Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057334
CDS Infomation

pacid=37433131 polypeptide=PGSC0003DMP400038574 locus=PGSC0003DMG400022264 ID=PGSC0003DMT400057334.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTCCTTCAAGAAATCCCTTTCTTCTTCTTCTTTTACTTTTCCTCTCTTCTTGT
TATTCACTTGATGTACAAACTCAAACACTTCTTGCATGGAAAAAAACATTAAACATAACT
TCCAATGATGTTTTAACATCATGGGATTCTTTAGATAAAAGTCCTTGTAATTGGTTTGGC
ATAAACTGCAATTCCAATGGTCATGTTGTTAGTATAAGTCTTAAATCAGTTGATTTACAA
GGTCCATTGCCTTCAAATTTTCAGTCACTTAAATTCTTGAACACTCTTGTTCTTTCATCT
GTTAATCTTAGTGGTCCAATCCCAAAAGAGTTTGGAGATTATCTTGAACTTAAGTTCATT
GATATTAGTGATAATTCAATCACTGGTGTCATTCCTCAAGAACTTTGTAAGCTTATAAAG
TTACAAACTTTATCACTTAGTTCAAATTTTCTTGAAGGTGATATCCCTTCAGACATTGGG
AACTTGTCTGATCTTAAGATGTTCTTGATTTATGACAATCAACTTAGTGGTGAAATTCCA
AAGGGTATTGGAAAGTTGAAGAATCTTGAAGAATTTAGAGCTGGAGGGAATCAAAATCTT
AAAGGAGAACTCCCTTTTGAGATTGGAAACTGTTTGAACTTGGTTTTTTTAGGCCTTGCT
GAAACAAGCATTTCAGGGAATTTGCCAGTGTCAATTGGAAACCTGAAAAAGATTCAGACA
ATTGCAATTTATACAGCTCTTTTGTCTGGACCAATTCCAGAAGAGATTGGGAATTGTAGT
GAACTACAGAACTTGTATTTGTATCAGAATTCGATCTCTGGTTCGATTCCAAGGAGTATA
GGGGAACTCAGGAAGCTTCAAAGTTTGTTGCTTTGGCAGAATAGTATAGTTGGTGTGATT
CCAAATGAGCTTGGGAATTGTAAGGCTATTACAGTTATTGACTTGTCTGAGAATCTCTTA
ACAGGTAGTATTCCTACAAGCTTTGGTGAACTTTCAAGTCTTGAAGAGTTGCAGTTGAGT
GTCAATAAGTTATCAGGTACAATACCTACTGAAATATCAAATTGTACTAAATTGTCTCAT
TTGGAAGTTGACAATAATGGCATATCAGGTGAAATTCCTAATGAAATAGGTAAGTTAAAG
AGCTTGACTTTATTCTTTGCTTGGCAAAATAATTTAACAGGTGAAATTCCTGTTACATTA
TCTAACTGTGAGAATCTTCAGGCTATAGACCTTTCTTATAACAATCTTTTTGGTTCCATA
CCAAAAGAAATCTTTAGTTTGAAAAATCTAACAAAGTTGTTGCTTCTTTCCAATGATTTG
TCTGGTTTTATACCAACTGATGTTGGAAACTGCACAAATTTGTATAGACTTAGAGTGAAT
AGGAATAGGCTAGGGGGTACTGTTCCATCAGAAATAGGAAAGTTGAAGAATTTGAATTTT
CTTGACATGAGTGGCAATCACTTTATGGGAGAAATTCCTTCAGCAATATCAGGATGTCAA
AATCTTGAGTTTCTTGATCTCCATTCGAACGCGTTTACTGGTTCTTTACCAGAGAAACTG
