Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057307
CDS Infomation

pacid=37434752 polypeptide=PGSC0003DMP400038550 locus=PGSC0003DMG400022254 ID=PGSC0003DMT400057307.v4.03 annot-version=v4.03
Sequence

ATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCAT
ATCGCCGGACTACGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTATCTCTCAGAG
TTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGA
TTGCTGAATCAGGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGAT
CAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGA
GCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAAATATCAGGTTTAATGCACTCC
CCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGA
ACACTCAGAATTGATATACCAGTGGATCAATATCCTAGTTACAATTTCGTGGGCCGACTC
CTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTG
ATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGAAGAAATGATGAGAGGCAAACCG
GGGTATGAGCACCTGAATGAGCCTCTACATGTTATTGTGGAAGCTGAACTGCCAGTGGAG
ATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAGGCCTATG
GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTCAATGGT
ACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTT
GGGATGAAGAGGGCTAAAACCAGAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038550
PEP Infomation

pacid=37434752 transcript=PGSC0003DMT400057307 locus=PGSC0003DMG400022254 ID=PGSC0003DMT400057307.v4.03 annot-version=v4.03
Sequence

MSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYR
LLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFHSEISGLMHS
PSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECRVL
IRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLRPM
DESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLGMKRAKTRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400057307
Transcript Infomation

pacid=37434752 locus=PGSC0003DMG400022254 ID=PGSC0003DMT400057307.v4.03 annot-version=v4.03
Sequence

ATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCAT
ATCGCCGGACTACGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTATCTCTCAGAG
TTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGA
TTGCTGAATCAGGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGAT
CAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGA
GCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAAATATCAGGTTTAATGCACTCC
CCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGA
ACACTCAGAATTGATATACCAGTGGATCAATATCCTAGTTACAATTTCGTGGGCCGACTC
CTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTG
ATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGAAGAAATGATGAGAGGCAAACCG
GGGTATGAGCACCTGAATGAGCCTCTACATGTTATTGTGGAAGCTGAACTGCCAGTGGAG
ATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAGGCCTATG
GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTCAATGGT
ACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTT
GGGATGAAGAGGGCTAAAACCAGAGTGTGA