIIYSKCYFDALIHPQGWFDWDVPSREGHAFFGEYNCKGIGANRASRVPWSNNF
TQDQVKPFLKRDFIGGDQWLRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057400
Transcript Infomation

pacid=37431926 locus=PGSC0003DMG400022287 ID=PGSC0003DMT400057400.v4.03 annot-version=v4.03
Sequence

ATGAACTTTGATAATATTGATATAAGTAATGGAATTTTACGCAAGTCTCAAGGAATTATC
GTAGTCGATTCGAATGGTAATGGAGACTCCGTTACTGTACAAGGTGCAATCGACATGGTC
CCCGATTTTAATTTTCAACGAATCAAAATTCTTGTTCATCCCGGACTCTATAGAGAAAAA
GTGTATATTCCATCTTCAAAGCCATTTATTTCATTAATTGGTAATGAAAATCATCCTGGA
AGAACAATAATTACTGGTAACTCTAAGGCATGTGACAAGGATCAATATGGGAATGAAATA
GGCACTATTGCTACAGCCACAGTTACTGTAGAATCAGATTATTTCTGTGCAACTGGCATA
ACCTTTGAGAATACTGTGGCTGCATTGCGTCAGGAACAGGATAAGCAAGGTGTGGCATTG
AGATTAGCTGGTGACAAAGCAATGTTGTACAGAGTTAGGATTTTGGGATCACAAGACACA
CTTTATGATGATAAAGGATCACATTATTTTTTCAAGTGTTACATTCAAGGAACTGTTGAT
TTCATATGTGGCAATGCTAGATCACTTTTTCAGAGTTGTGATCTTCATTCAGTAGCTCAA
GATAATGTGGGAATATCAGGAGCAATTGCAGCACATGAAAGAGAATCACCTGATGATGAT
AGTGGATTCTCATTTGTTAATTGTAAAGTTACTGGAAGTGGAAGTGTATTTTTAGGCAGA
GCTTGGGGAGAATATTCAAGGATTATTTACTCAAAATGCTATTTTGATGCCCTTATTCAT
CCACAAGGATGGTTTGATTGGGACGTACCATCTAGAGAAGGGCATGCATTTTTTGGAGAA
TACAATTGCAAGGGAATTGGAGCAAATAGAGCAAGTCGAGTGCCATGGTCTAATAATTTC
ACTCAAGACCAAGTCAAACCCTTCTTGAAAAGAGACTTCATTGGTGGAGATCAATGGCTT
AGAATTTAG