Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057320
CDS Infomation

pacid=37433463 polypeptide=PGSC0003DMP400038562 locus=PGSC0003DMG400022258 ID=PGSC0003DMT400057320.v4.03 annot-version=v4.03
Sequence

ATGACAGTAGGAGCAGGAATTTGTGTAGCTGAAAGGAAGCTTAATGTATTGGGGCAAAGC
ATTCTAACTGATGTTGATGAAAATATTATTGTTAGTCAGCCAAATGGTGAAGCTTTCACT
AATGGGGCATTTCTTGGTGTTAACTCAGACAGAGTTGGTAGTCATAGGGTCTTCCCTATT
GGCAAACTACAAGGATTGAGATTTATGTGTGGTTTCCGGTTCAAGTTATGGTGGATGACA
CAGAGAATGGGTACATCTGGCCAAGATATACCATTTGAGACTCAGTTTTTGATTGTGGAA
GGAAATGATGGTTCAAATTTTGATCAAGACAACCAGCAAAATTCAGCATTGTATGTTGTT
TTCTTGCCTATTCTAGAGGGAGATTTTAGGGCTGTTCTTCAAGGGAATTCAAACGACGAG
TTAGAGATATGTCTGGAAAGTGGAGATCCTGCTGTGCAAGATTTCGAGGGAAGCCATTTG
GTTTATGTAGCAGCTGGACCAGACCCTTTTGATGTCATTACTAATGCTGTCAAGACGGTG
GAGAGGCAATTACAGACATTTTGTCACCGTGATAGAAAGAAGATGCCAGACATGTTGAAC
TGGTTCGGATGGTGCACGTGGGATGCTTTCTATACAACCGTTTCTTCAGAGGGAGTGAAG
CAAGGACTAGAGAGTTTGGAGAAAGGAGGTATTCCCCCAAAGTTTGTACTCATTGATGAT
GGATGGCAATCAGTGAGTATGGATCCCAATGGCATCGAATCCATTGCTGATAACCATGCA
AACTTTGCAAACAGGCTAACTCATATCAAAGAGAACCATAAGTTTCAGAAAAATGGAAAG
GAAGGTCATAGGGTTAACGATCCTGCAATGGGACTTCGACATGTTGTTACCAATATCAAA
GACCAACACAATTTGAAGTATGTGTACATGTGGCATGCACTTGCTGGTTACTGGGGTGGT
GTGAGACCCGGGGTCCCTGGGATGGAACACTACGAATCCAAGTTATCTTTCCCAGTTTCA
TCTCCCGGGACTGAGTCACAGGAACCTGATGATGCTTTGAGCAGCTTGATAAAGAACGGT
CTTGGTCTAGTGAACCCTGAGAAAGTTTTATACTTCTATAATGAACTGCACTCATACCTT
GCTTCTGCGGGTATAGATGGGGTTAAAGTAGATGTTCAGAACATCCTTGAAACACTTGGA
GCTGGTCATGGTGGAAGAGTAAAACTCGCAAGAAAGTATCATCAAGCATTAGAGGCATCT
ATTGCTCGAAATTTTCCTGATAATGGAATTATTTCATGCATGAGCCATAGTAATGATAGT
TTGTTCAGTGCAAAGCGTTCAGCTGTTATAAGAGCATCAGATGATTTCTGGCCACGAGAC
CCTGCATCACACACAATTCACATAGCATCAGTGGCGTACAACACCATTTTCCTTGGTGAA
TTCATGCAGCCTGATTGGGATATGTTTCATAGTGTGCATCCCATGGCTGAATACCACGGA
GCAGCACGAGCAGTTGGAGGCTGTGCTATTTATGTCAGTGACAAGCCTGGACAGCACGAC
TTTAATCTTCTAAAGAAGCTTGTACTTCCAGATGGTTCCATATTACGCGCCAAACTTCCA
GGAAGGCCAACTAGAGACTGCTTGTTTTCTGATCCAGCAAGAGACGGGATAAGTCTTTTG
AAGATTTGGAATCTCAACGATTTCAACGGAGTAATCGGTGTATTCAACTGTCAAGGTGCT
GGATGGTGTAAGGTTGGCAAGAAGAATCTAATCCACGATTGTCAACCAGGGACGATAACT
GGGATTGTTCGCGCTATTGATGTCAATTACTTACCAAGGATTGCTCATGATGGATGGACT
GGCGATGCCATTCTGTATTCTCATCTTCATAGGGAATTGATCAATCTTCCTAAAAATGCT
TCGATTCCAATCACTCTAAACGCGAGAGAATATGAAGTCTTTACAGTTGTTCCAATCAAT
GAAATGTCTACAGGATCAAGATTTGCTCCGATTGGTCTTGTGAATATGTTCAATTCAGGA
GGAGCAATCAAAGAGCTGAAGTATGAAACAGAGGGAAAATGTGGATTAGTTTCCATGAAG
GTTCGCGGATGTGGAATGTTTGGTGCTTATTCATCTGGGAAGCCTAAACGAATACAAGTT
GACAATGAAGAAGTACATTTTGATTACGACGAATCCTCTGGATTAATCACCATTAATATT
AGAGTTCCTGATGAAGAATTATACCTTTGGGATGTAAAAGTTGAAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038562
PEP Infomation

