Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057236
CDS Infomation

pacid=37431710 polypeptide=PGSC0003DMP400038497 locus=PGSC0003DMG400022232 ID=PGSC0003DMT400057236.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGGGGATATTATCAAGGTCTCTCTCTCTTCTCAAGTCTTCCACTTTCTTACTC
TCCACAAAGCCCCAATACTTTTCTACTAAGAAAACATTCTACTCCCAAGCTGCACCAACC
TATTTCTCTTATAAGCTGGTGGGTTCTGTTACATGTCGCATGGATTCATCAAGGGTGGGA
ACACGGGCAACATTCTCAACACAAGCTGTCTCCTCCAATGAATCTGTTGTTTCAGTTGAC
TGGCTCCACGCAAACCTCAAACTGCCTGATATAAAGGTACTGGATGCATCTTGGTACATG
CCAAACGAGCAGAGAAACCCTCTTCAAGAGTATCAGGTTGCACATATTCCTGGAGCACTC
TTCTTTGATGTAGATGGTATATCTGATCGTACTACAAATTTGCCTCATATGCTGCCATCT
GAAGAAGCATTTGCTGCTGCTGTATCTGCTCTTGGAATTGAGAACAAAGATGGGGTTGTT
GTCTATGATGGGAAGGGCATCTTTAGTGCAGCTCGTGTATGGTGGATGTTTAGAGTTTTT
GGACATGACAGAGTTTGGGTTCTAGATGGTGGCTTGCCAAGATGGCGTGCTTCTGGATAT
GATGTCGAATCCAGTGCATCTGGTGACGCAATTTTGAAAGCTAGCGCTGCCAGTGAAGCA
ATAGAGAAAGTATATCAACGACAGGCGGTTGCACCTATTACCTTTCAGACCAAATTTCAG
CCACATCTCGTCTGGACCCTTGATCAGGTTTGGAAGAACATTGAAGAGACAACATATCAG
CATATAGATGCTCGATCCAAAGCTAGGTTTGATGGTGTTGCACCAGAGCCTCGAAAAGGA
ATAAGAAGTGGTCATGTACCTGGGAGCAAGTGCATTCCTTTTTCCCAGATGCTTGATGGT
TCTCAGACACTATTATCTAATGAAGAGCTCAAGAAAAAATTTGATCAGGAAGGTATCTCT
TTGGACAAACCTATAGTAACTTCCTGTGGCACTGGAGTAACAGCTTGCATACTTGCCTTG
GGCCTCCATCGACTTGGAAAGACTGATGTTCCAGTCTATGATGGTTCATGGACAGAATGG
GGAGGGCATCCAGATGTACCAGTCTCCACATCTGAAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400038497
PEP Infomation

pacid=37431710 transcript=PGSC0003DMT400057236 locus=PGSC0003DMG400022232 ID=PGSC0003DMT400057236.v4.03 annot-version=v4.03
Sequence

MASGILSRSLSLLKSSTFLLSTKPQYFSTKKTFYSQAAPTYFSYKLVGSVTCRMDSSRVG
TRATFSTQAVSSNESVVSVDWLHANLKLPDIKVLDASWYMPNEQRNPLQEYQVAHIPGAL
FFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVF
GHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQRQAVAPITFQTKFQ
PHLVWTLDQVWKNIEETTYQHIDARSKARFDGVAPEPRKGIRSGHVPGSKCIPFSQMLDG
SQTLLSNEELKKKFDQEGISLDKPIVTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEW
GGHPDVPVSTSEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400057236
Transcript Infomation

pacid=37431710 locus=PGSC0003DMG400022232 ID=PGSC0003DMT400057236.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGGGGATATTATCAAGGTCTCTCTCTCTTCTCAAGTCTTCCACTTTCTTACTC
TCCACAAAGCCCCAATACTTTTCTACTAAGAAAACATTCTACTCCCAAGCTGCACCAACC
TATTTCTCTTATAAGCTGGTGGGTTCTGTTACATGTCGCATGGATTCATCAAGGGTGGGA
ACACGGGCAACATTCTCAACACAAGCTGTCTCCTCCAATGAATCTGTTGTTTCAGTTGAC
TGGCTCCACGCAAACCTCAAACTGCCTGATATAAAGGTACTGGATGCATCTTGGTACATG
CCAAACGAGCAGAGAAACCCTCTTCAAGAGTATCAGGTTGCACATATTCCTGGAGCACTC
TTCTTTGATGTAGATGGTATATCTGATCGTACTACAAATTTGCCTCATATGCTGCCATCT
GAAGAAGCATTTGCTGCTGCTGTATCTGCTCTTGGAATTGAGAACAAAGATGGGGTTGTT
GTCTATGATGGGAAGGGCATCTTTAGTGCAGCTCGTGTATGGTGGATGTTTAGAGTTTTT
GGACATGACAGAGTTTGGGTTCTAGATGGTGGCTTGCCAAGATGGCGTGCTTCTGGATAT
GATGTCGAATCCAGTGCATCTGGTGACGCAATTTTGAAAGCTAGCGCTGCCAGTGAAGCA
ATAGAGAAAGTATATCAACGACAGGCGGTTGCACCTATTACCTTTCAGACCAAATTTCAG
CCACATCTCGTCTGGACCCTTGATCAGGTTTGGAAGAACATTGAAGAGACAACATATCAG
CATATAGATGCTCGATCCAAAGCTAGGTTTGATGGTGTTGCACCAGAGCCTCGAAAAGGA
ATAAGAAGTGGTCATGTACCTGGGAGCAAGTGCATTCCTTTTTCCCAGATGCTTGATGGT
TCTCAGACACTATTATCTAATGAAGAGCTCAAGAAAAAATTTGATCAGGAAGGTATCTCT
TTGGACAAACCTATAGTAACTTCCTGTGGCACTGGAGTAACAGCTTGCATACTTGCCTTG
GGCCTCCATCGACTTGGAAAGACTGATGTTCCAGTCTATGATGGTTCATGGACAGAATGG
GGAGGGCATCCAGATGTACCAGTCTCCACATCTGAAGCATAG