Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057385
CDS Infomation

pacid=37433121 polypeptide=PGSC0003DMP400038600 locus=PGSC0003DMG400022280 ID=PGSC0003DMT400057385.v4.03 annot-version=v4.03
Sequence

ATGGAGCAGTCAGAAGACACAATAATTGATATATTGCATCGGTTGCCTTCAAAATCCCTT
GCGAGATTTAAATGTGTGTCTCGTAGTTGGGGACAACATGTATCTGATTCTCGTTCTCAG
AGACAATTGTGTACTCATACTATAGGATTATTTTACCAACCTATAGGTACACAATCCCCA
ATTCGTTTTTTCTTCACTTCATCAGAGAAGAAGAATATGGTTAAAGAAAATTTCGATAAG
TCTGTAAATTTTCTACTTGACCATAGCCTATACATTATTGCATCGTCGATGGGGTTTCTC
CTTTGCTGTAAGCAAGAAATATATCAACAACATTACTATGTTTATAATCCCGCCACAAGG
CAATCCATTGCCCTTCCCCAAGCATCAACATGTGCTAAACATGTTGCAATTGGGTTTAAT
TGCAAGTTAGATGACCCAATTAATAGTGATATTGTCTCATTTACTATAGTTCGTTATGAG
ATACCTGCAGAATCAATGGTAACAATTGAAAGTTTCAGAAGTAATGTGTGGGTTAAGATA
AACTTCGCAATTGAAATTGAAATTCCTCGTATTGATTTTCATACCTCTGTTCACCACCCT
TCCAACTGGCTAAAATCAGGAGGATCTATTGATGGAGTGTTCTATTGGCTTGATTTTGGA
CCTCGAATCAACGTATATGATTGTGTCAATACATGTTTTTGGTGCATCGATGTGCCTGAT
GGACTTGATTATCAACATAAGAGAAGTTTAGGTGTATCGAGAGGAGTTCTCTGTTATGGA
GGTACGAGTCGTGGACTCATGAATTTTGGAGACATGAGTGTTTGGCACCTGAAGAGCGGT
GTGCGAGACAAGACAGCTATATGGGAGCAGTACACTACACTAAGTATTTGTATTCATGTT
TACTCTTGTCTTAGTAACTCGGGACTTTTAAAGAGTGGACGTATTCAATCTAATCGCGAT
ATGACATTTCACCCAGCTGAGCCGCTAATTCTTATTGTTTTAAATAACAAAAAAGGTGGT
GCTGAGGTTCTGATGAGCTACGACATGGACAAGTCTTGTTCAAAGGTAGTGTGTGATTTT
GGCAATGGCAATAGCAAAACGTACACCAATTTAGTTCCTTATGAGTGGCATGAATGGCCA
CTTTTTCTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038600
PEP Infomation

pacid=37433121 transcript=PGSC0003DMT400057385 locus=PGSC0003DMG400022280 ID=PGSC0003DMT400057385.v4.03 annot-version=v4.03
Sequence

MEQSEDTIIDILHRLPSKSLARFKCVSRSWGQHVSDSRSQRQLCTHTIGLFYQPIGTQSP
IRFFFTSSEKKNMVKENFDKSVNFLLDHSLYIIASSMGFLLCCKQEIYQQHYYVYNPATR
QSIALPQASTCAKHVAIGFNCKLDDPINSDIVSFTIVRYEIPAESMVTIESFRSNVWVKI
NFAIEIEIPRIDFHTSVHHPSNWLKSGGSIDGVFYWLDFGPRINVYDCVNTCFWCIDVPD
GLDYQHKRSLGVSRGVLCYGGTSRGLMNFGDMSVWHLKSGVRDKTAIWEQYTTLSICIHV
YSCLSNSGLLKSGRIQSNRDMTFHPAEPLILIVLNNKKGGAEVLMSYDMDKSCSKVVCDF
GNGNSKTYTNLVPYEWHEWPLFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057385
Transcript Infomation

pacid=37433121 locus=PGSC0003DMG400022280 ID=PGSC0003DMT400057385.v4.03 annot-version=v4.03
Sequence

ATGGAGCAGTCAGAAGACACAATAATTGATATATTGCATCGGTTGCCTTCAAAATCCCTT
GCGAGATTTAAATGTGTGTCTCGTAGTTGGGGACAACATGTATCTGATTCTCGTTCTCAG
AGACAATTGTGTACTCATACTATAGGATTATTTTACCAACCTATAGGTACACAATCCCCA
ATTCGTTTTTTCTTCACTTCATCAGAGAAGAAGAATATGGTTAAAGAAAATTTCGATAAG
TCTGTAAATTTTCTACTTGACCATAGCCTATACATTATTGCATCGTCGATGGGGTTTCTC
CTTTGCTGTAAGCAAGAAATATATCAACAACATTACTATGTTTATAATCCCGCCACAAGG
CAATCCATTGCCCTTCCCCAAGCATCAACATGTGCTAAACATGTTGCAATTGGGTTTAAT
TGCAAGTTAGATGACCCAATTAATAGTGATATTGTCTCATTTACTATAGTTCGTTATGAG
ATACCTGCAGAATCAATGGTAACAATTGAAAGTTTCAGAAGTAATGTGTGGGTTAAGATA
AACTTCGCAATTGAAATTGAAATTCCTCGTATTGATTTTCATACCTCTGTTCACCACCCT
TCCAACTGGCTAAAATCAGGAGGATCTATTGATGGAGTGTTCTATTGGCTTGATTTTGGA
CCTCGAATCAACGTATATGATTGTGTCAATACATGTTTTTGGTGCATCGATGTGCCTGAT
GGACTTGATTATCAACATAAGAGAAGTTTAGGTGTATCGAGAGGAGTTCTCTGTTATGGA
GGTACGAGTCGTGGACTCATGAATTTTGGAGACATGAGTGTTTGGCACCTGAAGAGCGGT
GTGCGAGACAAGACAGCTATATGGGAGCAGTACACTACACTAAGTATTTGTATTCATGTT
TACTCTTGTCTTAGTAACTCGGGACTTTTAAAGAGTGGACGTATTCAATCTAATCGCGAT
ATGACATTTCACCCAGCTGAGCCGCTAATTCTTATTGTTTTAAATAACAAAAAAGGTGGT
GCTGAGGTTCTGATGAGCTACGACATGGACAAGTCTTGTTCAAAGGTAGTGTGTGATTTT
GGCAATGGCAATAGCAAAACGTACACCAATTTAGTTCCTTATGAGTGGCATGAATGGCCA
CTTTTTCTTTAG