CCAGGGAGTCTACAGTATGTGGATATTTCAGACAACAGGCTTTCGGGTTCGTTAAGTCCA
AGTGTTGGTTCTTTAACAGAATTAACAAAATTGAATCTTGGGAAGAATCAACTTTGTGGT
AGAATTCCAGCTGAGATAGTTTCTTGTAGTAAGCTTCAGCTGTTAGATCTCGGGTACAAT
GGCTTATCAGGCGATATACCTAAAGAGTTGGGTCGAATACCATCCCTTGAAATCTCTCTT
AACCTTAGTTGTAACCAGTTTACAGGAGTGATTCCAAGTGAGTTTTCAGGTCTTAGTAAA
TTAGGAAACCTTGATCTTTCCCACAACAAACTCACCGGGAATTTGGACGTTCTCACGAAC
CTTCAAAACCTTGTTTCACTCAATATATCATTCAATGACTTCTATGGAAAACTTCCCAAT
GCTCCATTCTTTCATAATCTTCCTTTGAGTGATCTTACTGGAAACCAAGCTCTATACATT
TCTGGAGGGGACGTGATCCAAACGGGGCCTGCTGGACATGCTAAAACCACCATGAAGCTT
GCTATGTCAATCCTAGTCAGTATAAGTGCTGTGCTGGTGCTGCTAGCCATCTACACATTG
ATCAGGATGCAAATGGCGGCAAAGTATGGACCAGAAGTTGATACTTGGGAAATGACTCTT
TACCAGAAGTTGGACTTTTCAATAGATGACATTGTTCATAATCTAACATCAGCTAATGTC
ATTGGCACTGGGAGCTCTGGGGTTGTCTACAGGATAATGACCGAAAATGGGGTGACTTTA
GCAGTCAAGAAAATGTGGTCATCAGAGGGATCAGGAGCATTTGGTTCAGAAATTCAAACA
CTTGGTTCAATCCGGCACAAGAACATAGTACGCCTTCTCGGCTGGGCTTCAAACCAGAAC
ATGAAACTTCTGTTCTATGACTACCTTCCCAATGGGAGTTTGAGCTCATTGCTCCATGGT
GTTGGCAAAGGAGCAGCAGAATGGGAGAACAGATTTGATGTGGTCCTTGGAGTAGCTCAT
GCACTTGCATACTTGCATCATGACTGTGTACCCCCTATAATGCATGGAGATGTCAAAGCA
ATGAATGTATTGTTAGGCTCTAGAATGGAGCCTTACCTGGCCGATTTCGGGTTGGCAAGG
ATTGTCAACACTGATGTTGATGCAGACTTGTTGAAGGAGAGCCAAAGGCCTCATCTTGCT
GGTTCCTATGGATATATGGCTCCAGAACATGCTTCGATGCAACGGATCACAGAAAAGAGT
GATGTATACAGCTTTGGTGTGGTCCTCTTGGAGGTACTAACAGGAAGGCATCCACTGGAC
CCAACGTTGCCCGGGGGTGCACACTTAGTACAATGGATACGCGATCACTTACAAAGCAAG
CGCGATCCAAATGACATTCTTGATCCAAAGCTTAGAGGCAGAGCTGACCCTGAGATGCAT
GAAATGCTGCAAACTTTAGCTGTTTCATTCCTGTGTGTGAGCACGAAAGCTGATGATCGT
CCGATGATGAGGGATGTTGTAGCCATGCTCAAGGAAATTCGGAATGTTGATCCTGTTGTG
TCCGAATCCGACTTGTTGAAGAAAAAAGCAAGTGTAACACCTCTTCCAAAATCACCTGGC
ACCAAGAATGTGGATTCTCAAATGTCTTGTAGCTGCTCTTTTGTATTTTCTGATAACTCT
ATCTCCAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400038574
PEP Infomation

