Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057242
CDS Infomation

pacid=37434870 polypeptide=PGSC0003DMP400038503 locus=PGSC0003DMG400022235 ID=PGSC0003DMT400057242.v4.03 annot-version=v4.03
Sequence

ATGGCAGGCAATGGCCTGCCAGCTCTGGGTCGTGTAAAGCTCAGTGATTTGGTACCATTG
GAAGGTCTTCCTTCCGATTCGTATAAATTATCGGTCTCAACTTTGTCACAGTCATTGGCT
CAGTATTCAGCTGCCATTATCCAGCTATCCACAAGTGATGGAGCTCTTTTAAGGTCTAGT
CTAGAGTCTGCCCGACTTTACTTTCAACATAAACCCTCTTATCCTTCTGCGGATGTTATT
CATTCTGATGACTCTCGTGAGTGGTGTAAGACCTCTGGTTACCATGCAGATCCTCAACAA
TGGCAAGAAACTTATGATTTTAGGCCAGGGCTCACTCCTTCGGAACCCACCAGTGATATT
GAATTCCCTCCTGCTGGTTTGTCTGACATATTCTCTTTGCTTGGAAGAGCAGCAAGAGAT
ATATTGGACGCCATCAGCTTCTATTTAAATCTGCGTAGCTCTCCATTTACTGAAATACTT
GATAATGTTCCACTCAGAAACCGAGAAATATCATCCTCTGTATTATCCGTCTGTTGTCAT
GCCAGGCCATCTTTTCAGGGTGCTCAGCACCATGGCCTGACAACGCAAGAGGATGGTCAG
TTAGGGATGTTCTCGGATCATGAGCATCAGGTTGACAGAAGCCTTGTTACAATTGTTAAG
TCGGATAGGCCTGGTCTACACGTGAGAGATTTTCACGGTCACTGGGTTCTTGTGGATGGT
GATCTTGGCCCCCAGGAAGCAATAGTTTATCCTGGCCTTGCATTATATCAGGCAACTGCG
GGCTATATCAGCCCTGCACTTCATCGGACAGACATTGGTAATCAGCAGGGTAGCATGTAT
GGACGCTGTTCCCTTTCTTTTAAACTTATGCCCAAGTCCATGACCAACCTCAATTGTACA
GAGATGCGGGCTGCTGGCCACGGGGTTGAAGCTCAATTCCAGCTTCCCGTACCAGTTGAT
GACTTCATGCAGAGATCAACTGATCAGTTGCTTAACAGGAGCAATTTCCCTACATTCAAC
TTTCCAACAGTCCAAGATGGATCTATGAAGCCCATGATGAGGAGGAGGAAGAGTAACTCA
AGATCTAAACCTCTTCCACCTTCAAAGAGGTTGAGATTGGAGGCACAAAGAGTTCTCAAA
GAGAGAGTTCAAGACATAGCTGATAAAAAGGGCATCAAGCTGAGGTTCTGCACCTTAAAG
GATTGTGAAAGTCACATCCAGTCACTTGATTGCCCATGTACGAACATAAGAATGGAAATT
GGATGGCCACCGGGAGTTCCATTTGTTCACCCACATGATCTCCCAAATAAGGCTAAGATT
GGATTTCTTGAAACATATGAACCTGGTTGGTCTGCAACTCATGATATGGAGTTGAGCCTA
ATCGATCCCGGACAGCCAAGTCAACACACTTCTAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038503
PEP Infomation

pacid=37434870 transcript=PGSC0003DMT400057242 locus=PGSC0003DMG400022235 ID=PGSC0003DMT400057242.v4.03 annot-version=v4.03
Sequence

