Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057264
CDS Infomation

pacid=37433409 polypeptide=PGSC0003DMP400038521 locus=PGSC0003DMG400022243 ID=PGSC0003DMT400057264.v4.03 annot-version=v4.03
Sequence

ATGAGGCTAAGCTTCATTCGACCCATTTCATGTTGCTCTGTTTCATCTCCAGCTACCTCA
CTGAAACTTCAAAAACCGCTATTTTTAAGGCCACCCACCTTCAAAACAACCATATCAGAC
CTCAAAAAATGGCACCTTTGGGCTAAATCCCTAACTTCTTCTGTGGGTTCCACTTTCTTG
GAACTGGACAATGGCCCAGACTCCGAATTGTTGCTCAGAGAGCTAAATTGGCTTGTTGAA
GATGCAATTCAAACACCCAAATCGTTCTTGCAACAACCCCAAAAAAATTACAATGATAAT
AGCTCTGTTTCAATTCGGGCGTCTTTGGAAGAACTATATATGTTGTGGAAACAAAGGGTA
GAAGAAAGAAGGCCATTTCAGTATGTGGTTGGTTGTGAACATTGGAGGGATTTGGTTTTG
AGTGTTCAAGAAGGGGTTTTGATTCCAAGGCCAGAGACTGAGCTGATTGTGGACCTTGTG
GATGATGCTATTAAGGAGACTGATGAGTTGAGGGAAGGATTGTGGGCTGATTTGGGGACT
GGAAGTGGTGCACTTGCTATTGGGATTGCAAGGATTTTGGGTAGTTCTGGTAGAGTTGTT
GCTACTGATTTAAGCCCTGTTGCTACTGCAGTTGCATCTTATAATGTGCAGAGGTATGAA
TTGGAGGAAAAAGTGCATGTAAAGCAAGGATCTTGGTTTGAGCCTTTGAGAGATGATGAA
GGACAATTTGTGGGACTGGTCAGTAATCCACCGTATATTCCAAGCAAAGATATTGGTGGA
CTACAAGCTGAAGTTGGTAGACATGAACCTCAACTAGCGTTAGACGGTGGAGCAAGTGGT
ATGAATGACCTTATCCATCTCTGTGATGGAGCTGTTTCAATGTTGAAACCTGGCGGTTTC
TTTGCATTTGAGACAAATGGTGATGAACAGAGCAAATTCCTAGTCCACTACATTGAGACT
AAGAAGCAAGGTAACTTCTCTAAAGTGAAGATGGTACCAGATTTTGCTGGCATCCAGAGA
TTTATAACAGGATTTAGAGGAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038521
PEP Infomation

pacid=37433409 transcript=PGSC0003DMT400057264 locus=PGSC0003DMG400022243 ID=PGSC0003DMT400057264.v4.03 annot-version=v4.03
Sequence

MRLSFIRPISCCSVSSPATSLKLQKPLFLRPPTFKTTISDLKKWHLWAKSLTSSVGSTFL
ELDNGPDSELLLRELNWLVEDAIQTPKSFLQQPQKNYNDNSSVSIRASLEELYMLWKQRV
EERRPFQYVVGCEHWRDLVLSVQEGVLIPRPETELIVDLVDDAIKETDELREGLWADLGT
GSGALAIGIARILGSSGRVVATDLSPVATAVASYNVQRYELEEKVHVKQGSWFEPLRDDE
GQFVGLVSNPPYIPSKDIGGLQAEVGRHEPQLALDGGASGMNDLIHLCDGAVSMLKPGGF
FAFETNGDEQSKFLVHYIETKKQGNFSKVKMVPDFAGIQRFITGFRGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400057264
Transcript Infomation

pacid=37433409 locus=PGSC0003DMG400022243 ID=PGSC0003DMT400057264.v4.03 annot-version=v4.03
Sequence

ATGAGGCTAAGCTTCATTCGACCCATTTCATGTTGCTCTGTTTCATCTCCAGCTACCTCA
CTGAAACTTCAAAAACCGCTATTTTTAAGGCCACCCACCTTCAAAACAACCATATCAGAC
CTCAAAAAATGGCACCTTTGGGCTAAATCCCTAACTTCTTCTGTGGGTTCCACTTTCTTG
GAACTGGACAATGGCCCAGACTCCGAATTGTTGCTCAGAGAGCTAAATTGGCTTGTTGAA
GATGCAATTCAAACACCCAAATCGTTCTTGCAACAACCCCAAAAAAATTACAATGATAAT
AGCTCTGTTTCAATTCGGGCGTCTTTGGAAGAACTATATATGTTGTGGAAACAAAGGGTA
GAAGAAAGAAGGCCATTTCAGTATGTGGTTGGTTGTGAACATTGGAGGGATTTGGTTTTG
AGTGTTCAAGAAGGGGTTTTGATTCCAAGGCCAGAGACTGAGCTGATTGTGGACCTTGTG
GATGATGCTATTAAGGAGACTGATGAGTTGAGGGAAGGATTGTGGGCTGATTTGGGGACT
GGAAGTGGTGCACTTGCTATTGGGATTGCAAGGATTTTGGGTAGTTCTGGTAGAGTTGTT
GCTACTGATTTAAGCCCTGTTGCTACTGCAGTTGCATCTTATAATGTGCAGAGGTATGAA
TTGGAGGAAAAAGTGCATGTAAAGCAAGGATCTTGGTTTGAGCCTTTGAGAGATGATGAA
GGACAATTTGTGGGACTGGTCAGTAATCCACCGTATATTCCAAGCAAAGATATTGGTGGA
CTACAAGCTGAAGTTGGTAGACATGAACCTCAACTAGCGTTAGACGGTGGAGCAAGTGGT
ATGAATGACCTTATCCATCTCTGTGATGGAGCTGTTTCAATGTTGAAACCTGGCGGTTTC
TTTGCATTTGAGACAAATGGTGATGAACAGAGCAAATTCCTAGTCCACTACATTGAGACT
AAGAAGCAAGGTAACTTCTCTAAAGTGAAGATGGTACCAGATTTTGCTGGCATCCAGAGA
TTTATAACAGGATTTAGAGGAAGATGA