Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057212
CDS Infomation

pacid=37431799 polypeptide=PGSC0003DMP400038479 locus=PGSC0003DMG400022224 ID=PGSC0003DMT400057212.v4.03 annot-version=v4.03
Sequence

ATGAACATTATAGTAACTATTTTCCTATTTCTACTCCCGGTATTCCTCCTCCTTGTTCGG
AGGAGGAGATCATTGAAGAGGGTTCCACCAGGATCCCTTGGAATTCCAATCATCGGCCAA
AGTCTTGGGATGCTAAGGGCAATGAAAGCCAACACGGCAGAGAAATGGCTTGAAGAAAGA
GTACAAAGATATGGTCCTATCTCAAAGCTAAGCCTCTTTGGCAAGCCCACAGTATTCATT
TATGGACAGGCTGCTAACAAGTTTGTATTTACCAGTGATTGCTCTGTTCTCACTAATCAG
CAGCCACAATCAGTCAAGATGATTCTGGGCGATCGTTGCCTTTTGGAACTCAATGGTGAA
GATCATAAACGGGTTAGAGATGCCCTGGTATCATTCTTGAAGCCAGATTGTCTTAAGCGT
TATGTTGGAAAGATGGAAGAAGAAGTCAGAATCCACCTCGAGACTTGCTGGAAAGACAAG
CAAATAATTAAGGTATTACCTTTGATGAAGACACTCACCTTCAACATTATTTGCTCTCTC
CTTTTCGGGCTTGAGCGTGGATCACAAAGAGACCAAATGGTTCATTATTTCGAGCAGATG
ATAGAAGGGGTGTGGTCAATCCCTATAAACTTGCCTTTTATGCGTTTCAATCGAAGCCTC
AAGGCAAGCAAAGATGTCCAGAAAATGCTGAAACAACTTATTTTGGAGAAACGCCATGAG
TTTGACAACAACTTAGCTTCATCCCACCAGGATCTCATCACCTGTTTGCTCAGCATCCGT
GGAGAGAACAACCAAGAACTCATATCTGAAACTGAGATCATTCACAATGTCATGCTCATA
ATGGTTGCTGGATATGACACTTCATCCATCTTGATAACTTTCATCGTAAGACTTTTAGCA
AAGAATCCAAACATCTATGCAGCTGTCCTTAAAGAACAAGAAGAGATAGCACAGATCAAG
TCACCTGGAGAGTCCCTAACTTGGGAAGACCTTGTCAAGATGAAATACACCTGGAGAGTG
GCAATGGAAACAATGAGAATGTTCCCACCCGTTTTCGGAAACTTCAGGCAGACTGTAAAA
GACATTGAGTACGGTGGCTACCTCATTCCGAAAGGATGGCAAATATTCTGGGTAATGGCT
AAAACACACATGGATAGCAGCATTTTCCAAGAACCAGAGAAATTTGATCCAGCACGTTTT
GAGAACTCAGCATCTTTGCCTCCTTACAACTTTGTTCCATTCGGAGGGGGAGCCCGTATA
TGTCCTGGATACGAGTTTGCGAAGATTGAAACCTTGGTCACAATCCATTACCTAGTAACA
CATTTCACATGGAAGCTATGCTGTACAGATGATTTCTTCAGCAGGGACCCAATGCCGGTA
CCAACTCAAGGACTTCCCATCCAAATAGTTCCCACGAAACCTCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038479
PEP Infomation

pacid=37431799 transcript=PGSC0003DMT400057212 locus=PGSC0003DMG400022224 ID=PGSC0003DMT400057212.v4.03 annot-version=v4.03
Sequence