MAGNGLPALGRVKLSDLVPLEGLPSDSYKLSVSTLSQSLAQYSAAIIQLSTSDGALLRSS
LESARLYFQHKPSYPSADVIHSDDSREWCKTSGYHADPQQWQETYDFRPGLTPSEPTSDI
EFPPAGLSDIFSLLGRAARDILDAISFYLNLRSSPFTEILDNVPLRNREISSSVLSVCCH
ARPSFQGAQHHGLTTQEDGQLGMFSDHEHQVDRSLVTIVKSDRPGLHVRDFHGHWVLVDG
DLGPQEAIVYPGLALYQATAGYISPALHRTDIGNQQGSMYGRCSLSFKLMPKSMTNLNCT
EMRAAGHGVEAQFQLPVPVDDFMQRSTDQLLNRSNFPTFNFPTVQDGSMKPMMRRRKSNS
RSKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKDCESHIQSLDCPCTNIRMEI
GWPPGVPFVHPHDLPNKAKIGFLETYEPGWSATHDMELSLIDPGQPSQHTSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400057242
Transcript Infomation

pacid=37434870 locus=PGSC0003DMG400022235 ID=PGSC0003DMT400057242.v4.03 annot-version=v4.03
Sequence

ATGGCAGGCAATGGCCTGCCAGCTCTGGGTCGTGTAAAGCTCAGTGATTTGGTACCATTG
GAAGGTCTTCCTTCCGATTCGTATAAATTATCGGTCTCAACTTTGTCACAGTCATTGGCT
CAGTATTCAGCTGCCATTATCCAGCTATCCACAAGTGATGGAGCTCTTTTAAGGTCTAGT
CTAGAGTCTGCCCGACTTTACTTTCAACATAAACCCTCTTATCCTTCTGCGGATGTTATT
CATTCTGATGACTCTCGTGAGTGGTGTAAGACCTCTGGTTACCATGCAGATCCTCAACAA
TGGCAAGAAACTTATGATTTTAGGCCAGGGCTCACTCCTTCGGAACCCACCAGTGATATT
GAATTCCCTCCTGCTGGTTTGTCTGACATATTCTCTTTGCTTGGAAGAGCAGCAAGAGAT
ATATTGGACGCCATCAGCTTCTATTTAAATCTGCGTAGCTCTCCATTTACTGAAATACTT
GATAATGTTCCACTCAGAAACCGAGAAATATCATCCTCTGTATTATCCGTCTGTTGTCAT
GCCAGGCCATCTTTTCAGGGTGCTCAGCACCATGGCCTGACAACGCAAGAGGATGGTCAG
TTAGGGATGTTCTCGGATCATGAGCATCAGGTTGACAGAAGCCTTGTTACAATTGTTAAG
TCGGATAGGCCTGGTCTACACGTGAGAGATTTTCACGGTCACTGGGTTCTTGTGGATGGT
GATCTTGGCCCCCAGGAAGCAATAGTTTATCCTGGCCTTGCATTATATCAGGCAACTGCG
GGCTATATCAGCCCTGCACTTCATCGGACAGACATTGGTAATCAGCAGGGTAGCATGTAT
GGACGCTGTTCCCTTTCTTTTAAACTTATGCCCAAGTCCATGACCAACCTCAATTGTACA
GAGATGCGGGCTGCTGGCCACGGGGTTGAAGCTCAATTCCAGCTTCCCGTACCAGTTGAT
GACTTCATGCAGAGATCAACTGATCAGTTGCTTAACAGGAGCAATTTCCCTACATTCAAC
TTTCCAACAGTCCAAGATGGATCTATGAAGCCCATGATGAGGAGGAGGAAGAGTAACTCA
AGATCTAAACCTCTTCCACCTTCAAAGAGGTTGAGATTGGAGGCACAAAGAGTTCTCAAA
GAGAGAGTTCAAGACATAGCTGATAAAAAGGGCATCAAGCTGAGGTTCTGCACCTTAAAG
GATTGTGAAAGTCACATCCAGTCACTTGATTGCCCATGTACGAACATAAGAATGGAAATT
GGATGGCCACCGGGAGTTCCATTTGTTCACCCACATGATCTCCCAAATAAGGCTAAGATT
GGATTTCTTGAAACATATGAACCTGGTTGGTCTGCAACTCATGATATGGAGTTGAGCCTA
ATCGATCCCGGACAGCCAAGTCAACACACTTCTAACTGA