pacid=37433131 transcript=PGSC0003DMT400057334 locus=PGSC0003DMG400022264 ID=PGSC0003DMT400057334.v4.03 annot-version=v4.03
Sequence

MPAPSRNPFLLLLLLFLSSCYSLDVQTQTLLAWKKTLNITSNDVLTSWDSLDKSPCNWFG
INCNSNGHVVSISLKSVDLQGPLPSNFQSLKFLNTLVLSSVNLSGPIPKEFGDYLELKFI
DISDNSITGVIPQELCKLIKLQTLSLSSNFLEGDIPSDIGNLSDLKMFLIYDNQLSGEIP
KGIGKLKNLEEFRAGGNQNLKGELPFEIGNCLNLVFLGLAETSISGNLPVSIGNLKKIQT
IAIYTALLSGPIPEEIGNCSELQNLYLYQNSISGSIPRSIGELRKLQSLLLWQNSIVGVI
PNELGNCKAITVIDLSENLLTGSIPTSFGELSSLEELQLSVNKLSGTIPTEISNCTKLSH
LEVDNNGISGEIPNEIGKLKSLTLFFAWQNNLTGEIPVTLSNCENLQAIDLSYNNLFGSI
PKEIFSLKNLTKLLLLSNDLSGFIPTDVGNCTNLYRLRVNRNRLGGTVPSEIGKLKNLNF
LDMSGNHFMGEIPSAISGCQNLEFLDLHSNAFTGSLPEKLPGSLQYVDISDNRLSGSLSP
SVGSLTELTKLNLGKNQLCGRIPAEIVSCSKLQLLDLGYNGLSGDIPKELGRIPSLEISL
NLSCNQFTGVIPSEFSGLSKLGNLDLSHNKLTGNLDVLTNLQNLVSLNISFNDFYGKLPN
APFFHNLPLSDLTGNQALYISGGDVIQTGPAGHAKTTMKLAMSILVSISAVLVLLAIYTL
IRMQMAAKYGPEVDTWEMTLYQKLDFSIDDIVHNLTSANVIGTGSSGVVYRIMTENGVTL
AVKKMWSSEGSGAFGSEIQTLGSIRHKNIVRLLGWASNQNMKLLFYDYLPNGSLSSLLHG
VGKGAAEWENRFDVVLGVAHALAYLHHDCVPPIMHGDVKAMNVLLGSRMEPYLADFGLAR
IVNTDVDADLLKESQRPHLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD
PTLPGGAHLVQWIRDHLQSKRDPNDILDPKLRGRADPEMHEMLQTLAVSFLCVSTKADDR
PMMRDVVAMLKEIRNVDPVVSESDLLKKKASVTPLPKSPGTKNVDSQMSCSCSFVFSDNS
ISK*