MNIIVTIFLFLLPVFLLLVRRRRSLKRVPPGSLGIPIIGQSLGMLRAMKANTAEKWLEER
VQRYGPISKLSLFGKPTVFIYGQAANKFVFTSDCSVLTNQQPQSVKMILGDRCLLELNGE
DHKRVRDALVSFLKPDCLKRYVGKMEEEVRIHLETCWKDKQIIKVLPLMKTLTFNIICSL
LFGLERGSQRDQMVHYFEQMIEGVWSIPINLPFMRFNRSLKASKDVQKMLKQLILEKRHE
FDNNLASSHQDLITCLLSIRGENNQELISETEIIHNVMLIMVAGYDTSSILITFIVRLLA
KNPNIYAAVLKEQEEIAQIKSPGESLTWEDLVKMKYTWRVAMETMRMFPPVFGNFRQTVK
DIEYGGYLIPKGWQIFWVMAKTHMDSSIFQEPEKFDPARFENSASLPPYNFVPFGGGARI
CPGYEFAKIETLVTIHYLVTHFTWKLCCTDDFFSRDPMPVPTQGLPIQIVPTKPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057212
Transcript Infomation

pacid=37431799 locus=PGSC0003DMG400022224 ID=PGSC0003DMT400057212.v4.03 annot-version=v4.03
Sequence

ATGAACATTATAGTAACTATTTTCCTATTTCTACTCCCGGTATTCCTCCTCCTTGTTCGG
AGGAGGAGATCATTGAAGAGGGTTCCACCAGGATCCCTTGGAATTCCAATCATCGGCCAA
AGTCTTGGGATGCTAAGGGCAATGAAAGCCAACACGGCAGAGAAATGGCTTGAAGAAAGA
GTACAAAGATATGGTCCTATCTCAAAGCTAAGCCTCTTTGGCAAGCCCACAGTATTCATT
TATGGACAGGCTGCTAACAAGTTTGTATTTACCAGTGATTGCTCTGTTCTCACTAATCAG
CAGCCACAATCAGTCAAGATGATTCTGGGCGATCGTTGCCTTTTGGAACTCAATGGTGAA
GATCATAAACGGGTTAGAGATGCCCTGGTATCATTCTTGAAGCCAGATTGTCTTAAGCGT
TATGTTGGAAAGATGGAAGAAGAAGTCAGAATCCACCTCGAGACTTGCTGGAAAGACAAG
CAAATAATTAAGGTATTACCTTTGATGAAGACACTCACCTTCAACATTATTTGCTCTCTC
CTTTTCGGGCTTGAGCGTGGATCACAAAGAGACCAAATGGTTCATTATTTCGAGCAGATG
ATAGAAGGGGTGTGGTCAATCCCTATAAACTTGCCTTTTATGCGTTTCAATCGAAGCCTC
AAGGCAAGCAAAGATGTCCAGAAAATGCTGAAACAACTTATTTTGGAGAAACGCCATGAG
TTTGACAACAACTTAGCTTCATCCCACCAGGATCTCATCACCTGTTTGCTCAGCATCCGT
GGAGAGAACAACCAAGAACTCATATCTGAAACTGAGATCATTCACAATGTCATGCTCATA
ATGGTTGCTGGATATGACACTTCATCCATCTTGATAACTTTCATCGTAAGACTTTTAGCA
AAGAATCCAAACATCTATGCAGCTGTCCTTAAAGAACAAGAAGAGATAGCACAGATCAAG
TCACCTGGAGAGTCCCTAACTTGGGAAGACCTTGTCAAGATGAAATACACCTGGAGAGTG
GCAATGGAAACAATGAGAATGTTCCCACCCGTTTTCGGAAACTTCAGGCAGACTGTAAAA
GACATTGAGTACGGTGGCTACCTCATTCCGAAAGGATGGCAAATATTCTGGGTAATGGCT
AAAACACACATGGATAGCAGCATTTTCCAAGAACCAGAGAAATTTGATCCAGCACGTTTT
GAGAACTCAGCATCTTTGCCTCCTTACAACTTTGTTCCATTCGGAGGGGGAGCCCGTATA
TGTCCTGGATACGAGTTTGCGAAGATTGAAACCTTGGTCACAATCCATTACCTAGTAACA
CATTTCACATGGAAGCTATGCTGTACAGATGATTTCTTCAGCAGGGACCCAATGCCGGTA
CCAACTCAAGGACTTCCCATCCAAATAGTTCCCACGAAACCTCTATGA