pacid=37433463 transcript=PGSC0003DMT400057320 locus=PGSC0003DMG400022258 ID=PGSC0003DMT400057320.v4.03 annot-version=v4.03
Sequence

MTVGAGICVAERKLNVLGQSILTDVDENIIVSQPNGEAFTNGAFLGVNSDRVGSHRVFPI
GKLQGLRFMCGFRFKLWWMTQRMGTSGQDIPFETQFLIVEGNDGSNFDQDNQQNSALYVV
FLPILEGDFRAVLQGNSNDELEICLESGDPAVQDFEGSHLVYVAAGPDPFDVITNAVKTV
ERQLQTFCHRDRKKMPDMLNWFGWCTWDAFYTTVSSEGVKQGLESLEKGGIPPKFVLIDD
GWQSVSMDPNGIESIADNHANFANRLTHIKENHKFQKNGKEGHRVNDPAMGLRHVVTNIK
DQHNLKYVYMWHALAGYWGGVRPGVPGMEHYESKLSFPVSSPGTESQEPDDALSSLIKNG
LGLVNPEKVLYFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEAS
IARNFPDNGIISCMSHSNDSLFSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGE
FMQPDWDMFHSVHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLP
GRPTRDCLFSDPARDGISLLKIWNLNDFNGVIGVFNCQGAGWCKVGKKNLIHDCQPGTIT
GIVRAIDVNYLPRIAHDGWTGDAILYSHLHRELINLPKNASIPITLNAREYEVFTVVPIN
EMSTGSRFAPIGLVNMFNSGGAIKELKYETEGKCGLVSMKVRGCGMFGAYSSGKPKRIQV
DNEEVHFDYDESSGLITINIRVPDEELYLWDVKVEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400057320
Transcript Infomation

pacid=37433463 locus=PGSC0003DMG400022258 ID=PGSC0003DMT400057320.v4.03 annot-version=v4.03
Sequence