Transcript Sequence

Transcript ID

PGSC0003DMT400057334
Transcript Infomation

pacid=37433131 locus=PGSC0003DMG400022264 ID=PGSC0003DMT400057334.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTCCTTCAAGAAATCCCTTTCTTCTTCTTCTTTTACTTTTCCTCTCTTCTTGT
TATTCACTTGATGTACAAACTCAAACACTTCTTGCATGGAAAAAAACATTAAACATAACT
TCCAATGATGTTTTAACATCATGGGATTCTTTAGATAAAAGTCCTTGTAATTGGTTTGGC
ATAAACTGCAATTCCAATGGTCATGTTGTTAGTATAAGTCTTAAATCAGTTGATTTACAA
GGTCCATTGCCTTCAAATTTTCAGTCACTTAAATTCTTGAACACTCTTGTTCTTTCATCT
GTTAATCTTAGTGGTCCAATCCCAAAAGAGTTTGGAGATTATCTTGAACTTAAGTTCATT
GATATTAGTGATAATTCAATCACTGGTGTCATTCCTCAAGAACTTTGTAAGCTTATAAAG
TTACAAACTTTATCACTTAGTTCAAATTTTCTTGAAGGTGATATCCCTTCAGACATTGGG
AACTTGTCTGATCTTAAGATGTTCTTGATTTATGACAATCAACTTAGTGGTGAAATTCCA
AAGGGTATTGGAAAGTTGAAGAATCTTGAAGAATTTAGAGCTGGAGGGAATCAAAATCTT
AAAGGAGAACTCCCTTTTGAGATTGGAAACTGTTTGAACTTGGTTTTTTTAGGCCTTGCT
GAAACAAGCATTTCAGGGAATTTGCCAGTGTCAATTGGAAACCTGAAAAAGATTCAGACA
ATTGCAATTTATACAGCTCTTTTGTCTGGACCAATTCCAGAAGAGATTGGGAATTGTAGT
GAACTACAGAACTTGTATTTGTATCAGAATTCGATCTCTGGTTCGATTCCAAGGAGTATA
GGGGAACTCAGGAAGCTTCAAAGTTTGTTGCTTTGGCAGAATAGTATAGTTGGTGTGATT
CCAAATGAGCTTGGGAATTGTAAGGCTATTACAGTTATTGACTTGTCTGAGAATCTCTTA
ACAGGTAGTATTCCTACAAGCTTTGGTGAACTTTCAAGTCTTGAAGAGTTGCAGTTGAGT
GTCAATAAGTTATCAGGTACAATACCTACTGAAATATCAAATTGTACTAAATTGTCTCAT
TTGGAAGTTGACAATAATGGCATATCAGGTGAAATTCCTAATGAAATAGGTAAGTTAAAG
AGCTTGACTTTATTCTTTGCTTGGCAAAATAATTTAACAGGTGAAATTCCTGTTACATTA
TCTAACTGTGAGAATCTTCAGGCTATAGACCTTTCTTATAACAATCTTTTTGGTTCCATA
CCAAAAGAAATCTTTAGTTTGAAAAATCTAACAAAGTTGTTGCTTCTTTCCAATGATTTG
TCTGGTTTTATACCAACTGATGTTGGAAACTGCACAAATTTGTATAGACTTAGAGTGAAT
AGGAATAGGCTAGGGGGTACTGTTCCATCAGAAATAGGAAAGTTGAAGAATTTGAATTTT
CTTGACATGAGTGGCAATCACTTTATGGGAGAAATTCCTTCAGCAATATCAGGATGTCAA
AATCTTGAGTTTCTTGATCTCCATTCGAACGCGTTTACTGGTTCTTTACCAGAGAAACTG
CCAGGGAGTCTACAGTATGTGGATATTTCAGACAACAGGCTTTCGGGTTCGTTAAGTCCA
AGTGTTGGTTCTTTAACAGAATTAACAAAATTGAATCTTGGGAAGAATCAACTTTGTGGT
AGAATTCCAGCTGAGATAGTTTCTTGTAGTAAGCTTCAGCTGTTAGATCTCGGGTACAAT
GGCTTATCAGGCGATATACCTAAAGAGTTGGGTCGAATACCATCCCTTGAAATCTCTCTT
AACCTTAGTTGTAACCAGTTTACAGGAGTGATTCCAAGTGAGTTTTCAGGTCTTAGTAAA
TTAGGAAACCTTGATCTTTCCCACAACAAACTCACCGGGAATTTGGACGTTCTCACGAAC
CTTCAAAACCTTGTTTCACTCAATATATCATTCAATGACTTCTATGGAAAACTTCCCAAT
GCTCCATTCTTTCATAATCTTCCTTTGAGTGATCTTACTGGAAACCAAGCTCTATACATT
TCTGGAGGGGACGTGATCCAAACGGGGCCTGCTGGACATGCTAAAACCACCATGAAGCTT
GCTATGTCAATCCTAGTCAGTATAAGTGCTGTGCTGGTGCTGCTAGCCATCTACACATTG
ATCAGGATGCAAATGGCGGCAAAGTATGGACCAGAAGTTGATACTTGGGAAATGACTCTT
TACCAGAAGTTGGACTTTTCAATAGATGACATTGTTCATAATCTAACATCAGCTAATGTC
ATTGGCACTGGGAGCTCTGGGGTTGTCTACAGGATAATGACCGAAAATGGGGTGACTTTA
GCAGTCAAGAAAATGTGGTCATCAGAGGGATCAGGAGCATTTGGTTCAGAAATTCAAACA
CTTGGTTCAATCCGGCACAAGAACATAGTACGCCTTCTCGGCTGGGCTTCAAACCAGAAC
ATGAAACTTCTGTTCTATGACTACCTTCCCAATGGGAGTTTGAGCTCATTGCTCCATGGT
GTTGGCAAAGGAGCAGCAGAATGGGAGAACAGATTTGATGTGGTCCTTGGAGTAGCTCAT
GCACTTGCATACTTGCATCATGACTGTGTACCCCCTATAATGCATGGAGATGTCAAAGCA
ATGAATGTATTGTTAGGCTCTAGAATGGAGCCTTACCTGGCCGATTTCGGGTTGGCAAGG
ATTGTCAACACTGATGTTGATGCAGACTTGTTGAAGGAGAGCCAAAGGCCTCATCTTGCT
GGTTCCTATGGATATATGGCTCCAGAACATGCTTCGATGCAACGGATCACAGAAAAGAGT
GATGTATACAGCTTTGGTGTGGTCCTCTTGGAGGTACTAACAGGAAGGCATCCACTGGAC
CCAACGTTGCCCGGGGGTGCACACTTAGTACAATGGATACGCGATCACTTACAAAGCAAG
CGCGATCCAAATGACATTCTTGATCCAAAGCTTAGAGGCAGAGCTGACCCTGAGATGCAT
GAAATGCTGCAAACTTTAGCTGTTTCATTCCTGTGTGTGAGCACGAAAGCTGATGATCGT
CCGATGATGAGGGATGTTGTAGCCATGCTCAAGGAAATTCGGAATGTTGATCCTGTTGTG
TCCGAATCCGACTTGTTGAAGAAAAAAGCAAGTGTAACACCTCTTCCAAAATCACCTGGC
ACCAAGAATGTGGATTCTCAAATGTCTTGTAGCTGCTCTTTTGTATTTTCTGATAACTCT
ATCTCCAAATAA