Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057328
CDS Infomation

pacid=37432608 polypeptide=PGSC0003DMP400038568 locus=PGSC0003DMG400022260 ID=PGSC0003DMT400057328.v4.03 annot-version=v4.03
Sequence

ATGAGTGATTCTGCTTATCGTGTTGATACTACTTCTCGTCTTGCTCAATGGCGAATCGAC
AATTTGGCTTCATGTACTTATCGCAAATCAGATCCTTTCAAGATCGGAAAATGGAATTGG
CATTTAGCTGTGGAGAAGAACAGGACATTGTCTATTAAATTATATCCAGAGATATCAAAT
TTCACAAGAGAGAATCCTCCAATTGCATCTTTTATTATTAGATTAATCTCGTCGTTGGGA
GATCGCAAGACTTTGATTCACCCTGAAGTTATAGAGAAGCAACTCAAGAGTAGCGACGAT
TTTGTTTGGCCTATTGAAATCCCCTTAACCGGGAAGTTCATCATTGACGTTGAATTCCTT
GATCTGAAGACTGCAACGCCTAATAGTGGGGAGCTGTGCTCTATCTGGGATGAAGGATTA
ACCGAGAAGCAATCGAATGCAACTGCTCTGTCATCACTTGGCCGAATGTTGTCTGAGAGC
ATTCACACGGACATCATAATCAATGCTTCAGATGGAAGCATTGGAGCGCATCGTGCAGTT
CTTGCTGCAAGGTCACCTGTCTTCCGAAGCATGTTCTCCCATGACCTCAAAGAGAAAGAA
TTATCTGCTATAAACATCTCCGACATGTCAATAGAAGCTTGCCAATGCTTTCTGAATTAC
ATTTACGGGAACATACAAAATGAAGAATTTTTAACCCATCGACTGGCTTTGCTTCGAGCA
GCTGATAAGTACGACCTCTCAGATTTAAAGGAGGCATGTCATGAAAGTCTAATGGAAGAC
ATTGACGCGAAGAATGTTCTTGAGAGGCTCCAAACTGCTTCTCTTTATCAACTGCCAAAC
CTGAAGGCCTGTTGTATGAGGTATCTCGTGAGGTTTGGTAAAATATTCGATATAAGAGAT
GATTTCTCTGCATTTCTGCAACATGCAGACAGAGAAATCATCGGTGAAATCTTCCACGAA
GTTCTTGCTGCTTGGAAAGGATTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038568
PEP Infomation

pacid=37432608 transcript=PGSC0003DMT400057328 locus=PGSC0003DMG400022260 ID=PGSC0003DMT400057328.v4.03 annot-version=v4.03
Sequence

MSDSAYRVDTTSRLAQWRIDNLASCTYRKSDPFKIGKWNWHLAVEKNRTLSIKLYPEISN
FTRENPPIASFIIRLISSLGDRKTLIHPEVIEKQLKSSDDFVWPIEIPLTGKFIIDVEFL
DLKTATPNSGELCSIWDEGLTEKQSNATALSSLGRMLSESIHTDIIINASDGSIGAHRAV
LAARSPVFRSMFSHDLKEKELSAINISDMSIEACQCFLNYIYGNIQNEEFLTHRLALLRA
ADKYDLSDLKEACHESLMEDIDAKNVLERLQTASLYQLPNLKACCMRYLVRFGKIFDIRD
DFSAFLQHADREIIGEIFHEVLAAWKGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400057328
Transcript Infomation

pacid=37432608 locus=PGSC0003DMG400022260 ID=PGSC0003DMT400057328.v4.03 annot-version=v4.03
Sequence

ATGAGTGATTCTGCTTATCGTGTTGATACTACTTCTCGTCTTGCTCAATGGCGAATCGAC
AATTTGGCTTCATGTACTTATCGCAAATCAGATCCTTTCAAGATCGGAAAATGGAATTGG
CATTTAGCTGTGGAGAAGAACAGGACATTGTCTATTAAATTATATCCAGAGATATCAAAT
TTCACAAGAGAGAATCCTCCAATTGCATCTTTTATTATTAGATTAATCTCGTCGTTGGGA
GATCGCAAGACTTTGATTCACCCTGAAGTTATAGAGAAGCAACTCAAGAGTAGCGACGAT
TTTGTTTGGCCTATTGAAATCCCCTTAACCGGGAAGTTCATCATTGACGTTGAATTCCTT
GATCTGAAGACTGCAACGCCTAATAGTGGGGAGCTGTGCTCTATCTGGGATGAAGGATTA
ACCGAGAAGCAATCGAATGCAACTGCTCTGTCATCACTTGGCCGAATGTTGTCTGAGAGC
ATTCACACGGACATCATAATCAATGCTTCAGATGGAAGCATTGGAGCGCATCGTGCAGTT
CTTGCTGCAAGGTCACCTGTCTTCCGAAGCATGTTCTCCCATGACCTCAAAGAGAAAGAA
TTATCTGCTATAAACATCTCCGACATGTCAATAGAAGCTTGCCAATGCTTTCTGAATTAC
ATTTACGGGAACATACAAAATGAAGAATTTTTAACCCATCGACTGGCTTTGCTTCGAGCA
GCTGATAAGTACGACCTCTCAGATTTAAAGGAGGCATGTCATGAAAGTCTAATGGAAGAC
ATTGACGCGAAGAATGTTCTTGAGAGGCTCCAAACTGCTTCTCTTTATCAACTGCCAAAC
CTGAAGGCCTGTTGTATGAGGTATCTCGTGAGGTTTGGTAAAATATTCGATATAAGAGAT
GATTTCTCTGCATTTCTGCAACATGCAGACAGAGAAATCATCGGTGAAATCTTCCACGAA
GTTCTTGCTGCTTGGAAAGGATTCTGA