ATGACAGTAGGAGCAGGAATTTGTGTAGCTGAAAGGAAGCTTAATGTATTGGGGCAAAGC
ATTCTAACTGATGTTGATGAAAATATTATTGTTAGTCAGCCAAATGGTGAAGCTTTCACT
AATGGGGCATTTCTTGGTGTTAACTCAGACAGAGTTGGTAGTCATAGGGTCTTCCCTATT
GGCAAACTACAAGGATTGAGATTTATGTGTGGTTTCCGGTTCAAGTTATGGTGGATGACA
CAGAGAATGGGTACATCTGGCCAAGATATACCATTTGAGACTCAGTTTTTGATTGTGGAA
GGAAATGATGGTTCAAATTTTGATCAAGACAACCAGCAAAATTCAGCATTGTATGTTGTT
TTCTTGCCTATTCTAGAGGGAGATTTTAGGGCTGTTCTTCAAGGGAATTCAAACGACGAG
TTAGAGATATGTCTGGAAAGTGGAGATCCTGCTGTGCAAGATTTCGAGGGAAGCCATTTG
GTTTATGTAGCAGCTGGACCAGACCCTTTTGATGTCATTACTAATGCTGTCAAGACGGTG
GAGAGGCAATTACAGACATTTTGTCACCGTGATAGAAAGAAGATGCCAGACATGTTGAAC
TGGTTCGGATGGTGCACGTGGGATGCTTTCTATACAACCGTTTCTTCAGAGGGAGTGAAG
CAAGGACTAGAGAGTTTGGAGAAAGGAGGTATTCCCCCAAAGTTTGTACTCATTGATGAT
GGATGGCAATCAGTGAGTATGGATCCCAATGGCATCGAATCCATTGCTGATAACCATGCA
AACTTTGCAAACAGGCTAACTCATATCAAAGAGAACCATAAGTTTCAGAAAAATGGAAAG
GAAGGTCATAGGGTTAACGATCCTGCAATGGGACTTCGACATGTTGTTACCAATATCAAA
GACCAACACAATTTGAAGTATGTGTACATGTGGCATGCACTTGCTGGTTACTGGGGTGGT
GTGAGACCCGGGGTCCCTGGGATGGAACACTACGAATCCAAGTTATCTTTCCCAGTTTCA
TCTCCCGGGACTGAGTCACAGGAACCTGATGATGCTTTGAGCAGCTTGATAAAGAACGGT
CTTGGTCTAGTGAACCCTGAGAAAGTTTTATACTTCTATAATGAACTGCACTCATACCTT
GCTTCTGCGGGTATAGATGGGGTTAAAGTAGATGTTCAGAACATCCTTGAAACACTTGGA
GCTGGTCATGGTGGAAGAGTAAAACTCGCAAGAAAGTATCATCAAGCATTAGAGGCATCT
ATTGCTCGAAATTTTCCTGATAATGGAATTATTTCATGCATGAGCCATAGTAATGATAGT
TTGTTCAGTGCAAAGCGTTCAGCTGTTATAAGAGCATCAGATGATTTCTGGCCACGAGAC
CCTGCATCACACACAATTCACATAGCATCAGTGGCGTACAACACCATTTTCCTTGGTGAA
TTCATGCAGCCTGATTGGGATATGTTTCATAGTGTGCATCCCATGGCTGAATACCACGGA
GCAGCACGAGCAGTTGGAGGCTGTGCTATTTATGTCAGTGACAAGCCTGGACAGCACGAC
TTTAATCTTCTAAAGAAGCTTGTACTTCCAGATGGTTCCATATTACGCGCCAAACTTCCA
GGAAGGCCAACTAGAGACTGCTTGTTTTCTGATCCAGCAAGAGACGGGATAAGTCTTTTG
AAGATTTGGAATCTCAACGATTTCAACGGAGTAATCGGTGTATTCAACTGTCAAGGTGCT
GGATGGTGTAAGGTTGGCAAGAAGAATCTAATCCACGATTGTCAACCAGGGACGATAACT
GGGATTGTTCGCGCTATTGATGTCAATTACTTACCAAGGATTGCTCATGATGGATGGACT
GGCGATGCCATTCTGTATTCTCATCTTCATAGGGAATTGATCAATCTTCCTAAAAATGCT
TCGATTCCAATCACTCTAAACGCGAGAGAATATGAAGTCTTTACAGTTGTTCCAATCAAT
GAAATGTCTACAGGATCAAGATTTGCTCCGATTGGTCTTGTGAATATGTTCAATTCAGGA
GGAGCAATCAAAGAGCTGAAGTATGAAACAGAGGGAAAATGTGGATTAGTTTCCATGAAG
GTTCGCGGATGTGGAATGTTTGGTGCTTATTCATCTGGGAAGCCTAAACGAATACAAGTT
GACAATGAAGAAGTACATTTTGATTACGACGAATCCTCTGGATTAATCACCATTAATATT
AGAGTTCCTGATGAAGAATTATACCTTTGGGATGTAAAAGTTGAAATGTGA