Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057201
CDS Infomation

pacid=37432102 polypeptide=PGSC0003DMP400038471 locus=PGSC0003DMG400022218 ID=PGSC0003DMT400057201.v4.03 annot-version=v4.03
Sequence

ATGAACCAACCTGTTCAAGGGGACAGCTCCAGCACCCCTGCTATCCTTCCTTTGAAGCGA
AGAAGGGGTCGCCCTCGTAAGGATCCTAGCTTAAAGCGTGTTGTTCGTGCTCAAGTTCCT
CCACCTTTTGAACTAGTGCAAGAGATCCAACCACAACAAGTAAATAGAAATGATGGAAAT
AATGTGATGATAGGCCAGGCTGTTACAGGCGTTGTTGAGTCTGCATTTGATGCTGGTTAT
TTGCTCAATGTTAGAATTGGTGACTCCAATACGAACTACAGGGGTGTTGTTTTTAAGCCA
GGACATTATATTCCTGTCACAGCTGCAAATGATGTCGCCCCACATCTTCAGATGATCAGA
AGAAATGAGGTTCGTCCTCCGGCTGTAAACCAGCGTAATGGATCAGTTAAGCTTGGATCT
AGGTCCTCAAAAAGCAAACAGGTAGTAATGCATCCCTCAGTCCCTCCAGTGGGTGCCAGA
GGCACAGTAGTTCCTGTTGTGCTACAGCCTGTCAATTTGACAAATGGACTAGCATCTAGT
CAGAGTTCTGCATCCCAAGCTTCAAACAGGGAGTCTTCAAGGGAGAAAGATGTTCAGATG
GTTAAGCCATTGGCTATGCTGCCACCTGATGGACCAGTAACCCCTGGACAGCTACCACCA
GAACCAACTCGTGAAACACTTGCTTCACAAGCTCAAGTTGGCAACAAAGTAGCAATAGGT
ACTGGGCAGAAAGAAGATGGCTATCTTAGCAAGGGAGCAGAAGCTGTGAAAGAGGAAGAG
GTGCAGCCAGCTGTATCAACCAACGTAGCAATACCTGTTGCAGTGGCCAACGTGTCTCAA
GGATCTGGGCTGTCACAAAAAGAAGATACTGGAAACAATGAAGCCTCTAACAAGTTGTCA
GCTGAACATTCACCTGTGATACCAAAACTAGATACTGTGAATCAGGTTCCCTCAGCAGAA
CCAAGTGAACCAGCAATCCCCGCTCTTCATACCCAGGCTACATCTGTTTCTAAGCCGCTG
ATGAACTATGGTACTGGCAGGATGACCGAACTTCTACAGGCTGTGCAGGAAAATCTGAAG
GAGAACCAGCTGCTTCGTACTGGAGAATCAGGACTTGGTGTAATGAAGACTCCAACAACT
GATGGCGGTAAGGAGGAGACTAGCGTTCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038471
PEP Infomation

pacid=37432102 transcript=PGSC0003DMT400057201 locus=PGSC0003DMG400022218 ID=PGSC0003DMT400057201.v4.03 annot-version=v4.03
Sequence

MNQPVQGDSSSTPAILPLKRRRGRPRKDPSLKRVVRAQVPPPFELVQEIQPQQVNRNDGN
NVMIGQAVTGVVESAFDAGYLLNVRIGDSNTNYRGVVFKPGHYIPVTAANDVAPHLQMIR
RNEVRPPAVNQRNGSVKLGSRSSKSKQVVMHPSVPPVGARGTVVPVVLQPVNLTNGLASS
QSSASQASNRESSREKDVQMVKPLAMLPPDGPVTPGQLPPEPTRETLASQAQVGNKVAIG
TGQKEDGYLSKGAEAVKEEEVQPAVSTNVAIPVAVANVSQGSGLSQKEDTGNNEASNKLS
AEHSPVIPKLDTVNQVPSAEPSEPAIPALHTQATSVSKPLMNYGTGRMTELLQAVQENLK
ENQLLRTGESGLGVMKTPTTDGGKEETSVQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400057201
Transcript Infomation

pacid=37432102 locus=PGSC0003DMG400022218 ID=PGSC0003DMT400057201.v4.03 annot-version=v4.03
Sequence

ATGAACCAACCTGTTCAAGGGGACAGCTCCAGCACCCCTGCTATCCTTCCTTTGAAGCGA
AGAAGGGGTCGCCCTCGTAAGGATCCTAGCTTAAAGCGTGTTGTTCGTGCTCAAGTTCCT
CCACCTTTTGAACTAGTGCAAGAGATCCAACCACAACAAGTAAATAGAAATGATGGAAAT
AATGTGATGATAGGCCAGGCTGTTACAGGCGTTGTTGAGTCTGCATTTGATGCTGGTTAT
TTGCTCAATGTTAGAATTGGTGACTCCAATACGAACTACAGGGGTGTTGTTTTTAAGCCA
GGACATTATATTCCTGTCACAGCTGCAAATGATGTCGCCCCACATCTTCAGATGATCAGA
AGAAATGAGGTTCGTCCTCCGGCTGTAAACCAGCGTAATGGATCAGTTAAGCTTGGATCT
AGGTCCTCAAAAAGCAAACAGGTAGTAATGCATCCCTCAGTCCCTCCAGTGGGTGCCAGA
GGCACAGTAGTTCCTGTTGTGCTACAGCCTGTCAATTTGACAAATGGACTAGCATCTAGT
CAGAGTTCTGCATCCCAAGCTTCAAACAGGGAGTCTTCAAGGGAGAAAGATGTTCAGATG
GTTAAGCCATTGGCTATGCTGCCACCTGATGGACCAGTAACCCCTGGACAGCTACCACCA
GAACCAACTCGTGAAACACTTGCTTCACAAGCTCAAGTTGGCAACAAAGTAGCAATAGGT
ACTGGGCAGAAAGAAGATGGCTATCTTAGCAAGGGAGCAGAAGCTGTGAAAGAGGAAGAG
GTGCAGCCAGCTGTATCAACCAACGTAGCAATACCTGTTGCAGTGGCCAACGTGTCTCAA
GGATCTGGGCTGTCACAAAAAGAAGATACTGGAAACAATGAAGCCTCTAACAAGTTGTCA
GCTGAACATTCACCTGTGATACCAAAACTAGATACTGTGAATCAGGTTCCCTCAGCAGAA
CCAAGTGAACCAGCAATCCCCGCTCTTCATACCCAGGCTACATCTGTTTCTAAGCCGCTG
ATGAACTATGGTACTGGCAGGATGACCGAACTTCTACAGGCTGTGCAGGAAAATCTGAAG
GAGAACCAGCTGCTTCGTACTGGAGAATCAGGACTTGGTGTAATGAAGACTCCAACAACT
GATGGCGGTAAGGAGGAGACTAGCGTTCAGTAG